RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 USP17L24Q0WX57 530 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 OS9Q13438 667 aaPredicted RBP13.46□□□□□ -0.25
SND1-215ENST00000492772 FAM109BQ6ICB4 259 aaPredicted RBP13.46□□□□□ -0.25
SND1-215ENST00000492772 EDC3Q96F86 508 aaKnown RBP13.46□□□□□ -0.25
SND1-215ENST00000492772 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.25
SND1-215ENST00000492772 DBNDD2Q9BQY9 259 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 EHD4Q9H223 541 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 IVNS1ABPQ9Y6Y0 642 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 DNAH12Q6ZR08 3092 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 UNC80Q8N2C7 3258 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 NAV1Q8NEY1 1877 aa13.45□□□□□ -0.26
SND1-215ENST00000492772 SLC15A5A6NIM6 579 aa13.45□□□□□ -0.26
SND1-215ENST00000492772 CNMDO75829 334 aa13.45□□□□□ -0.26
SND1-215ENST00000492772 HOXC6P09630 235 aa13.45□□□□□ -0.26
SND1-215ENST00000492772 TATDN1Q6P1N9 297 aa13.45□□□□□ -0.26
SND1-215ENST00000492772 POTEEQ6S8J3 1075 aa13.45□□□□□ -0.26
SND1-215ENST00000492772 LBX2Q6XYB7 198 aa13.45□□□□□ -0.26
SND1-215ENST00000492772 KIAA1683Q9H0B3 1180 aa13.45□□□□□ -0.26
SND1-215ENST00000492772 DDX20Q9UHI6 824 aaKnown RBP13.45□□□□□ -0.26
SND1-215ENST00000492772 A0A0G2JMZ2 1700 aa13.44□□□□□ -0.26
SND1-215ENST00000492772 VCAM1P19320 739 aa13.44□□□□□ -0.26
SND1-215ENST00000492772 CYP7A1P22680 504 aa13.44□□□□□ -0.26
SND1-215ENST00000492772 PTPREP23469 700 aa13.44□□□□□ -0.26
SND1-215ENST00000492772 ZAP70P43403 619 aa13.44□□□□□ -0.26
SND1-215ENST00000492772 POLA2Q14181 598 aa13.44□□□□□ -0.26
SND1-215ENST00000492772 GRB14Q14449 540 aa13.44□□□□□ -0.26
SND1-215ENST00000492772 ZYXQ15942 572 aaKnown RBP13.44□□□□□ -0.26
SND1-215ENST00000492772 WDR78Q5VTH9 848 aa13.44□□□□□ -0.26
SND1-215ENST00000492772 TMED8Q6PL24 325 aaPredicted RBP13.44□□□□□ -0.26
SND1-215ENST00000492772 LPAR1Q92633 364 aa13.44□□□□□ -0.26
SND1-215ENST00000492772 SENP6Q9GZR1 1112 aaPredicted RBP13.44□□□□□ -0.26
SND1-215ENST00000492772 PIH1D3Q9NQM4 214 aaKnown RBP13.44□□□□□ -0.26
SND1-215ENST00000492772 PRKAG2Q9UGJ0 569 aa13.44□□□□□ -0.26
SND1-215ENST00000492772 SERPINB13Q9UIV8 391 aa13.44□□□□□ -0.26
SND1-215ENST00000492772 DNM1LO00429 736 aa13.43□□□□□ -0.26
SND1-215ENST00000492772 USP5P45974 858 aa13.43□□□□□ -0.26
SND1-215ENST00000492772 DYNLL1P63167 89 aaKnown RBP13.43□□□□□ -0.26
SND1-215ENST00000492772 ATP2B2Q01814 1243 aa13.43□□□□□ -0.26
SND1-215ENST00000492772 RAB3GAP1Q15042 981 aa13.43□□□□□ -0.26
SND1-215ENST00000492772 CATSPERGQ6ZRH7 1159 aa13.43□□□□□ -0.26
SND1-215ENST00000492772 TTC6Q86TZ1 520 aa13.43□□□□□ -0.26
SND1-215ENST00000492772 SSH3Q8TE77 659 aa13.43□□□□□ -0.26
SND1-215ENST00000492772 FLRT1Q9NZU1 646 aa13.43□□□□□ -0.26
SND1-215ENST00000492772 LAMA2P24043 3122 aaKnown RBP13.43□□□□□ -0.26
SND1-215ENST00000492772 RLFQ13129 1914 aa13.43□□□□□ -0.26
SND1-215ENST00000492772 POTEB2H3BUK9 544 aa13.42□□□□□ -0.26
SND1-215ENST00000492772 IDH1O75874 414 aaKnown RBP13.42□□□□□ -0.26
SND1-215ENST00000492772 CNGA1P29973 690 aa13.42□□□□□ -0.26
SND1-215ENST00000492772 ABCB5Q2M3G0 1257 aa13.42□□□□□ -0.26
SND1-215ENST00000492772 CERKLQ49MI3 558 aaPredicted RBP13.42□□□□□ -0.26
SND1-215ENST00000492772 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.42□□□□□ -0.26
SND1-215ENST00000492772 FRAT1Q92837 279 aaPredicted RBP13.42□□□□□ -0.26
SND1-215ENST00000492772 GUCD1Q96NT3 240 aa13.42□□□□□ -0.26
SND1-215ENST00000492772 CABP5Q9NP86 173 aa13.42□□□□□ -0.26
SND1-215ENST00000492772 DBNLQ9UJU6 430 aaKnown RBP13.42□□□□□ -0.26
SND1-215ENST00000492772 NDUFB9Q9Y6M9 179 aa13.42□□□□□ -0.26
SND1-215ENST00000492772 SPDYE16A6NNV3 312 aaPredicted RBP13.41□□□□□ -0.26
SND1-215ENST00000492772 SURF6O75683 361 aaKnown RBP13.41□□□□□ -0.26
SND1-215ENST00000492772 CYBAP13498 195 aa13.41□□□□□ -0.26
SND1-215ENST00000492772 ATN1P54259 1190 aaPredicted RBP13.41□□□□□ -0.26
SND1-215ENST00000492772 RTP1P59025 263 aa13.41□□□□□ -0.26
SND1-215ENST00000492772 ZNF697Q5TEC3 545 aa13.41□□□□□ -0.26
SND1-215ENST00000492772 MIGA1Q8NAN2 632 aa13.41□□□□□ -0.26
SND1-215ENST00000492772 CLUAP1Q96AJ1 413 aa13.41□□□□□ -0.26
SND1-215ENST00000492772 RPAP3Q9H6T3 665 aaPredicted RBP13.41□□□□□ -0.26
SND1-215ENST00000492772 BTBD7Q9P203 1132 aa13.41□□□□□ -0.26
SND1-215ENST00000492772 TNNQ9UQP3 1299 aa13.41□□□□□ -0.26
SND1-215ENST00000492772 KBTBD13C9JR72 458 aa13.4□□□□□ -0.26
SND1-215ENST00000492772 CYP2C19P33261 490 aa13.4□□□□□ -0.26
SND1-215ENST00000492772 ATP8B2P98198 1209 aa13.4□□□□□ -0.26
SND1-215ENST00000492772 MAP3K12Q12852 859 aa13.4□□□□□ -0.26
SND1-215ENST00000492772 OLFML2BQ68BL8 750 aa13.4□□□□□ -0.26
SND1-215ENST00000492772 MAGEB6Q8N7X4 407 aa13.4□□□□□ -0.26
SND1-215ENST00000492772 ARRDC4Q8NCT1 418 aa13.4□□□□□ -0.26
SND1-215ENST00000492772 ACER1Q8TDN7 264 aa13.4□□□□□ -0.26
SND1-215ENST00000492772 COL25A1Q9BXS0 654 aaPredicted RBP13.4□□□□□ -0.26
SND1-215ENST00000492772 MYH8P13535 1937 aa13.4□□□□□ -0.26
SND1-215ENST00000492772 STRNO43815 780 aa13.39□□□□□ -0.27
SND1-215ENST00000492772 BCAR3O75815 825 aa13.39□□□□□ -0.27
SND1-215ENST00000492772 IGHA2P01877 340 aa13.39□□□□□ -0.27
SND1-215ENST00000492772 SHMT1P34896 483 aa13.39□□□□□ -0.27
SND1-215ENST00000492772 ZKSCAN2Q63HK3 967 aa13.39□□□□□ -0.27
SND1-215ENST00000492772 DPP9Q86TI2 863 aa13.39□□□□□ -0.27
SND1-215ENST00000492772 TMEM57Q8N5G2 664 aa13.39□□□□□ -0.27
SND1-215ENST00000492772 SHCBP1Q8NEM2 672 aa13.39□□□□□ -0.27
SND1-215ENST00000492772 TRPV1Q8NER1 839 aa13.39□□□□□ -0.27
SND1-215ENST00000492772 NPLOC4Q8TAT6 608 aa13.39□□□□□ -0.27
SND1-215ENST00000492772 TLR7Q9NYK1 1049 aaKnown RBP13.39□□□□□ -0.27
SND1-215ENST00000492772 ATP11BQ9Y2G3 1177 aa13.39□□□□□ -0.27
SND1-215ENST00000492772 NOP58Q9Y2X3 529 aaKnown RBP13.39□□□□□ -0.27
SND1-215ENST00000492772 ADORA2AP29274 412 aa13.38□□□□□ -0.27
SND1-215ENST00000492772 CCDC8Q9H0W5 538 aaPredicted RBP13.38□□□□□ -0.27
SND1-215ENST00000492772 SLC5A4Q9NY91 659 aa13.38□□□□□ -0.27
SND1-215ENST00000492772 HOXC10Q9NYD6 342 aa13.38□□□□□ -0.27
SND1-215ENST00000492772 PARP14Q460N5 1801 aa13.37□□□□□ -0.27
SND1-215ENST00000492772 SEPT4O43236 478 aa13.37□□□□□ -0.27
SND1-215ENST00000492772 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
SND1-215ENST00000492772 COG2Q14746 738 aa13.37□□□□□ -0.27
SND1-215ENST00000492772 SNX17Q15036 470 aa13.37□□□□□ -0.27
SND1-215ENST00000492772 GJC2Q5T442 439 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms