RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 HERVK_113P62684 666 aa17.68■□□□□ 0.42
SS18L1-205ENST00000492466 TRIM32Q13049 653 aa17.68■□□□□ 0.42
SS18L1-205ENST00000492466 Q3C1V9 767 aa17.68■□□□□ 0.42
SS18L1-205ENST00000492466 LNPKQ9C0E8 428 aa17.68■□□□□ 0.42
SS18L1-205ENST00000492466 EHD4Q9H223 541 aa17.68■□□□□ 0.42
SS18L1-205ENST00000492466 TMOD4Q9NZQ9 345 aa17.68■□□□□ 0.42
SS18L1-205ENST00000492466 TAOK2Q9UL54 1235 aa17.68■□□□□ 0.42
SS18L1-205ENST00000492466 MYH8P13535 1937 aa17.68■□□□□ 0.42
SS18L1-205ENST00000492466 ZNF532Q9HCE3 1301 aa17.68■□□□□ 0.42
SS18L1-205ENST00000492466 GLRX3O76003 335 aaKnown RBP17.67■□□□□ 0.42
SS18L1-205ENST00000492466 GH2P01242 217 aa17.67■□□□□ 0.42
SS18L1-205ENST00000492466 PLCD1P51178 756 aa17.67■□□□□ 0.42
SS18L1-205ENST00000492466 IRX3P78415 501 aaPredicted RBP17.67■□□□□ 0.42
SS18L1-205ENST00000492466 OTUD7AQ8TE49 926 aaPredicted RBP17.67■□□□□ 0.42
SS18L1-205ENST00000492466 HTATIP2Q9BUP3 242 aa17.67■□□□□ 0.42
SS18L1-205ENST00000492466 TFRCP02786 760 aaKnown RBP17.66■□□□□ 0.42
SS18L1-205ENST00000492466 HMGCRP04035 888 aa17.66■□□□□ 0.42
SS18L1-205ENST00000492466 NEFLP07196 543 aa17.66■□□□□ 0.42
SS18L1-205ENST00000492466 CAPN2P17655 700 aa17.66■□□□□ 0.42
SS18L1-205ENST00000492466 LRRFIP1Q32MZ4 808 aaKnown RBP17.66■□□□□ 0.42
SS18L1-205ENST00000492466 CHRDL2Q6WN34 429 aa17.66■□□□□ 0.42
SS18L1-205ENST00000492466 TRIB2Q92519 343 aa17.66■□□□□ 0.42
SS18L1-205ENST00000492466 C12orf42Q96LP6 360 aa17.66■□□□□ 0.42
SS18L1-205ENST00000492466 CRNKL1Q9BZJ0 848 aaKnown RBP17.66■□□□□ 0.42
SS18L1-205ENST00000492466 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.66■□□□□ 0.423e-6■■■■□ 25
SS18L1-205ENST00000492466 RBM27Q9P2N5 1060 aaKnown RBP17.66■□□□□ 0.42
SS18L1-205ENST00000492466 SERPINB13Q9UIV8 391 aa17.66■□□□□ 0.42
SS18L1-205ENST00000492466 DDX60LQ5H9U9 1706 aaKnown RBP17.66■□□□□ 0.42
SS18L1-205ENST00000492466 LAMA2P24043 3122 aaKnown RBP17.65■□□□□ 0.42
SS18L1-205ENST00000492466 COL6A3P12111 3177 aa17.65■□□□□ 0.42
SS18L1-205ENST00000492466 BAZ2AQ9UIF9 1905 aaKnown RBP17.65■□□□□ 0.42
SS18L1-205ENST00000492466 GUCY1A2P33402 732 aa17.65■□□□□ 0.42
SS18L1-205ENST00000492466 SHMT1P34896 483 aa17.65■□□□□ 0.42
SS18L1-205ENST00000492466 MNX1P50219 401 aaPredicted RBP17.65■□□□□ 0.42
SS18L1-205ENST00000492466 EVX2Q03828 476 aa17.65■□□□□ 0.42
SS18L1-205ENST00000492466 GABPAQ06546 454 aa17.65■□□□□ 0.42
SS18L1-205ENST00000492466 MAP3K21Q5TCX8 1036 aa17.65■□□□□ 0.42
SS18L1-205ENST00000492466 GPRC5AQ8NFJ5 357 aa17.65■□□□□ 0.42
SS18L1-205ENST00000492466 USP6NLQ92738 828 aa17.65■□□□□ 0.42
SS18L1-205ENST00000492466 FSD1Q9BTV5 496 aa17.65■□□□□ 0.42
SS18L1-205ENST00000492466 PORCNQ9H237 461 aa17.65■□□□□ 0.42
SS18L1-205ENST00000492466 TCRBV5S4A2TA0A5A2 114 aa17.64■□□□□ 0.41
SS18L1-205ENST00000492466 IGHDP01880 384 aa17.64■□□□□ 0.41
SS18L1-205ENST00000492466 ADD2P35612 726 aa17.64■□□□□ 0.41
SS18L1-205ENST00000492466 ERVK-9P63128 1117 aa17.64■□□□□ 0.41
SS18L1-205ENST00000492466 ERVK-24P63145 666 aa17.64■□□□□ 0.41
SS18L1-205ENST00000492466 USP17L2Q6R6M4 530 aa17.64■□□□□ 0.41
SS18L1-205ENST00000492466 SMC5Q8IY18 1101 aa17.64■□□□□ 0.41
SS18L1-205ENST00000492466 ACER1Q8TDN7 264 aa17.64■□□□□ 0.41
SS18L1-205ENST00000492466 DIS3LQ8TF46 1054 aaKnown RBP17.64■□□□□ 0.41
SS18L1-205ENST00000492466 PAWRQ96IZ0 340 aaKnown RBP17.64■□□□□ 0.41
SS18L1-205ENST00000492466 RPTORQ8N122 1335 aa17.64■□□□□ 0.41
SS18L1-205ENST00000492466 ALPK3Q96L96 1907 aa17.63■□□□□ 0.41
SS18L1-205ENST00000492466 CNMDO75829 334 aa17.63■□□□□ 0.41
SS18L1-205ENST00000492466 MBD4O95243 580 aa17.63■□□□□ 0.41
SS18L1-205ENST00000492466 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
SS18L1-205ENST00000492466 XRCC5P13010 732 aaKnown RBP17.63■□□□□ 0.41
SS18L1-205ENST00000492466 CYP2B6P20813 491 aa17.63■□□□□ 0.41
SS18L1-205ENST00000492466 TTC6Q86TZ1 520 aa17.63■□□□□ 0.41
SS18L1-205ENST00000492466 CHD1LQ86WJ1 897 aa17.63■□□□□ 0.41
SS18L1-205ENST00000492466 KBTBD3Q8NAB2 608 aa17.63■□□□□ 0.41
SS18L1-205ENST00000492466 DDRGK1Q96HY6 314 aa17.63■□□□□ 0.41
SS18L1-205ENST00000492466 CERKLQ49MI3 558 aaPredicted RBP17.62■□□□□ 0.41
SS18L1-205ENST00000492466 MORN1Q5T089 497 aa17.62■□□□□ 0.41
SS18L1-205ENST00000492466 NUDT12Q9BQG2 462 aa17.62■□□□□ 0.41
SS18L1-205ENST00000492466 KIAA1683Q9H0B3 1180 aa17.62■□□□□ 0.41
SS18L1-205ENST00000492466 ARMT1Q9H993 441 aa17.62■□□□□ 0.41
SS18L1-205ENST00000492466 HMX1Q9NP08 348 aaPredicted RBP17.62■□□□□ 0.41
SS18L1-205ENST00000492466 MAPK4P31152 587 aa17.61■□□□□ 0.41
SS18L1-205ENST00000492466 RAB3GAP1Q15042 981 aa17.61■□□□□ 0.41
SS18L1-205ENST00000492466 ZYXQ15942 572 aaKnown RBP17.61■□□□□ 0.41
SS18L1-205ENST00000492466 ABCB5Q2M3G0 1257 aa17.61■□□□□ 0.41
SS18L1-205ENST00000492466 CATSPERGQ6ZRH7 1159 aa17.61■□□□□ 0.41
SS18L1-205ENST00000492466 GPR142Q7Z601 462 aa17.61■□□□□ 0.41
SS18L1-205ENST00000492466 AMOTL1Q8IY63 956 aa17.61■□□□□ 0.41
SS18L1-205ENST00000492466 LCORLQ8N3X6 602 aa17.61■□□□□ 0.41
SS18L1-205ENST00000492466 ANKLE1Q8NAG6 615 aa17.61■□□□□ 0.41
SS18L1-205ENST00000492466 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
SS18L1-205ENST00000492466 OGDHLQ9ULD0 1010 aa17.61■□□□□ 0.41
SS18L1-205ENST00000492466 NR2E3Q9Y5X4 410 aa17.61■□□□□ 0.41
SS18L1-205ENST00000492466 TRIM6-TRIM34B2RNG4 842 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 USP17L15C9J2P7 530 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 USP17L13C9JLJ4 530 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 USP17L11C9JVI0 530 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 USP17L18D6R9N7 530 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 USP17L22D6RA61 530 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 USP17L17D6RBQ6 530 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 USP17L19D6RCP7 530 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 USP17L20D6RJB6 530 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 POLR3DP05423 398 aaPredicted RBP17.6■□□□□ 0.41
SS18L1-205ENST00000492466 ZFYP08048 801 aaPredicted RBP17.6■□□□□ 0.41
SS18L1-205ENST00000492466 VCAM1P19320 739 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 PDE1AP54750 535 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 NUCB1Q02818 461 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 USP17L24Q0WX57 530 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 UBE3CQ15386 1083 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 SLFNL1Q499Z3 407 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 NECAB2Q7Z6G3 386 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 GTF3C2Q8WUA4 911 aaPredicted RBP17.6■□□□□ 0.41
SS18L1-205ENST00000492466 SOCS4Q8WXH5 440 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms