RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 TACC3Q9Y6A5 838 aa27.94■■■□□ 2.06
CLIC3-203ENST00000494426 GREB1LQ9C091 1923 aaPredicted RBP27.94■■■□□ 2.06
CLIC3-203ENST00000494426 C19orf81C9J6K1 198 aa27.93■■■□□ 2.06
CLIC3-203ENST00000494426 MFAP1P55081 439 aaKnown RBP27.93■■■□□ 2.06
CLIC3-203ENST00000494426 SIAH1Q8IUQ4 282 aa27.93■■■□□ 2.06
CLIC3-203ENST00000494426 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.93■■■□□ 2.06
CLIC3-203ENST00000494426 MKNK2Q9HBH9 465 aa27.93■■■□□ 2.06
CLIC3-203ENST00000494426 AGTPBP1Q9UPW5 1226 aa27.93■■■□□ 2.06
CLIC3-203ENST00000494426 A0A1W2PRG0 241 aa27.92■■■□□ 2.06
CLIC3-203ENST00000494426 PRDM1O75626 825 aa27.92■■■□□ 2.06
CLIC3-203ENST00000494426 CTDSPL2Q05D32 466 aa27.92■■■□□ 2.06
CLIC3-203ENST00000494426 CLEC10AQ8IUN9 316 aa27.92■■■□□ 2.06
CLIC3-203ENST00000494426 EMILIN3Q9NT22 766 aa27.92■■■□□ 2.06
CLIC3-203ENST00000494426 ANAPC4Q9UJX5 808 aa27.92■■■□□ 2.06
CLIC3-203ENST00000494426 SLC45A1Q9Y2W3 748 aa27.92■■■□□ 2.06
CLIC3-203ENST00000494426 ZMYM6O95789 1325 aa27.92■■■□□ 2.06
CLIC3-203ENST00000494426 TLR2O60603 784 aa27.91■■■□□ 2.06
CLIC3-203ENST00000494426 INCENPQ9NQS7 918 aa27.91■■■□□ 2.06
CLIC3-203ENST00000494426 ADGRA2Q96PE1 1338 aa27.91■■■□□ 2.06
CLIC3-203ENST00000494426 CYP2C8P10632 490 aa27.9■■■□□ 2.06
CLIC3-203ENST00000494426 BMP2KLQ5H9B9 411 aa27.9■■■□□ 2.06
CLIC3-203ENST00000494426 USP17L2Q6R6M4 530 aa27.9■■■□□ 2.06
CLIC3-203ENST00000494426 KIAA1683Q9H0B3 1180 aa27.9■■■□□ 2.06
CLIC3-203ENST00000494426 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.9■■■□□ 2.06
CLIC3-203ENST00000494426 FKTNO75072 461 aa27.89■■■□□ 2.06
CLIC3-203ENST00000494426 TMOD4Q9NZQ9 345 aa27.89■■■□□ 2.06
CLIC3-203ENST00000494426 RAD50Q92878 1312 aa27.89■■■□□ 2.05
CLIC3-203ENST00000494426 SLC3A2P08195 630 aaKnown RBP27.88■■■□□ 2.05
CLIC3-203ENST00000494426 PDE4BQ07343 736 aa27.88■■■□□ 2.05
CLIC3-203ENST00000494426 ZYXQ15942 572 aaKnown RBP27.88■■■□□ 2.05
CLIC3-203ENST00000494426 C17orf99Q6UX52 265 aa27.88■■■□□ 2.05
CLIC3-203ENST00000494426 C12orf42Q96LP6 360 aa27.88■■■□□ 2.05
CLIC3-203ENST00000494426 DSCC1Q9BVC3 393 aa27.88■■■□□ 2.05
CLIC3-203ENST00000494426 ZNF287Q9HBT7 754 aa27.88■■■□□ 2.05
CLIC3-203ENST00000494426 ZNF444Q8N0Y2 327 aaPredicted RBP27.87■■■□□ 2.05
CLIC3-203ENST00000494426 RUFY2Q8WXA3 655 aa27.87■■■□□ 2.05
CLIC3-203ENST00000494426 PARK7Q99497 189 aaKnown RBP27.87■■■□□ 2.05
CLIC3-203ENST00000494426 FEZ1Q99689 392 aa27.87■■■□□ 2.05
CLIC3-203ENST00000494426 NBPF3Q9H094 633 aa27.87■■■□□ 2.05
CLIC3-203ENST00000494426 FGRP09769 529 aa27.86■■■□□ 2.05
CLIC3-203ENST00000494426 ICA1Q05084 483 aa27.86■■■□□ 2.05
CLIC3-203ENST00000494426 KANSL2Q9H9L4 492 aa27.86■■■□□ 2.05
CLIC3-203ENST00000494426 CPA4Q9UI42 421 aa27.86■■■□□ 2.05
CLIC3-203ENST00000494426 IGKV6D-41A0A0C4DH26 115 aa27.85■■■□□ 2.05
CLIC3-203ENST00000494426 SGSM2O43147 1006 aa27.85■■■□□ 2.05
CLIC3-203ENST00000494426 EEF2P13639 858 aaKnown RBP27.85■■■□□ 2.05
CLIC3-203ENST00000494426 HOXA7P31268 230 aaPredicted RBP27.85■■■□□ 2.05
CLIC3-203ENST00000494426 USP14P54578 494 aa27.85■■■□□ 2.05
CLIC3-203ENST00000494426 HAND2P61296 217 aa27.85■■■□□ 2.05
CLIC3-203ENST00000494426 CAP1Q01518 475 aa27.85■■■□□ 2.05
CLIC3-203ENST00000494426 SP3Q02447 781 aa27.85■■■□□ 2.05
CLIC3-203ENST00000494426 TMX2Q9Y320 296 aa27.85■■■□□ 2.05
CLIC3-203ENST00000494426 LAMA4Q16363 1823 aa27.85■■■□□ 2.05
CLIC3-203ENST00000494426 FAM47AQ5JRC9 791 aa27.84■■■□□ 2.05
CLIC3-203ENST00000494426 KIAA1755Q5JYT7 1200 aa27.84■■■□□ 2.05
CLIC3-203ENST00000494426 NEDD1Q8NHV4 660 aa27.84■■■□□ 2.05
CLIC3-203ENST00000494426 TFAP4Q01664 338 aa27.83■■■□□ 2.05
CLIC3-203ENST00000494426 PABPC4Q13310 644 aaKnown RBP eCLIP27.83■■■□□ 2.05
CLIC3-203ENST00000494426 ASCC2Q9H1I8 757 aaPredicted RBP27.83■■■□□ 2.05
CLIC3-203ENST00000494426 ARHGEF10LQ9HCE6 1279 aa27.83■■■□□ 2.05
CLIC3-203ENST00000494426 ORC4O43929 436 aa27.82■■■□□ 2.04
CLIC3-203ENST00000494426 BCRP11274 1271 aa27.82■■■□□ 2.04
CLIC3-203ENST00000494426 OSBPP22059 807 aa27.82■■■□□ 2.04
CLIC3-203ENST00000494426 PTH1RQ03431 593 aa27.82■■■□□ 2.04
CLIC3-203ENST00000494426 TBC1D10CQ8IV04 446 aa27.82■■■□□ 2.04
CLIC3-203ENST00000494426 PNMA3Q9UL41 463 aa27.82■■■□□ 2.04
CLIC3-203ENST00000494426 PLIN4Q96Q06 1357 aa27.82■■■□□ 2.04
CLIC3-203ENST00000494426 VCAM1P19320 739 aa27.81■■■□□ 2.04
CLIC3-203ENST00000494426 NKX2-3Q8TAU0 364 aa27.81■■■□□ 2.04
CLIC3-203ENST00000494426 CD99L2Q8TCZ2 262 aa27.81■■■□□ 2.04
CLIC3-203ENST00000494426 NYAP2Q9P242 653 aa27.81■■■□□ 2.04
CLIC3-203ENST00000494426 ZSWIM8A7E2V4 1837 aa27.81■■■□□ 2.04
CLIC3-203ENST00000494426 ZNF213O14771 459 aa27.8■■■□□ 2.04
CLIC3-203ENST00000494426 TSPY3P0CV98 308 aa27.8■■■□□ 2.04
CLIC3-203ENST00000494426 TSPY8P0CW00 308 aa27.8■■■□□ 2.04
CLIC3-203ENST00000494426 ATP2B2Q01814 1243 aa27.8■■■□□ 2.04
CLIC3-203ENST00000494426 CEP95Q96GE4 821 aa27.8■■■□□ 2.04
CLIC3-203ENST00000494426 ERO1AQ96HE7 468 aa27.8■■■□□ 2.04
CLIC3-203ENST00000494426 P2RX7Q99572 595 aaKnown RBP27.8■■■□□ 2.04
CLIC3-203ENST00000494426 MTMR4Q9NYA4 1195 aa27.8■■■□□ 2.04
CLIC3-203ENST00000494426 MYH4Q9Y623 1939 aa27.79■■■□□ 2.04
CLIC3-203ENST00000494426 AKNAD1Q5T1N1 836 aa27.79■■■□□ 2.04
CLIC3-203ENST00000494426 CATSPERGQ6ZRH7 1159 aa27.79■■■□□ 2.04
CLIC3-203ENST00000494426 CTU1Q7Z7A3 348 aaKnown RBP27.79■■■□□ 2.04
CLIC3-203ENST00000494426 SMCR8Q8TEV9 937 aaPredicted RBP27.79■■■□□ 2.04
CLIC3-203ENST00000494426 STAG1Q8WVM7 1258 aa27.79■■■□□ 2.04
CLIC3-203ENST00000494426 VCPKMTQ9H867 229 aa27.79■■■□□ 2.04
CLIC3-203ENST00000494426 USP17L15C9J2P7 530 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 USP17L13C9JLJ4 530 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 USP17L11C9JVI0 530 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 USP17L18D6R9N7 530 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 USP17L22D6RA61 530 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 USP17L17D6RBQ6 530 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 USP17L19D6RCP7 530 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 USP17L20D6RJB6 530 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 USP17L24Q0WX57 530 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 POTEEQ6S8J3 1075 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 ESYT1Q9BSJ8 1104 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 SH2D4AQ9H788 454 aa27.78■■■□□ 2.04
CLIC3-203ENST00000494426 IL17RBQ9NRM6 502 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms