RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 POLR2MP0CAP2 368 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 CCDC192P0DO97 292 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 RFX5P48382 616 aaPredicted RBP7.16□□□□□ -1.26
NF1-215ENST00000493220 CDK8P49336 464 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 NCBP1Q09161 790 aaKnown RBP7.16□□□□□ -1.26
NF1-215ENST00000493220 GNPTABQ3T906 1256 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 FAM177A1Q8N128 213 aaPredicted RBP7.16□□□□□ -1.26
NF1-215ENST00000493220 PNMA1Q8ND90 353 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 MAP4K1Q92918 833 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 PAGR1Q9BTK6 254 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 PUS7LQ9H0K6 701 aaKnown RBP7.16□□□□□ -1.26
NF1-215ENST00000493220 RMND1Q9NWS8 449 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 ALX1Q15699 326 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 FBXO11Q86XK2 927 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 STAG1Q8WVM7 1258 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 LSG1Q9H089 658 aaKnown RBP7.16□□□□□ -1.26
NF1-215ENST00000493220 NUP62CLQ9H1M0 184 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 GPC2Q8N158 579 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 ZNF70Q9UC06 446 aaPredicted RBP7.16□□□□□ -1.26
NF1-215ENST00000493220 SMTNL1A8MU46 457 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 PRDX5P30044 214 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 KCTD2Q14681 263 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 CCDC150Q8NCX0 1101 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 STRBPQ96SI9 672 aaKnown RBP7.16□□□□□ -1.26
NF1-215ENST00000493220 TSPY26PQ9H489 355 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 FEM1BQ9UK73 627 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 ZEB2O60315 1214 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 ECM2O94769 699 aaPredicted RBP7.16□□□□□ -1.26
NF1-215ENST00000493220 IL1R1P14778 569 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 ARHGEF16Q5VV41 709 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 NCAPG2Q86XI2 1143 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 SEC62Q99442 399 aaKnown RBP7.16□□□□□ -1.26
NF1-215ENST00000493220 MTA3Q9BTC8 594 aa7.16□□□□□ -1.26
NF1-215ENST00000493220 WDR19Q8NEZ3 1342 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 SALL1Q9NSC2 1324 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 CBFA2T2O43439 604 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 FDX1P10109 184 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 BMP3P12645 472 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 STAT2P52630 851 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 KRT79Q5XKE5 535 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 PI16Q6UXB8 463 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 LRRC47Q8N1G4 583 aaKnown RBP7.15□□□□□ -1.26
NF1-215ENST00000493220 OSBP2Q969R2 916 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 NSUN4Q96CB9 384 aaKnown RBP7.15□□□□□ -1.26
NF1-215ENST00000493220 TCEANC2Q96MN5 208 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 WRNIP1Q96S55 665 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 LARP6Q9BRS8 491 aaKnown RBP7.15□□□□□ -1.26
NF1-215ENST00000493220 TMEM232C9JQI7 657 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 GDF11O95390 407 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 HOXD10P28358 340 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 NONOQ15233 471 aaKnown RBP eCLIP7.15□□□□□ -1.26
NF1-215ENST00000493220 SYCP1Q15431 976 aa7.15□□□□□ -1.26
NF1-215ENST00000493220 C15orf52Q6ZUT6 534 aaKnown RBP7.15□□□□□ -1.26
NF1-215ENST00000493220 IPO4Q8TEX9 1081 aaKnown RBP7.15□□□□□ -1.26
NF1-215ENST00000493220 V9GY48 417 aaPredicted RBP7.15□□□□□ -1.26
NF1-215ENST00000493220 SREBF2Q12772 1141 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 HAUS3Q68CZ6 603 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 CDC37L1Q7L3B6 337 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 FERMT3Q86UX7 667 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 SMARCE1Q969G3 411 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 OSBPL5Q9H0X9 879 aaPredicted RBP7.15□□□□□ -1.27
NF1-215ENST00000493220 HOXC10Q9NYD6 342 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 ADD3Q9UEY8 706 aaKnown RBP7.15□□□□□ -1.27
NF1-215ENST00000493220 POLLQ9UGP5 575 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 CCPG1Q9ULG6 757 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 DAGLAQ9Y4D2 1042 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 DOT1LQ8TEK3 1739 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 NOP56O00567 594 aaKnown RBP7.15□□□□□ -1.27
NF1-215ENST00000493220 FOSP01100 380 aaPredicted RBP7.15□□□□□ -1.27
NF1-215ENST00000493220 EPHX2P34913 555 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 USH1GQ495M9 461 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 RILPL1Q5EBL4 403 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 SYDE2Q5VT97 1194 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 USP50Q70EL3 339 aaPredicted RBP7.15□□□□□ -1.27
NF1-215ENST00000493220 FAM151AQ8WW52 585 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 ZSWIM6Q9HCJ5 1215 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 KCPQ6ZWJ8 1503 aa7.15□□□□□ -1.27
NF1-215ENST00000493220 FRMPD2Q68DX3 1309 aaPredicted RBP7.15□□□□□ -1.27
NF1-215ENST00000493220 RASSF7Q02833 373 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 PTH1RQ03431 593 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 RCSD1Q6JBY9 416 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 MIGA2Q7L4E1 593 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 CPXCR1Q8N123 301 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 CNNM3Q8NE01 707 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 TXLNBQ8N3L3 684 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 RBM46Q8TBY0 533 aaKnown RBP7.14□□□□□ -1.27
NF1-215ENST00000493220 RXRAP19793 462 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 PDE4DQ08499 809 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 NSMFQ6X4W1 530 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 ANKRD35Q8N283 1001 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 FANCBQ8NB91 859 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 AMNQ9BXJ7 453 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 AZI2Q9H6S1 392 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 DDX19AQ9NUU7 478 aaKnown RBP7.14□□□□□ -1.27
NF1-215ENST00000493220 FBXO40Q9UH90 709 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 PKD1L3Q7Z443 1732 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 KLRF2D3W0D1 207 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 PRKAB2O43741 272 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 STAT6P42226 847 aa7.14□□□□□ -1.27
NF1-215ENST00000493220 DTHD1Q6ZMT9 781 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms