RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
CDC42SE1-206ENST00000492796 USP17L2Q6R6M4 530 aa12.72□□□□□ -0.37
CDC42SE1-206ENST00000492796 C17orf99Q6UX52 265 aa12.72□□□□□ -0.37
CDC42SE1-206ENST00000492796 CCDC129Q6ZRS4 1044 aa12.72□□□□□ -0.37
CDC42SE1-206ENST00000492796 C12orf42Q96LP6 360 aa12.72□□□□□ -0.37
CDC42SE1-206ENST00000492796 FAM227BQ96M60 508 aa12.72□□□□□ -0.37
CDC42SE1-206ENST00000492796 FEZ1Q99689 392 aa12.72□□□□□ -0.37
CDC42SE1-206ENST00000492796 KIAA1683Q9H0B3 1180 aa12.72□□□□□ -0.37
CDC42SE1-206ENST00000492796 CCDC171Q6TFL3 1326 aa12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 SMIM22K7EJ46 135 aa12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 CENPBP07199 599 aaPredicted RBP12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 SLC3A2P08195 630 aaKnown RBP12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 CYP2C8P10632 490 aa12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 AKR1B1P15121 316 aa12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 OSBPP22059 807 aa12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 GUCY1A2P33402 732 aa12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 SEPT2Q15019 361 aa12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 CD99L2Q8TCZ2 262 aa12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 SMCR8Q8TEV9 937 aaPredicted RBP12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 DIAPH3Q9NSV4 1193 aa12.71□□□□□ -0.37
CDC42SE1-206ENST00000492796 FOXP2O15409 715 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 GNRH1P01148 92 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 BCRP11274 1271 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 GSPT1P15170 499 aaKnown RBP12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 ICA1Q05084 483 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 PDE4BQ07343 736 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 PPARAQ07869 468 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 KIF22Q14807 665 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 ALX1Q15699 326 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 OTOP1Q7RTM1 612 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 ABHD8Q96I13 439 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 SH2D4AQ9H788 454 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 MKNK2Q9HBH9 465 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 ARHGEF10LQ9HCE6 1279 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 EMILIN3Q9NT22 766 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 CPA4Q9UI42 421 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 MGAMO43451 1857 aa12.7□□□□□ -0.38
CDC42SE1-206ENST00000492796 LAMA4Q16363 1823 aa12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 HSPD1P10809 573 aaKnown RBP12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 RASA1P20936 1047 aa12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 GCLCP48506 637 aaPredicted RBP12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 IRX3P78415 501 aaPredicted RBP12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 LACTBP83111 547 aaPredicted RBP12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 VPS53Q5VIR6 699 aa12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 FBXO46Q6PJ61 603 aaPredicted RBP12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 ZNF589Q86UQ0 364 aaPredicted RBP12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 ACER1Q8TDN7 264 aa12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 GTF3C2Q8WUA4 911 aaPredicted RBP12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 ASCC2Q9H1I8 757 aaPredicted RBP12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 KANSL2Q9H9L4 492 aa12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 PCDH10Q9P2E7 1040 aa12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 ANAPC4Q9UJX5 808 aa12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 TRIM17Q9Y577 477 aa12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 ZSWIM8A7E2V4 1837 aa12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 PLIN4Q96Q06 1357 aa12.69□□□□□ -0.38
CDC42SE1-206ENST00000492796 VCAM1P19320 739 aa12.68□□□□□ -0.38
CDC42SE1-206ENST00000492796 ZYXQ15942 572 aaKnown RBP12.68□□□□□ -0.38
CDC42SE1-206ENST00000492796 FAM110CQ1W6H9 321 aa12.68□□□□□ -0.38
CDC42SE1-206ENST00000492796 CWC27Q6UX04 472 aaKnown RBP12.68□□□□□ -0.38
CDC42SE1-206ENST00000492796 LPAR1Q92633 364 aa12.68□□□□□ -0.38
CDC42SE1-206ENST00000492796 TMX2Q9Y320 296 aa12.68□□□□□ -0.38
CDC42SE1-206ENST00000492796 RAD50Q92878 1312 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 A0A1W2PRG0 241 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 USP17L15C9J2P7 530 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 USP17L13C9JLJ4 530 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 USP17L11C9JVI0 530 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 USP17L18D6R9N7 530 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 USP17L22D6RA61 530 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 USP17L17D6RBQ6 530 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 USP17L19D6RCP7 530 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 USP17L20D6RJB6 530 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 PRMT2P55345 433 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 USP17L24Q0WX57 530 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 ZNF444Q8N0Y2 327 aaPredicted RBP12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 STK11IPQ8N1F8 1099 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 CCDC136Q96JN2 1154 aa12.67□□□□□ -0.38
CDC42SE1-206ENST00000492796 MYH4Q9Y623 1939 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 A0A0G2JMZ2 1700 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 PRDM1O75626 825 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 FGAP02671 866 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 EEF2P13639 858 aaKnown RBP12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 FCGRTP55899 365 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 HERVK_113P62684 666 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 CLEC10AQ8IUN9 316 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 ANKRD13CQ8N6S4 541 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 VCPKMTQ9H867 229 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 MORF4L1Q9UBU8 362 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 HPS5Q9UPZ3 1129 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 PTPN22Q9Y2R2 807 aa12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDC42SE1-206ENST00000492796 PARP14Q460N5 1801 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 IGKV6D-41A0A0C4DH26 115 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 FGRP09769 529 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 TSPY3P0CV98 308 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 TSPY8P0CW00 308 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 PCP11498 1178 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms