RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 GUCY1A2P33402 732 aa20.84■□□□□ 0.93
SGMS1-204ENST00000492601 SEPT2Q15019 361 aa20.84■□□□□ 0.93
SGMS1-204ENST00000492601 DEFB118Q96PH6 123 aa20.84■□□□□ 0.93
SGMS1-204ENST00000492601 TRIOBPQ9H2D6 2365 aa20.83■□□□□ 0.93
SGMS1-204ENST00000492601 SGPL1O95470 568 aa20.83■□□□□ 0.93
SGMS1-204ENST00000492601 USP14P54578 494 aa20.83■□□□□ 0.93
SGMS1-204ENST00000492601 ERVK-9P63128 1117 aa20.83■□□□□ 0.93
SGMS1-204ENST00000492601 ERVK-24P63145 666 aa20.83■□□□□ 0.93
SGMS1-204ENST00000492601 Q3C1V9 767 aa20.83■□□□□ 0.93
SGMS1-204ENST00000492601 POTEEQ6S8J3 1075 aa20.83■□□□□ 0.93
SGMS1-204ENST00000492601 SLC44A5Q8NCS7 719 aa20.83■□□□□ 0.93
SGMS1-204ENST00000492601 GCC1Q96CN9 775 aa20.83■□□□□ 0.93
SGMS1-204ENST00000492601 C12orf42Q96LP6 360 aa20.83■□□□□ 0.93
SGMS1-204ENST00000492601 ALPK3Q96L96 1907 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 USP17L15C9J2P7 530 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 USP17L13C9JLJ4 530 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 USP17L11C9JVI0 530 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 USP17L18D6R9N7 530 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 USP17L22D6RA61 530 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 USP17L17D6RBQ6 530 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 USP17L19D6RCP7 530 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 USP17L20D6RJB6 530 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 HMGCRP04035 888 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 VCAM1P19320 739 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 USP17L24Q0WX57 530 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 CCAR1Q8IX12 1150 aaKnown RBP20.82■□□□□ 0.92
SGMS1-204ENST00000492601 DPF3Q92784 378 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 DYNLL2Q96FJ2 89 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 KIAA1683Q9H0B3 1180 aa20.82■□□□□ 0.92
SGMS1-204ENST00000492601 RLFQ13129 1914 aa20.81■□□□□ 0.92
SGMS1-204ENST00000492601 CYP2D7A0A087X1C5 515 aa20.81■□□□□ 0.92
SGMS1-204ENST00000492601 FARP2O94887 1054 aaPredicted RBP20.81■□□□□ 0.92
SGMS1-204ENST00000492601 TFRCP02786 760 aaKnown RBP20.81■□□□□ 0.92
SGMS1-204ENST00000492601 CYP2B6P20813 491 aa20.81■□□□□ 0.92
SGMS1-204ENST00000492601 TRIM32Q13049 653 aa20.81■□□□□ 0.92
SGMS1-204ENST00000492601 UBE3CQ15386 1083 aa20.81■□□□□ 0.92
SGMS1-204ENST00000492601 GTF3C2Q8WUA4 911 aaPredicted RBP20.81■□□□□ 0.92
SGMS1-204ENST00000492601 PORCNQ9H237 461 aa20.81■□□□□ 0.92
SGMS1-204ENST00000492601 DCTPP1Q9H773 170 aa20.81■□□□□ 0.92
SGMS1-204ENST00000492601 PAK6Q9NQU5 681 aaPredicted RBP20.81■□□□□ 0.92
SGMS1-204ENST00000492601 ATP8A2Q9NTI2 1148 aa20.81■□□□□ 0.92
SGMS1-204ENST00000492601 H0YGN5 161 aa20.8■□□□□ 0.92
SGMS1-204ENST00000492601 SMIM22K7EJ46 135 aa20.8■□□□□ 0.92
SGMS1-204ENST00000492601 MAPK4P31152 587 aa20.8■□□□□ 0.92
SGMS1-204ENST00000492601 TSHZ3Q63HK5 1081 aa20.8■□□□□ 0.92
SGMS1-204ENST00000492601 CATSPERGQ6ZRH7 1159 aa20.8■□□□□ 0.92
SGMS1-204ENST00000492601 UBE2Q1Q7Z7E8 422 aa20.8■□□□□ 0.92
SGMS1-204ENST00000492601 NUDT12Q9BQG2 462 aa20.8■□□□□ 0.92
SGMS1-204ENST00000492601 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.8■□□□□ 0.92
SGMS1-204ENST00000492601 ECHDC1Q9NTX5 307 aa20.8■□□□□ 0.92
SGMS1-204ENST00000492601 PARP14Q460N5 1801 aa20.79■□□□□ 0.92
SGMS1-204ENST00000492601 HABP4Q5JVS0 413 aaKnown RBP20.79■□□□□ 0.92
SGMS1-204ENST00000492601 ZSCAN25Q6NSZ9 544 aa20.79■□□□□ 0.92
SGMS1-204ENST00000492601 TRIB2Q92519 343 aa20.79■□□□□ 0.92
SGMS1-204ENST00000492601 PUS7LQ9H0K6 701 aaKnown RBP20.79■□□□□ 0.92
SGMS1-204ENST00000492601 RPAP3Q9H6T3 665 aaPredicted RBP20.79■□□□□ 0.92
SGMS1-204ENST00000492601 CWC22Q9HCG8 908 aaKnown RBP20.79■□□□□ 0.92
SGMS1-204ENST00000492601 SWAP70Q9UH65 585 aa20.79■□□□□ 0.92
SGMS1-204ENST00000492601 SLC4A4Q9Y6R1 1079 aa20.79■□□□□ 0.92
SGMS1-204ENST00000492601 A0A1W2PRG0 241 aa20.78■□□□□ 0.92
SGMS1-204ENST00000492601 CNMDO75829 334 aa20.78■□□□□ 0.92
SGMS1-204ENST00000492601 GPR142Q7Z601 462 aa20.78■□□□□ 0.92
SGMS1-204ENST00000492601 CLEC10AQ8IUN9 316 aa20.78■□□□□ 0.92
SGMS1-204ENST00000492601 RABGAP1Q9Y3P9 1069 aa20.78■□□□□ 0.92
SGMS1-204ENST00000492601 COL11A1P12107 1806 aaPredicted RBP20.78■□□□□ 0.92
SGMS1-204ENST00000492601 ZNFX1Q9P2E3 1918 aaKnown RBP20.77■□□□□ 0.92
SGMS1-204ENST00000492601 USP17L12C9JPN9 530 aa20.77■□□□□ 0.92
SGMS1-204ENST00000492601 USP17L21D6R901 530 aa20.77■□□□□ 0.92
SGMS1-204ENST00000492601 AKR1B1P15121 316 aa20.77■□□□□ 0.92
SGMS1-204ENST00000492601 C12orf60Q5U649 245 aa20.77■□□□□ 0.92
SGMS1-204ENST00000492601 TMEM179Q6ZVK1 233 aa20.77■□□□□ 0.92
SGMS1-204ENST00000492601 PLEKHH3Q7Z736 793 aa20.77■□□□□ 0.92
SGMS1-204ENST00000492601 AMOTL1Q8IY63 956 aa20.77■□□□□ 0.92
SGMS1-204ENST00000492601 SOCS4Q8WXH5 440 aa20.77■□□□□ 0.92
SGMS1-204ENST00000492601 DDRGK1Q96HY6 314 aa20.77■□□□□ 0.92
SGMS1-204ENST00000492601 HTATIP2Q9BUP3 242 aa20.77■□□□□ 0.92
SGMS1-204ENST00000492601 RPTORQ8N122 1335 aa20.77■□□□□ 0.91
SGMS1-204ENST00000492601 CDK8P49336 464 aa20.76■□□□□ 0.91
SGMS1-204ENST00000492601 WDR78Q5VTH9 848 aa20.76■□□□□ 0.91
SGMS1-204ENST00000492601 GPATCH3Q96I76 525 aa20.76■□□□□ 0.91
SGMS1-204ENST00000492601 CRISPLD2Q9H0B8 497 aa20.76■□□□□ 0.91
SGMS1-204ENST00000492601 HMX1Q9NP08 348 aaPredicted RBP20.76■□□□□ 0.91
SGMS1-204ENST00000492601 BTBD7Q9P203 1132 aa20.76■□□□□ 0.91
SGMS1-204ENST00000492601 COLQQ9Y215 455 aaPredicted RBP20.76■□□□□ 0.91
SGMS1-204ENST00000492601 PCDHB15Q9Y5E8 787 aa20.76■□□□□ 0.91
SGMS1-204ENST00000492601 SPDYE16A6NNV3 312 aaPredicted RBP20.75■□□□□ 0.91
SGMS1-204ENST00000492601 PRKAR2AP13861 404 aaKnown RBP20.75■□□□□ 0.91
SGMS1-204ENST00000492601 RGS2P41220 211 aa20.75■□□□□ 0.91
SGMS1-204ENST00000492601 CCNA1P78396 465 aa20.75■□□□□ 0.91
SGMS1-204ENST00000492601 MORN1Q5T089 497 aa20.75■□□□□ 0.91
SGMS1-204ENST00000492601 USP6NLQ92738 828 aa20.75■□□□□ 0.91
SGMS1-204ENST00000492601 TANGO6Q9C0B7 1094 aa20.75■□□□□ 0.91
SGMS1-204ENST00000492601 FRMPD3Q5JV73 1810 aa20.75■□□□□ 0.91
SGMS1-204ENST00000492601 A0A0G2JMZ2 1700 aa20.75■□□□□ 0.91
SGMS1-204ENST00000492601 MYH4Q9Y623 1939 aa20.74■□□□□ 0.91
SGMS1-204ENST00000492601 XRCC5P13010 732 aaKnown RBP20.74■□□□□ 0.91
SGMS1-204ENST00000492601 ZKSCAN1P17029 563 aaPredicted RBP20.74■□□□□ 0.91
SGMS1-204ENST00000492601 CCL14Q16627 93 aa20.74■□□□□ 0.91
SGMS1-204ENST00000492601 KIAA1755Q5JYT7 1200 aa20.74■□□□□ 0.91
SGMS1-204ENST00000492601 CTR9Q6PD62 1173 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms