RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 GRIK5Q16478 980 aa9.35□□□□□ -0.91
RBM39-238ENST00000493853 ATP2B3Q16720 1220 aa9.35□□□□□ -0.91
RBM39-238ENST00000493853 HHIPL2Q6UWX4 724 aa9.35□□□□□ -0.91
RBM39-238ENST00000493853 ZNF775Q96BV0 537 aaPredicted RBP9.35□□□□□ -0.91
RBM39-238ENST00000493853 OPTNQ96CV9 577 aa9.35□□□□□ -0.91
RBM39-238ENST00000493853 CFHR5Q9BXR6 569 aa9.35□□□□□ -0.91
RBM39-238ENST00000493853 FKBPLQ9UIM3 349 aa9.35□□□□□ -0.91
RBM39-238ENST00000493853 LRRFIP2Q9Y608 721 aaKnown RBP9.35□□□□□ -0.91
RBM39-238ENST00000493853 POLR2AP24928 1970 aaKnown RBP9.35□□□□□ -0.91
RBM39-238ENST00000493853 SPEF2Q9C093 1822 aa9.35□□□□□ -0.91
RBM39-238ENST00000493853 CIAO1O76071 339 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 ADH1CP00326 375 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 LDHBP07195 334 aaKnown RBP9.34□□□□□ -0.91
RBM39-238ENST00000493853 GTF2A2P52657 109 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 ARHGEF6Q15052 776 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 DCAF15Q66K64 600 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 FBXO46Q6PJ61 603 aaPredicted RBP9.34□□□□□ -0.91
RBM39-238ENST00000493853 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 ATG9AQ7Z3C6 839 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 SH3RF1Q7Z6J0 888 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 ARHGAP45Q92619 1136 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 FRAT1Q92837 279 aaPredicted RBP9.34□□□□□ -0.91
RBM39-238ENST00000493853 ZDHHC15Q96MV8 337 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 CDK15Q96Q40 435 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 DENND2AQ9ULE3 1009 aa9.34□□□□□ -0.91
RBM39-238ENST00000493853 CACNA1FO60840 1977 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 CCL15-CCL14A0A0B4J2E2 113 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 IGF2BP3O00425 579 aaKnown RBP eCLIP9.33□□□□□ -0.92
RBM39-238ENST00000493853 CCL15Q16663 113 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 GORABQ5T7V8 394 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 FKBP1CQ5VVH2 108 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 APOBEC3HQ6NTF7 200 aaKnown RBP9.33□□□□□ -0.92
RBM39-238ENST00000493853 PDXDC2PQ6P474 469 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.33□□□□□ -0.92
RBM39-238ENST00000493853 FAM83AQ86UY5 434 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 ZGPATQ8N5A5 531 aaKnown RBP9.33□□□□□ -0.92
RBM39-238ENST00000493853 ERO1AQ96HE7 468 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 TEPSINQ96N21 525 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 MEIS3Q99687 375 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 R3HDMLQ9H3Y0 253 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 SENP2Q9HC62 589 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 PA2G4Q9UQ80 394 aaKnown RBP9.33□□□□□ -0.92
RBM39-238ENST00000493853 AKAP2Q9Y2D5 859 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 TRIM17Q9Y577 477 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 PSME4Q14997 1843 aa9.33□□□□□ -0.92
RBM39-238ENST00000493853 SRGAP3O43295 1099 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 SP3Q02447 781 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 TCP10Q12799 353 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 VGLL4Q14135 290 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 TMEM259Q4ZIN3 620 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 INTS3Q68E01 1043 aaKnown RBP9.32□□□□□ -0.92
RBM39-238ENST00000493853 MIGA2Q7L4E1 593 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 ERO1BQ86YB8 467 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 PNMA1Q8ND90 353 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 NEUROD6Q96NK8 337 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 WRNIP1Q96S55 665 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 ARHGAP9Q9BRR9 750 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 ZFYVE28Q9HCC9 887 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 COPRSQ9NQ92 184 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 USP40Q9NVE5 1235 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 CASP8AP2Q9UKL3 1982 aa9.32□□□□□ -0.92
RBM39-238ENST00000493853 GNAI2P04899 355 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 CETPP11597 493 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 PRDX5P30044 214 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 PHKA1P46020 1223 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 WDR4P57081 412 aaKnown RBP9.31□□□□□ -0.92
RBM39-238ENST00000493853 TIMM10P62072 90 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 G3BP1Q13283 466 aaKnown RBP eCLIP9.31□□□□□ -0.92
RBM39-238ENST00000493853 NR5A1Q13285 461 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 CRHR2Q13324 411 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 SNAPC2Q13487 334 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 TAF1CQ15572 869 aaPredicted RBP9.31□□□□□ -0.92
RBM39-238ENST00000493853 SPTY2D1Q68D10 685 aaPredicted RBP9.31□□□□□ -0.92
RBM39-238ENST00000493853 VASH1Q7L8A9 365 aaPredicted RBP9.31□□□□□ -0.92
RBM39-238ENST00000493853 DZIP1Q86YF9 867 aaKnown RBP9.31□□□□□ -0.92
RBM39-238ENST00000493853 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.31□□□□□ -0.92
RBM39-238ENST00000493853 EPS8L1Q8TE68 723 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 FAM151AQ8WW52 585 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 ZKSCAN4Q969J2 545 aaPredicted RBP9.31□□□□□ -0.92
RBM39-238ENST00000493853 CLUAP1Q96AJ1 413 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 C1QTNF2Q9BXJ5 285 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 ZNF341Q9BYN7 854 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 EFCC1Q9HA90 598 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 ABCF2Q9UG63 623 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 SSC5DA1L4H1 1573 aa9.31□□□□□ -0.92
RBM39-238ENST00000493853 TFCP2Q12800 502 aa9.3□□□□□ -0.92
RBM39-238ENST00000493853 MVPQ14764 893 aaKnown RBP9.3□□□□□ -0.92
RBM39-238ENST00000493853 KIF22Q14807 665 aa9.3□□□□□ -0.92
RBM39-238ENST00000493853 CCDC102BQ68D86 513 aa9.3□□□□□ -0.92
RBM39-238ENST00000493853 CDC42EP5Q6NZY7 148 aa9.3□□□□□ -0.92
RBM39-238ENST00000493853 ATF7IPQ6VMQ6 1270 aa9.3□□□□□ -0.92
RBM39-238ENST00000493853 OTOP1Q7RTM1 612 aa9.3□□□□□ -0.92
RBM39-238ENST00000493853 ZBTB33Q86T24 672 aa9.3□□□□□ -0.92
RBM39-238ENST00000493853 ZSCAN29Q8IWY8 852 aaPredicted RBP9.3□□□□□ -0.92
RBM39-238ENST00000493853 CD99L2Q8TCZ2 262 aa9.3□□□□□ -0.92
RBM39-238ENST00000493853 BRI3BPQ8WY22 251 aa9.3□□□□□ -0.92
RBM39-238ENST00000493853 KIFC2Q96AC6 838 aa9.3□□□□□ -0.92
RBM39-238ENST00000493853 PTPN18Q99952 460 aa9.3□□□□□ -0.92
RBM39-238ENST00000493853 HMX1Q9NP08 348 aaPredicted RBP9.3□□□□□ -0.92
RBM39-238ENST00000493853 DAGLAQ9Y4D2 1042 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms