RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 PAPPAQ13219 1627 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 ENPP3O14638 875 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 ENC1O14682 589 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 HOXD8P13378 290 aaPredicted RBP4.13□□□□□ -1.75
SNX13-209ENST00000492626 SSRP1Q08945 709 aaKnown RBP4.13□□□□□ -1.75
SNX13-209ENST00000492626 TCEA2Q15560 299 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 BNC2Q6ZN30 1099 aaPredicted RBP4.13□□□□□ -1.75
SNX13-209ENST00000492626 DNAJC5GQ8N7S2 189 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 LRRC3Q9BY71 257 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 MUC3BQ9H195 1237 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 BNIP3LO60238 219 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 CYP11A1P05108 521 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 GRNP28799 593 aaKnown RBP4.12□□□□□ -1.75
SNX13-209ENST00000492626 PTSQ03393 145 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 RASGRF1Q13972 1273 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 DDR2Q16832 855 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 HSP90AB2PQ58FF8 381 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 C16orf86Q6ZW13 317 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 NLGN1Q8N2Q7 840 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 MICAL1Q8TDZ2 1067 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 SH3TC2Q8TF17 1288 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 KCNQ5Q9NR82 932 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 KLF4O43474 513 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 RGS9O75916 674 aaPredicted RBP4.12□□□□□ -1.75
SNX13-209ENST00000492626 RPL6Q02878 288 aaKnown RBP4.12□□□□□ -1.75
SNX13-209ENST00000492626 GSTM4Q03013 218 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 FAM182BQ5T319 152 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 HDXQ7Z353 690 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 SLC7A3Q8WY07 619 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 CNTNAP3BQ96NU0 1288 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 DNAJC7Q99615 494 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 PCGF6Q9BYE7 350 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 CNTNAP3Q9BZ76 1288 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 IFT57Q9NWB7 429 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 PCDHA4Q9UN74 947 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 PEAK1Q9H792 1746 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 SCARA3Q6AZY7 606 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 GDF6Q6KF10 455 aaPredicted RBP4.12□□□□□ -1.75
SNX13-209ENST00000492626 SYNPOQ8N3V7 929 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 SLC30A3Q99726 388 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 SMG9Q9H0W8 520 aaKnown RBP4.12□□□□□ -1.75
SNX13-209ENST00000492626 C19orf44Q9H6X5 657 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 ATP10DQ9P241 1426 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 DUOX2Q9NRD8 1548 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 ADGRL3Q9HAR2 1447 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 ATP11AP98196 1134 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 NCAPHQ15003 741 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 PLEKHG4Q58EX7 1191 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 SYT9Q86SS6 491 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 SHDQ96IW2 340 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 RNPC3Q96LT9 517 aaKnown RBP4.12□□□□□ -1.75
SNX13-209ENST00000492626 USP21Q9UK80 565 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 ZNRF3Q9ULT6 936 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 PCDHB5Q9Y5E4 795 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 PCDHB14Q9Y5E9 798 aa4.12□□□□□ -1.75
SNX13-209ENST00000492626 S100BP04271 92 aaPredicted RBP4.11□□□□□ -1.75
SNX13-209ENST00000492626 CDC25BP30305 580 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 GIPRP48546 466 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 COL13A1Q5TAT6 717 aaPredicted RBP4.11□□□□□ -1.75
SNX13-209ENST00000492626 MAP1SQ66K74 1059 aaPredicted RBP4.11□□□□□ -1.75
SNX13-209ENST00000492626 TRIM46Q7Z4K8 759 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 ZSCAN1Q8NBB4 408 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 ZSWIM2Q8NEG5 633 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 FEZ1Q99689 392 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 PKD1L3Q7Z443 1732 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 MTUS2Q5JR59 1369 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 MARCH6O60337 910 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 PLCG1P19174 1290 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 CRKP46108 304 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 EEPD1Q7L9B9 569 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 CCDC155Q8N6L0 562 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 FBXO27Q8NI29 283 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 THAP3Q8WTV1 239 aaPredicted RBP4.11□□□□□ -1.75
SNX13-209ENST00000492626 HHIPQ96QV1 700 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 PFDN2Q9UHV9 154 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 KNDC1Q76NI1 1749 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 CPEP16870 476 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 MX2P20592 715 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 SV2AQ7L0J3 742 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 DCAF11Q8TEB1 546 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 POP1Q99575 1024 aaKnown RBP4.11□□□□□ -1.75
SNX13-209ENST00000492626 STRN4Q9NRL3 753 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 RAD18Q9NS91 495 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 LRP2BPQ9P2M1 347 aa4.11□□□□□ -1.75
SNX13-209ENST00000492626 NOS1P29475 1434 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 EEA1Q15075 1411 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 RAB11FIP3O75154 756 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 SIN3BO75182 1162 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 B3GALT4O96024 378 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 AVPP01185 164 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 GARTP22102 1010 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 ADH7P40394 386 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 RASA3Q14644 834 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.1□□□□□ -1.75
SNX13-209ENST00000492626 CDC6Q99741 560 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 TM9SF2Q99805 663 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 KDM2BQ8NHM5 1336 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 FAM221BA6H8Z2 402 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 H3BRJ5 948 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 CILPO75339 1184 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms