RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
HDLBP-245ENST00000494862 TMTC3Q6ZXV5 915 aa13.34□□□□□ -0.27
HDLBP-245ENST00000494862 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
HDLBP-245ENST00000494862 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
HDLBP-245ENST00000494862 CTCFLQ8NI51 663 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-245ENST00000494862 GMLQ99445 158 aa13.34□□□□□ -0.27
HDLBP-245ENST00000494862 RNF26Q9BY78 433 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-245ENST00000494862 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
HDLBP-245ENST00000494862 ZNF646O15015 1829 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-245ENST00000494862 PSMD14O00487 310 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 PRPF3O43395 683 aaKnown RBP13.33□□□□□ -0.28
HDLBP-245ENST00000494862 RAD17O75943 681 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 KIF5BP33176 963 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 PTGER2P43116 358 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 AKAP17AQ02040 695 aaKnown RBP13.33□□□□□ -0.28
HDLBP-245ENST00000494862 FUT2Q10981 343 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 NFIAQ12857 509 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 KRT40Q6A162 431 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 CAVIN1Q6NZI2 390 aaKnown RBP13.33□□□□□ -0.28
HDLBP-245ENST00000494862 BRAPQ7Z569 592 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 LEO1Q8WVC0 666 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-245ENST00000494862 SPATA32Q96LK8 384 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 AIFM3Q96NN9 605 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 EHD4Q9H223 541 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 TAOK3Q9H2K8 898 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 DHX36Q9H2U1 1008 aaKnown RBP13.33□□□□□ -0.28
HDLBP-245ENST00000494862 TFIP11Q9UBB9 837 aaKnown RBP13.33□□□□□ -0.28
HDLBP-245ENST00000494862 HDAC9Q9UKV0 1011 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 FOCADQ5VW36 1801 aa13.33□□□□□ -0.28
HDLBP-245ENST00000494862 PLIN4Q96Q06 1357 aa13.32□□□□□ -0.28
HDLBP-245ENST00000494862 NOVP48745 357 aa13.32□□□□□ -0.28
HDLBP-245ENST00000494862 GNAQP50148 359 aa13.32□□□□□ -0.28
HDLBP-245ENST00000494862 KIF23Q02241 960 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-245ENST00000494862 GRM4Q14833 912 aa13.32□□□□□ -0.28
HDLBP-245ENST00000494862 PNMA1Q8ND90 353 aa13.32□□□□□ -0.28
HDLBP-245ENST00000494862 AGBL3Q8NEM8 1001 aa13.32□□□□□ -0.28
HDLBP-245ENST00000494862 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-245ENST00000494862 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-245ENST00000494862 FAM198AQ9UFP1 575 aa13.32□□□□□ -0.28
HDLBP-245ENST00000494862 SERPINB13Q9UIV8 391 aa13.32□□□□□ -0.28
HDLBP-245ENST00000494862 ISY1Q9ULR0 285 aaKnown RBP13.32□□□□□ -0.28
HDLBP-245ENST00000494862 PCDHAC2Q9Y5I4 1007 aa13.32□□□□□ -0.28
HDLBP-245ENST00000494862 MYH1P12882 1939 aa13.31□□□□□ -0.28
HDLBP-245ENST00000494862 ENTPD3O75355 529 aa13.31□□□□□ -0.28
HDLBP-245ENST00000494862 PLEKHA8P1O95397 391 aa13.31□□□□□ -0.28
HDLBP-245ENST00000494862 TOP1P11387 765 aaKnown RBP13.31□□□□□ -0.28
HDLBP-245ENST00000494862 GUCY1A2P33402 732 aa13.31□□□□□ -0.28
HDLBP-245ENST00000494862 ZFPM1Q8IX07 1006 aa13.31□□□□□ -0.28
HDLBP-245ENST00000494862 CMTR1Q8N1G2 835 aaKnown RBP13.31□□□□□ -0.28
HDLBP-245ENST00000494862 TMEM47Q9BQJ4 181 aa13.31□□□□□ -0.28
HDLBP-245ENST00000494862 GJB4Q9NTQ9 266 aa13.31□□□□□ -0.28
HDLBP-245ENST00000494862 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
HDLBP-245ENST00000494862 RCOR1Q9UKL0 485 aa13.31□□□□□ -0.28
HDLBP-245ENST00000494862 LTBP3Q9NS15 1303 aa13.31□□□□□ -0.28
HDLBP-245ENST00000494862 COL4A5P29400 1685 aa13.31□□□□□ -0.28
HDLBP-245ENST00000494862 ADAMTSL1Q8N6G6 1762 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 PSME4Q14997 1843 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 IGKV6D-41A0A0C4DH26 115 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 NFKBIEO00221 500 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 AKR1B1P15121 316 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 SHMT1P34896 483 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 ZNF445P59923 1031 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 SAFBQ15424 915 aaKnown RBP eCLIP13.3□□□□□ -0.28
HDLBP-245ENST00000494862 MYSM1Q5VVJ2 828 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 FOXP4Q8IVH2 680 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-245ENST00000494862 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 CCDC82Q8N4S0 544 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 OGFOD1Q8N543 542 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 SRBD1Q8N5C6 995 aaKnown RBP13.3□□□□□ -0.28
HDLBP-245ENST00000494862 MTMR14Q8NCE2 650 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 CEP95Q96GE4 821 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 PRMT6Q96LA8 375 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-245ENST00000494862 CCDC17Q96LX7 622 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 USP28Q96RU2 1077 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 LZTS2Q9BRK4 669 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.3□□□□□ -0.28
HDLBP-245ENST00000494862 RTEL1Q9NZ71 1219 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 TMEM63CQ9P1W3 806 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 PI4KBQ9UBF8 816 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 CNTNAP5Q8WYK1 1306 aa13.3□□□□□ -0.28
HDLBP-245ENST00000494862 COL2A1P02458 1487 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-245ENST00000494862 FSD2A1L4K1 749 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 KIF28PB7ZC32 967 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 UBE2Q2LH0YL09 131 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 MMP1P03956 469 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
HDLBP-245ENST00000494862 XBP1P17861 261 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 U2AF2P26368 475 aaKnown RBP eCLIP13.29□□□□□ -0.28
HDLBP-245ENST00000494862 MMP14P50281 582 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 CACNB3P54284 484 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 CXCL9Q07325 125 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 TCP10Q12799 353 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 DLGAP5Q15398 846 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 PKN1Q16512 942 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 ZSCAN23Q3MJ62 389 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 CIAPIN1Q6FI81 312 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 SH3BP5LQ7L8J4 393 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 JDP2Q8WYK2 163 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 TDRD3Q9H7E2 651 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms