RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 KANSL2Q9H9L4 492 aa27.47■■□□□ 1.99
SCN5A-213ENST00000491944 PTPRFP10586 1907 aa27.47■■□□□ 1.99
SCN5A-213ENST00000491944 PLIN4Q96Q06 1357 aa27.46■■□□□ 1.99
SCN5A-213ENST00000491944 ATP2B2Q01814 1243 aa27.46■■□□□ 1.99
SCN5A-213ENST00000491944 FEZ1Q99689 392 aa27.46■■□□□ 1.99
SCN5A-213ENST00000491944 USP26Q9BXU7 913 aa27.46■■□□□ 1.99
SCN5A-213ENST00000491944 KCNH4Q9UQ05 1017 aa27.46■■□□□ 1.99
SCN5A-213ENST00000491944 THSD7BQ9C0I4 1608 aa27.45■■□□□ 1.98
SCN5A-213ENST00000491944 MANSC4A6NHS7 340 aaPredicted RBP27.45■■□□□ 1.98
SCN5A-213ENST00000491944 CXCL11O14625 94 aa27.45■■□□□ 1.98
SCN5A-213ENST00000491944 EPB41L2O43491 1005 aaKnown RBP27.45■■□□□ 1.98
SCN5A-213ENST00000491944 KDM4AO75164 1064 aa27.45■■□□□ 1.98
SCN5A-213ENST00000491944 STOX1Q6ZVD7 989 aa27.45■■□□□ 1.98
SCN5A-213ENST00000491944 RALYLQ86SE5 291 aaKnown RBP27.45■■□□□ 1.98
SCN5A-213ENST00000491944 ZKSCAN1P17029 563 aaPredicted RBP27.44■■□□□ 1.98
SCN5A-213ENST00000491944 HSPA4P34932 840 aa27.44■■□□□ 1.98
SCN5A-213ENST00000491944 MAP2K2P36507 400 aa27.44■■□□□ 1.98
SCN5A-213ENST00000491944 MTMR2Q13614 643 aa27.44■■□□□ 1.98
SCN5A-213ENST00000491944 NKX2-3Q8TAU0 364 aa27.44■■□□□ 1.98
SCN5A-213ENST00000491944 ACER1Q8TDN7 264 aa27.44■■□□□ 1.98
SCN5A-213ENST00000491944 CEP95Q96GE4 821 aa27.44■■□□□ 1.98
SCN5A-213ENST00000491944 MS4A4AQ96JQ5 239 aa27.44■■□□□ 1.98
SCN5A-213ENST00000491944 ARHGEF10LQ9HCE6 1279 aa27.44■■□□□ 1.98
SCN5A-213ENST00000491944 MYH4Q9Y623 1939 aa27.43■■□□□ 1.98
SCN5A-213ENST00000491944 CCL15-CCL14A0A0B4J2E2 113 aa27.43■■□□□ 1.98
SCN5A-213ENST00000491944 IGKV6D-41A0A0C4DH26 115 aa27.43■■□□□ 1.98
SCN5A-213ENST00000491944 USP17L10C9JJH3 530 aa27.43■■□□□ 1.98
SCN5A-213ENST00000491944 SEC24BO95487 1268 aa27.43■■□□□ 1.98
SCN5A-213ENST00000491944 CETPP11597 493 aa27.43■■□□□ 1.98
SCN5A-213ENST00000491944 EEF2P13639 858 aaKnown RBP27.43■■□□□ 1.98
SCN5A-213ENST00000491944 MCCP23508 829 aa27.43■■□□□ 1.98
SCN5A-213ENST00000491944 CCL15Q16663 113 aa27.43■■□□□ 1.98
SCN5A-213ENST00000491944 NCOA7Q8NI08 942 aa27.43■■□□□ 1.98
SCN5A-213ENST00000491944 NMT2O60551 498 aa27.42■■□□□ 1.98
SCN5A-213ENST00000491944 NT5C2P49902 561 aa27.42■■□□□ 1.98
SCN5A-213ENST00000491944 BACE1P56817 501 aa27.42■■□□□ 1.98
SCN5A-213ENST00000491944 SREBF2Q12772 1141 aa27.42■■□□□ 1.98
SCN5A-213ENST00000491944 ZYXQ15942 572 aaKnown RBP27.42■■□□□ 1.98
SCN5A-213ENST00000491944 RASEFQ8IZ41 740 aa27.42■■□□□ 1.98
SCN5A-213ENST00000491944 MTMR4Q9NYA4 1195 aa27.42■■□□□ 1.98
SCN5A-213ENST00000491944 A0A0G2JLL6 359 aaPredicted RBP27.41■■□□□ 1.98
SCN5A-213ENST00000491944 HMGCS2P54868 508 aa27.41■■□□□ 1.98
SCN5A-213ENST00000491944 GADL1Q6ZQY3 521 aa27.41■■□□□ 1.98
SCN5A-213ENST00000491944 PRRT2Q7Z6L0 340 aaPredicted RBP27.41■■□□□ 1.98
SCN5A-213ENST00000491944 IL17RBQ9NRM6 502 aa27.41■■□□□ 1.98
SCN5A-213ENST00000491944 ZSWIM5Q9P217 1185 aa27.41■■□□□ 1.98
SCN5A-213ENST00000491944 A0A1W2PRG0 241 aa27.4■■□□□ 1.98
SCN5A-213ENST00000491944 SIAH1Q8IUQ4 282 aa27.4■■□□□ 1.98
SCN5A-213ENST00000491944 BRI3BPQ8WY22 251 aa27.4■■□□□ 1.98
SCN5A-213ENST00000491944 ZKSCAN3Q9BRR0 538 aa27.4■■□□□ 1.98
SCN5A-213ENST00000491944 SH2D4AQ9H788 454 aa27.4■■□□□ 1.98
SCN5A-213ENST00000491944 NYAP2Q9P242 653 aa27.4■■□□□ 1.98
SCN5A-213ENST00000491944 CLIP2Q9UDT6 1046 aa27.4■■□□□ 1.98
SCN5A-213ENST00000491944 C19orf81C9J6K1 198 aa27.39■■□□□ 1.98
SCN5A-213ENST00000491944 TTLL1O95922 423 aa27.39■■□□□ 1.98
SCN5A-213ENST00000491944 PPP4R3BQ5MIZ7 849 aa27.39■■□□□ 1.98
SCN5A-213ENST00000491944 IQCA1Q86XH1 822 aa27.39■■□□□ 1.98
SCN5A-213ENST00000491944 KIAA1683Q9H0B3 1180 aa27.39■■□□□ 1.98
SCN5A-213ENST00000491944 TMOD4Q9NZQ9 345 aa27.39■■□□□ 1.98
SCN5A-213ENST00000491944 STX8Q9UNK0 236 aa27.39■■□□□ 1.98
SCN5A-213ENST00000491944 LOC285556D6RIA3 1793 aa27.39■■□□□ 1.98
SCN5A-213ENST00000491944 INHBEP58166 350 aa27.38■■□□□ 1.97
SCN5A-213ENST00000491944 DGKZQ13574 1117 aa27.38■■□□□ 1.97
SCN5A-213ENST00000491944 KRT32Q14532 448 aa27.38■■□□□ 1.97
SCN5A-213ENST00000491944 TSGA10IPQ3SY00 556 aa27.38■■□□□ 1.97
SCN5A-213ENST00000491944 USP17L2Q6R6M4 530 aa27.38■■□□□ 1.97
SCN5A-213ENST00000491944 CYB5R4Q7L1T6 521 aa27.38■■□□□ 1.97
SCN5A-213ENST00000491944 FASTKD5Q7L8L6 764 aaKnown RBP27.38■■□□□ 1.97
SCN5A-213ENST00000491944 REM2Q8IYK8 340 aaPredicted RBP27.38■■□□□ 1.97
SCN5A-213ENST00000491944 KCNB2Q92953 911 aa27.38■■□□□ 1.97
SCN5A-213ENST00000491944 UBAC1Q9BSL1 405 aa27.38■■□□□ 1.97
SCN5A-213ENST00000491944 TCP11L1Q9NUJ3 509 aa27.38■■□□□ 1.97
SCN5A-213ENST00000491944 SNX14Q9Y5W7 946 aa27.38■■□□□ 1.97
SCN5A-213ENST00000491944 CEP350Q5VT06 3117 aa27.38■■□□□ 1.97
SCN5A-213ENST00000491944 TESPA1A2RU30 521 aaPredicted RBP27.37■■□□□ 1.97
SCN5A-213ENST00000491944 USP14P54578 494 aa27.37■■□□□ 1.97
SCN5A-213ENST00000491944 SH3D19Q5HYK7 790 aa27.37■■□□□ 1.97
SCN5A-213ENST00000491944 TMX2Q9Y320 296 aa27.37■■□□□ 1.97
SCN5A-213ENST00000491944 RAD21O60216 631 aa27.36■■□□□ 1.97
SCN5A-213ENST00000491944 TM4SF4P48230 202 aa27.36■■□□□ 1.97
SCN5A-213ENST00000491944 MB21D2Q8IYB1 491 aaPredicted RBP27.36■■□□□ 1.97
SCN5A-213ENST00000491944 ZSCAN10Q96SZ4 725 aaPredicted RBP27.36■■□□□ 1.97
SCN5A-213ENST00000491944 MOGSQ13724 837 aa27.35■■□□□ 1.97
SCN5A-213ENST00000491944 ADCK5Q3MIX3 580 aa27.35■■□□□ 1.97
SCN5A-213ENST00000491944 CCDC178Q5BJE1 867 aa27.35■■□□□ 1.97
SCN5A-213ENST00000491944 CHST3Q7LGC8 479 aa27.35■■□□□ 1.97
SCN5A-213ENST00000491944 IFNL1Q8IU54 200 aa27.35■■□□□ 1.97
SCN5A-213ENST00000491944 LRRC47Q8N1G4 583 aaKnown RBP27.35■■□□□ 1.97
SCN5A-213ENST00000491944 PROCA1Q8NCQ7 364 aaPredicted RBP27.35■■□□□ 1.97
SCN5A-213ENST00000491944 NEK1Q96PY6 1258 aa27.35■■□□□ 1.97
SCN5A-213ENST00000491944 PTPN18Q99952 460 aa27.35■■□□□ 1.97
SCN5A-213ENST00000491944 GOPCQ9HD26 462 aa27.35■■□□□ 1.97
SCN5A-213ENST00000491944 EMILIN3Q9NT22 766 aa27.35■■□□□ 1.97
SCN5A-213ENST00000491944 IGF2BP3O00425 579 aaKnown RBP eCLIP27.35■■□□□ 1.97
SCN5A-213ENST00000491944 OTUD7BQ6GQQ9 843 aa27.35■■□□□ 1.97
SCN5A-213ENST00000491944 JAKMIP1Q96N16 626 aaKnown RBP27.35■■□□□ 1.97
SCN5A-213ENST00000491944 TNKSO95271 1327 aa27.34■■□□□ 1.97
SCN5A-213ENST00000491944 BTBD19C9JJ37 291 aa27.34■■□□□ 1.97
SCN5A-213ENST00000491944 MCM5P33992 734 aa27.34■■□□□ 1.97
SCN5A-213ENST00000491944 VCPKMTQ9H867 229 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms