RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 UBE2Q2LH0YL09 131 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 SMIM22K7EJ46 135 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 BAG3O95817 575 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 BMP15O95972 392 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 SERPINB2P05120 415 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 GYS1P13807 737 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 PTPREP23469 700 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 KRT2P35908 639 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 DRC7Q8IY82 874 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 AOPEPQ8N6M6 819 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 CTCFLQ8NI51 663 aaPredicted RBP12.9□□□□□ -0.34
LDHA-211ENST00000494573 BRMS1Q9HCU9 246 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 FAM13BQ9NYF5 915 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 FBXO2Q9UK22 296 aaPredicted RBP12.9□□□□□ -0.34
LDHA-211ENST00000494573 IKBKBO14920 756 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 NEMFO60524 1076 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 PRDM1O75626 825 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 PTGS1P23219 599 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 HOXA10P31260 410 aaPredicted RBP12.89□□□□□ -0.35
LDHA-211ENST00000494573 USP5P45974 858 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 GPSM2P81274 684 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 C12orf60Q5U649 245 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 KRBA2Q6ZNG9 492 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 TMC4Q7Z404 712 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 AMOTL1Q8IY63 956 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 CRAMP1Q96RY5 1269 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 PODXL2Q9NZ53 605 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 CLIP2Q9UDT6 1046 aa12.89□□□□□ -0.35
LDHA-211ENST00000494573 HOOK1Q9UJC3 728 aaKnown RBP12.89□□□□□ -0.35
LDHA-211ENST00000494573 R3HCC1Q9Y3T6 440 aaKnown RBP12.89□□□□□ -0.35
LDHA-211ENST00000494573 SRPRBQ9Y5M8 271 aaKnown RBP12.89□□□□□ -0.35
LDHA-211ENST00000494573 MYO1BO43795 1136 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 BBOX1O75936 387 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 PLEKHA8P1O95397 391 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 CYP2D6P10635 497 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 IL1R1P14778 569 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 KIF5BP33176 963 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 DHX8Q14562 1220 aaKnown RBP12.88□□□□□ -0.35
LDHA-211ENST00000494573 DPCR1Q3MIW9 517 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 CCDC186Q7Z3E2 898 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 DGKHQ86XP1 1220 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 CMTR1Q8N1G2 835 aaKnown RBP12.88□□□□□ -0.35
LDHA-211ENST00000494573 MPNDQ8N594 471 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 CLIC6Q96NY7 704 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 TCP11L1Q9NUJ3 509 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 MCM9Q9NXL9 1143 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
LDHA-211ENST00000494573 GGA1Q9UJY5 639 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 KCNH3Q9ULD8 1083 aa12.88□□□□□ -0.35
LDHA-211ENST00000494573 RGPD3A6NKT7 1758 aaPredicted RBP12.87□□□□□ -0.35
LDHA-211ENST00000494573 RGPD4Q7Z3J3 1758 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 KLRG2A4D1S0 409 aaPredicted RBP12.87□□□□□ -0.35
LDHA-211ENST00000494573 TRIM75PA6NK02 468 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 TSPY2A6NKD2 308 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 HSPA1LP34931 641 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 NR5A1Q13285 461 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 KANK3Q6NY19 840 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 CCDC82Q8N4S0 544 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 SH3RF3Q8TEJ3 882 aaPredicted RBP12.87□□□□□ -0.35
LDHA-211ENST00000494573 TBC1D22AQ8WUA7 517 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 TNFRSF25Q93038 417 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 SHISA4Q96DD7 197 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 CD209Q9NNX6 404 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 PYCARDQ9ULZ3 195 aa12.87□□□□□ -0.35
LDHA-211ENST00000494573 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
LDHA-211ENST00000494573 COL11A2P13942 1736 aaPredicted RBP12.87□□□□□ -0.35
LDHA-211ENST00000494573 A0A087WWV3 80 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 UFL1O94874 794 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 USP17L8P0C7I0 530 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 PLCG2P16885 1265 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 GNAQP50148 359 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 GRM4Q14833 912 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 FAM47AQ5JRC9 791 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 RCSD1Q6JBY9 416 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 METTL16Q86W50 562 aaKnown RBP12.86□□□□□ -0.35
LDHA-211ENST00000494573 FAM177A1Q8N128 213 aaPredicted RBP12.86□□□□□ -0.35
LDHA-211ENST00000494573 SRBD1Q8N5C6 995 aaKnown RBP12.86□□□□□ -0.35
LDHA-211ENST00000494573 CNNM3Q8NE01 707 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 ERCC4Q92889 916 aaPredicted RBP12.86□□□□□ -0.35
LDHA-211ENST00000494573 FAM163AQ96GL9 167 aaPredicted RBP12.86□□□□□ -0.35
LDHA-211ENST00000494573 PRIMPOLQ96LW4 560 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 RTFDC1Q9BY42 306 aaPredicted RBP12.86□□□□□ -0.35
LDHA-211ENST00000494573 KAT14Q9H8E8 782 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 SH3GLB2Q9NR46 395 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 VPS54Q9P1Q0 977 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 IMPACTQ9P2X3 320 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 PCDHB6Q9Y5E3 794 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 V9GY48 417 aaPredicted RBP12.86□□□□□ -0.35
LDHA-211ENST00000494573 FAM205AQ6ZU69 1335 aa12.86□□□□□ -0.35
LDHA-211ENST00000494573 GPR75-ASB3A0A0A6YYF3 556 aa12.85□□□□□ -0.35
LDHA-211ENST00000494573 POLRMTO00411 1230 aaKnown RBP12.85□□□□□ -0.35
LDHA-211ENST00000494573 SCG2P13521 617 aa12.85□□□□□ -0.35
LDHA-211ENST00000494573 TRAPPC10P48553 1259 aa12.85□□□□□ -0.35
LDHA-211ENST00000494573 GSDMDP57764 484 aa12.85□□□□□ -0.35
LDHA-211ENST00000494573 MDM2Q00987 491 aaPredicted RBP12.85□□□□□ -0.35
LDHA-211ENST00000494573 NCAPHQ15003 741 aa12.85□□□□□ -0.35
LDHA-211ENST00000494573 PFKFB3Q16875 520 aaPredicted RBP12.85□□□□□ -0.35
LDHA-211ENST00000494573 OLFM4Q6UX06 510 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms