RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 GGA3Q9NZ52 723 aa17.47■□□□□ 0.39
COPS7B-222ENST00000492423 HSP90AA1P07900 732 aaKnown RBP17.46■□□□□ 0.39
COPS7B-222ENST00000492423 C1QTNF8P60827 252 aa17.46■□□□□ 0.39
COPS7B-222ENST00000492423 RAB11FIP4Q86YS3 637 aa17.46■□□□□ 0.39
COPS7B-222ENST00000492423 HERC5Q9UII4 1024 aaKnown RBP17.46■□□□□ 0.39
COPS7B-222ENST00000492423 OTOFQ9HC10 1997 aa17.46■□□□□ 0.39
COPS7B-222ENST00000492423 PITPNM2Q9BZ72 1349 aa17.46■□□□□ 0.38
COPS7B-222ENST00000492423 CCDC69A6NI79 296 aa17.45■□□□□ 0.38
COPS7B-222ENST00000492423 TBC1D12O60347 775 aa17.45■□□□□ 0.38
COPS7B-222ENST00000492423 NOVP48745 357 aa17.45■□□□□ 0.38
COPS7B-222ENST00000492423 CCT2P78371 535 aaKnown RBP17.45■□□□□ 0.38
COPS7B-222ENST00000492423 MAP3K10Q02779 954 aa17.45■□□□□ 0.38
COPS7B-222ENST00000492423 RRP1BQ14684 758 aaKnown RBP17.45■□□□□ 0.38
COPS7B-222ENST00000492423 CCDC178Q5BJE1 867 aa17.45■□□□□ 0.38
COPS7B-222ENST00000492423 IFIT1BQ5T764 474 aaKnown RBP17.45■□□□□ 0.38
COPS7B-222ENST00000492423 NFXL1Q6ZNB6 911 aa17.45■□□□□ 0.38
COPS7B-222ENST00000492423 ZNF654Q8IZM8 581 aa17.45■□□□□ 0.38
COPS7B-222ENST00000492423 TMTC2Q8N394 836 aa17.45■□□□□ 0.38
COPS7B-222ENST00000492423 CCDC17Q96LX7 622 aa17.45■□□□□ 0.38
COPS7B-222ENST00000492423 MYL10Q9BUA6 226 aa17.45■□□□□ 0.38
COPS7B-222ENST00000492423 NCOA5Q9HCD5 579 aaKnown RBP17.45■□□□□ 0.38
COPS7B-222ENST00000492423 NAP1L2Q9ULW6 460 aaPredicted RBP17.45■□□□□ 0.38
COPS7B-222ENST00000492423 SSC5DA1L4H1 1573 aa17.45■□□□□ 0.38
COPS7B-222ENST00000492423 POTECB2RU33 542 aa17.44■□□□□ 0.38
COPS7B-222ENST00000492423 SHROOM1Q2M3G4 852 aaPredicted RBP17.44■□□□□ 0.38
COPS7B-222ENST00000492423 DGKHQ86XP1 1220 aa17.44■□□□□ 0.38
COPS7B-222ENST00000492423 TRIM34Q9BYJ4 488 aa17.44■□□□□ 0.38
COPS7B-222ENST00000492423 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.44■□□□□ 0.38
COPS7B-222ENST00000492423 GOLGB1Q14789 3259 aaKnown RBP17.43■□□□□ 0.38
COPS7B-222ENST00000492423 PHIPQ8WWQ0 1821 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 GOLGA8AA7E2F4 631 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 ZBTB43O43298 467 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 DTNBO60941 627 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 CTDNEP1O95476 244 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 RXRAP19793 462 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 EPHX2P34913 555 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 RCAN1P53805 252 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 JAG1P78504 1218 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 CERKLQ49MI3 558 aaPredicted RBP17.43■□□□□ 0.38
COPS7B-222ENST00000492423 MICU3Q86XE3 530 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 CLEC10AQ8IUN9 316 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 NSUN7Q8NE18 718 aaKnown RBP17.43■□□□□ 0.38
COPS7B-222ENST00000492423 CEP95Q96GE4 821 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 DEFB129Q9H1M3 183 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 FAM217BQ9NTX9 383 aaPredicted RBP17.43■□□□□ 0.38
COPS7B-222ENST00000492423 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.43■□□□□ 0.38
COPS7B-222ENST00000492423 SLC12A7Q9Y666 1083 aa17.43■□□□□ 0.38
COPS7B-222ENST00000492423 DDAH1O94760 285 aa17.42■□□□□ 0.38
COPS7B-222ENST00000492423 GDF11O95390 407 aa17.42■□□□□ 0.38
COPS7B-222ENST00000492423 CDC27P30260 824 aa17.42■□□□□ 0.38
COPS7B-222ENST00000492423 GUCY1A2P33402 732 aa17.42■□□□□ 0.38
COPS7B-222ENST00000492423 METAP2P50579 478 aaKnown RBP eCLIP17.42■□□□□ 0.38
COPS7B-222ENST00000492423 USP50Q70EL3 339 aaPredicted RBP17.42■□□□□ 0.38
COPS7B-222ENST00000492423 SMARCC2Q8TAQ2 1214 aa17.42■□□□□ 0.38
COPS7B-222ENST00000492423 PPP2R3BQ9Y5P8 575 aa17.42■□□□□ 0.38
COPS7B-222ENST00000492423 TROAPQ12815 778 aa17.41■□□□□ 0.38
COPS7B-222ENST00000492423 NBPF12Q5TAG4 269 aaPredicted RBP17.41■□□□□ 0.38
COPS7B-222ENST00000492423 MIGA2Q7L4E1 593 aa17.41■□□□□ 0.38
COPS7B-222ENST00000492423 TMEM47Q9BQJ4 181 aa17.41■□□□□ 0.38
COPS7B-222ENST00000492423 LLPHQ9BRT6 129 aaKnown RBP17.41■□□□□ 0.38
COPS7B-222ENST00000492423 TAF1DQ9H5J8 278 aaPredicted RBP17.41■□□□□ 0.38
COPS7B-222ENST00000492423 CWC22Q9HCG8 908 aaKnown RBP17.41■□□□□ 0.38
COPS7B-222ENST00000492423 MTMR4Q9NYA4 1195 aa17.41■□□□□ 0.38
COPS7B-222ENST00000492423 SMC3Q9UQE7 1217 aa17.41■□□□□ 0.38
COPS7B-222ENST00000492423 MPHOSPH10O00566 681 aaKnown RBP17.4■□□□□ 0.38
COPS7B-222ENST00000492423 JAK2O60674 1132 aa17.4■□□□□ 0.38
COPS7B-222ENST00000492423 GJB2P29033 226 aa17.4■□□□□ 0.38
COPS7B-222ENST00000492423 ABCB5Q2M3G0 1257 aa17.4■□□□□ 0.38
COPS7B-222ENST00000492423 SYNE3Q6ZMZ3 975 aa17.4■□□□□ 0.38
COPS7B-222ENST00000492423 TMEM179Q6ZVK1 233 aa17.4■□□□□ 0.38
COPS7B-222ENST00000492423 CCDC144CPQ8IYA2 1237 aa17.4■□□□□ 0.38
COPS7B-222ENST00000492423 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
COPS7B-222ENST00000492423 MYH15Q9Y2K3 1946 aa17.39■□□□□ 0.37
COPS7B-222ENST00000492423 PTPDC1A2A3K4 754 aa17.39■□□□□ 0.37
COPS7B-222ENST00000492423 IQCA1LA6NCM1 817 aa17.39■□□□□ 0.37
COPS7B-222ENST00000492423 TOP1P11387 765 aaKnown RBP17.39■□□□□ 0.37
COPS7B-222ENST00000492423 SEPT2Q15019 361 aa17.39■□□□□ 0.37
COPS7B-222ENST00000492423 NTRK3Q16288 839 aa17.39■□□□□ 0.37
COPS7B-222ENST00000492423 RTN1Q16799 776 aa17.39■□□□□ 0.37
COPS7B-222ENST00000492423 CATIPQ7Z7H3 387 aa17.39■□□□□ 0.37
COPS7B-222ENST00000492423 PNMA1Q8ND90 353 aa17.39■□□□□ 0.37
COPS7B-222ENST00000492423 NUP133Q8WUM0 1156 aa17.39■□□□□ 0.37
COPS7B-222ENST00000492423 KAT14Q9H8E8 782 aa17.39■□□□□ 0.37
COPS7B-222ENST00000492423 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
COPS7B-222ENST00000492423 PHF20L1A8MW92 1017 aa17.38■□□□□ 0.37
COPS7B-222ENST00000492423 ADM5C9JUS6 153 aa17.38■□□□□ 0.37
COPS7B-222ENST00000492423 GH2P01242 217 aa17.38■□□□□ 0.37
COPS7B-222ENST00000492423 CALM1P0DP23 149 aa17.38■□□□□ 0.37
COPS7B-222ENST00000492423 CALM2P0DP24 149 aa17.38■□□□□ 0.37
COPS7B-222ENST00000492423 CALM3P0DP25 149 aa17.38■□□□□ 0.37
COPS7B-222ENST00000492423 ADD1P35611 737 aaKnown RBP17.38■□□□□ 0.37
COPS7B-222ENST00000492423 PRAMEF18Q5VWM3 479 aa17.38■□□□□ 0.37
COPS7B-222ENST00000492423 FANCBQ8NB91 859 aa17.38■□□□□ 0.37
COPS7B-222ENST00000492423 DCPSQ96C86 337 aaKnown RBP17.38■□□□□ 0.37
COPS7B-222ENST00000492423 CHMP5Q9NZZ3 219 aa17.38■□□□□ 0.37
COPS7B-222ENST00000492423 NYAP2Q9P242 653 aa17.38■□□□□ 0.37
COPS7B-222ENST00000492423 ZBTB21Q9ULJ3 1066 aa17.38■□□□□ 0.37
COPS7B-222ENST00000492423 TTLL1O95922 423 aa17.37■□□□□ 0.37
COPS7B-222ENST00000492423 CAP2P40123 477 aa17.37■□□□□ 0.37
COPS7B-222ENST00000492423 GRM4Q14833 912 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms