RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 FAM43AQ8N2R8 423 aa12□□□□□ -0.49
RFC2-211ENST00000494019 PTPN18Q99952 460 aa12□□□□□ -0.49
RFC2-211ENST00000494019 WDR18Q9BV38 432 aa12□□□□□ -0.49
RFC2-211ENST00000494019 NBPF3Q9H094 633 aa12□□□□□ -0.49
RFC2-211ENST00000494019 ANO2Q9NQ90 1003 aa12□□□□□ -0.49
RFC2-211ENST00000494019 RNF186Q9NXI6 227 aa12□□□□□ -0.49
RFC2-211ENST00000494019 CTNNA3Q9UI47 895 aa12□□□□□ -0.49
RFC2-211ENST00000494019 TSKSQ9UJT2 592 aa12□□□□□ -0.49
RFC2-211ENST00000494019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12□□□□□ -0.49
RFC2-211ENST00000494019 PLIN4Q96Q06 1357 aa12□□□□□ -0.49
RFC2-211ENST00000494019 TSPY2A6NKD2 308 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 BTBD19C9JJ37 291 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 USP17L10C9JJH3 530 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 CA12O43570 354 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 TRPA1O75762 1119 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 ALDH1A1P00352 501 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 FAM47AQ5JRC9 791 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 RRP12Q5JTH9 1297 aaKnown RBP11.99□□□□□ -0.49
RFC2-211ENST00000494019 AKNAD1Q5T1N1 836 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 MFSD6Q6ZSS7 791 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 FASTKD5Q7L8L6 764 aaKnown RBP11.99□□□□□ -0.49
RFC2-211ENST00000494019 STAG1Q8WVM7 1258 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 RNF41Q9H4P4 317 aaPredicted RBP11.99□□□□□ -0.49
RFC2-211ENST00000494019 ARHGEF10LQ9HCE6 1279 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 INCENPQ9NQS7 918 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 SAGE1Q9NXZ1 904 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 GTF3C3Q9Y5Q9 886 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 TACC3Q9Y6A5 838 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 U3KPZ7 1027 aaPredicted RBP11.99□□□□□ -0.49
RFC2-211ENST00000494019 NEDD4P46934 1319 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 RLFQ13129 1914 aa11.99□□□□□ -0.49
RFC2-211ENST00000494019 A0A0G2JMZ2 1700 aa11.98□□□□□ -0.49
RFC2-211ENST00000494019 FOXN1O15353 648 aa11.98□□□□□ -0.49
RFC2-211ENST00000494019 ORC4O43929 436 aa11.98□□□□□ -0.49
RFC2-211ENST00000494019 RANBP6O60518 1105 aaKnown RBP11.98□□□□□ -0.49
RFC2-211ENST00000494019 PCP11498 1178 aaKnown RBP11.98□□□□□ -0.49
RFC2-211ENST00000494019 BACE1P56817 501 aa11.98□□□□□ -0.49
RFC2-211ENST00000494019 ATP2B2Q01814 1243 aa11.98□□□□□ -0.49
RFC2-211ENST00000494019 MOGSQ13724 837 aa11.98□□□□□ -0.49
RFC2-211ENST00000494019 TAF1CQ15572 869 aaPredicted RBP11.98□□□□□ -0.49
RFC2-211ENST00000494019 ANKRD23Q86SG2 305 aa11.98□□□□□ -0.49
RFC2-211ENST00000494019 PROCA1Q8NCQ7 364 aaPredicted RBP11.98□□□□□ -0.49
RFC2-211ENST00000494019 ACER1Q8TDN7 264 aa11.98□□□□□ -0.49
RFC2-211ENST00000494019 LSG1Q9H089 658 aaKnown RBP11.98□□□□□ -0.49
RFC2-211ENST00000494019 KANSL2Q9H9L4 492 aa11.98□□□□□ -0.49
RFC2-211ENST00000494019 TMOD4Q9NZQ9 345 aa11.98□□□□□ -0.49
RFC2-211ENST00000494019 RBM8AQ9Y5S9 174 aaKnown RBP11.98□□□□□ -0.49
RFC2-211ENST00000494019 C19orf81C9J6K1 198 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 PDHXO00330 501 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 CYP21A2P08686 494 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 FGRP09769 529 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 EEF2P13639 858 aaKnown RBP11.97□□□□□ -0.49
RFC2-211ENST00000494019 USP14P54578 494 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 TFAP4Q01664 338 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 SH3D19Q5HYK7 790 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 TREML2Q5T2D2 321 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 NEDD1Q8NHV4 660 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 MAP4K1Q92918 833 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.97□□□□□ -0.49
RFC2-211ENST00000494019 KIAA1683Q9H0B3 1180 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 SH2D4AQ9H788 454 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 ZCCHC17Q9NP64 241 aaKnown RBP11.97□□□□□ -0.49
RFC2-211ENST00000494019 AGTPBP1Q9UPW5 1226 aa11.97□□□□□ -0.49
RFC2-211ENST00000494019 MYH6P13533 1939 aa11.96□□□□□ -0.49
RFC2-211ENST00000494019 IGKV6D-41A0A0C4DH26 115 aa11.96□□□□□ -0.49
RFC2-211ENST00000494019 A0A1W2PRG0 241 aa11.96□□□□□ -0.49
RFC2-211ENST00000494019 TBC1D8O95759 1140 aa11.96□□□□□ -0.49
RFC2-211ENST00000494019 HSPA8P11142 646 aaKnown RBP11.96□□□□□ -0.49
RFC2-211ENST00000494019 CTCFP49711 727 aaPredicted RBP11.96□□□□□ -0.49
RFC2-211ENST00000494019 CRHR2Q13324 411 aa11.96□□□□□ -0.49
RFC2-211ENST00000494019 GPAT2Q6NUI2 795 aa11.96□□□□□ -0.49
RFC2-211ENST00000494019 USP17L2Q6R6M4 530 aa11.96□□□□□ -0.49
RFC2-211ENST00000494019 CEP95Q96GE4 821 aa11.96□□□□□ -0.49
RFC2-211ENST00000494019 B4E1Z4 1266 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 RAD21O60216 631 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 NMT2O60551 498 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 VCAM1P19320 739 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 ESR2Q92731 530 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 C12orf42Q96LP6 360 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 PARK7Q99497 189 aaKnown RBP11.95□□□□□ -0.5
RFC2-211ENST00000494019 CNNM2Q9H8M5 875 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 ZFYVE28Q9HCC9 887 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 GOPCQ9HD26 462 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 EMILIN3Q9NT22 766 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 TMX2Q9Y320 296 aa11.95□□□□□ -0.5
RFC2-211ENST00000494019 KDM4AO75164 1064 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 REC8O95072 547 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 TTLL1O95922 423 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 CYP2C8P10632 490 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 LBX1P52954 281 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 IRX3P78415 501 aaPredicted RBP11.94□□□□□ -0.5
RFC2-211ENST00000494019 PABPC4Q13310 644 aaKnown RBP eCLIP11.94□□□□□ -0.5
RFC2-211ENST00000494019 SIAH1Q8IUQ4 282 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 SPICE1Q8N0Z3 855 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 LRRC47Q8N1G4 583 aaKnown RBP11.94□□□□□ -0.5
RFC2-211ENST00000494019 SMCR8Q8TEV9 937 aaPredicted RBP11.94□□□□□ -0.5
RFC2-211ENST00000494019 CFHR5Q9BXR6 569 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 KRT23Q9C075 422 aa11.94□□□□□ -0.5
RFC2-211ENST00000494019 R3HDMLQ9H3Y0 253 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms