RNA–Protein interactions for RNA: ENST00000491936.5

TMEM50A-205, Transcript of transmembrane protein 50A, humanhuman

TSL 1 (best)

Gene TMEM50A, Length 965 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-205ENST00000491936 TFIP11Q9UBB9 837 aaKnown RBP17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 BAZ2AQ9UIF9 1905 aaKnown RBP17.51■□□□□ 0.39
TMEM50A-205ENST00000491936 SMIM22K7EJ46 135 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 C21orf2O43822 256 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 TSPY3P0CV98 308 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 TSPY8P0CW00 308 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 U2AF2P26368 475 aaKnown RBP eCLIP17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 CDK8P49336 464 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 CCDC144CPQ8IYA2 1237 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 FAM177A1Q8N128 213 aaPredicted RBP17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 PHKBQ93100 1093 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 LZTS2Q9BRK4 669 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 DBNDD1Q9H9R9 158 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 GRPEL1Q9HAV7 217 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 NMRK2Q9NPI5 230 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 POLR3EQ9NVU0 708 aa17.5■□□□□ 0.39
TMEM50A-205ENST00000491936 DICER1Q9UPY3 1922 aaKnown RBP17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 LMNB1P20700 586 aa17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 RASA1P20936 1047 aa17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 CRKP46108 304 aa17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 NOVP48745 357 aa17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 FXR2P51116 673 aaKnown RBP eCLIP17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 PLCD1P51178 756 aa17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 FAM47AQ5JRC9 791 aa17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 APOBEC3HQ6NTF7 200 aaKnown RBP17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 FAM173BQ6P4H8 233 aa17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 TMTC3Q6ZXV5 915 aa17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 KCNG4Q8TDN1 519 aa17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 DHX36Q9H2U1 1008 aaKnown RBP17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 NAV1Q8NEY1 1877 aa17.49■□□□□ 0.39
TMEM50A-205ENST00000491936 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 WDHD1O75717 1129 aaPredicted RBP17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 NASPP49321 788 aaPredicted RBP17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 GUCY1B3Q02153 619 aa17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 FUT2Q10981 343 aa17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 MYSM1Q5VVJ2 828 aa17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 RCSD1Q6JBY9 416 aa17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 CDC42EP5Q6NZY7 148 aa17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 DYNLL2Q96FJ2 89 aa17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 IDI2Q9BXS1 227 aa17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 EHD4Q9H223 541 aa17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 FOXP1Q9H334 677 aaPredicted RBP17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 IL17RBQ9NRM6 502 aa17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 SAP30BPQ9UHR5 308 aaKnown RBP17.48■□□□□ 0.39
TMEM50A-205ENST00000491936 DDX60LQ5H9U9 1706 aaKnown RBP17.47■□□□□ 0.39
TMEM50A-205ENST00000491936 HLA-DOAP06340 250 aa17.47■□□□□ 0.39
TMEM50A-205ENST00000491936 SMARCA1P28370 1054 aa17.47■□□□□ 0.39
TMEM50A-205ENST00000491936 MMP14P50281 582 aa17.47■□□□□ 0.39
TMEM50A-205ENST00000491936 GABPAQ06546 454 aa17.47■□□□□ 0.39
TMEM50A-205ENST00000491936 GNL2Q13823 731 aaKnown RBP17.47■□□□□ 0.39
TMEM50A-205ENST00000491936 AOC3Q16853 763 aa17.47■□□□□ 0.39
TMEM50A-205ENST00000491936 DDX19AQ9NUU7 478 aaKnown RBP17.47■□□□□ 0.39
TMEM50A-205ENST00000491936 PLIN4Q96Q06 1357 aa17.47■□□□□ 0.39
TMEM50A-205ENST00000491936 F8W031 263 aaPredicted RBP17.46■□□□□ 0.39
TMEM50A-205ENST00000491936 MMP1P03956 469 aa17.46■□□□□ 0.39
TMEM50A-205ENST00000491936 GRM4Q14833 912 aa17.46■□□□□ 0.39
TMEM50A-205ENST00000491936 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.39
TMEM50A-205ENST00000491936 GAS2L3Q86XJ1 694 aa17.46■□□□□ 0.39
TMEM50A-205ENST00000491936 SP7Q8TDD2 431 aaPredicted RBP17.46■□□□□ 0.39
TMEM50A-205ENST00000491936 USP28Q96RU2 1077 aa17.46■□□□□ 0.39
TMEM50A-205ENST00000491936 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.46■□□□□ 0.39
TMEM50A-205ENST00000491936 OSBPL5Q9H0X9 879 aaPredicted RBP17.46■□□□□ 0.39
TMEM50A-205ENST00000491936 ZC3H4Q9UPT8 1303 aaKnown RBP17.46■□□□□ 0.38
TMEM50A-205ENST00000491936 FOCADQ5VW36 1801 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 A0A1W2PQ27 194 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 A0A1W2PQ64 194 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 A0A1W2PQD8 194 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 TOP1P11387 765 aaKnown RBP17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 FOSBP53539 338 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 EVX2Q03828 476 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 JMYQ8N9B5 988 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 LINC00301Q8NCQ3 95 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 PNMA1Q8ND90 353 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 CCDC17Q96LX7 622 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 SERPINB13Q9UIV8 391 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 MORC2Q9Y6X9 1032 aaPredicted RBP17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 TCHHQ07283 1943 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 LTBP3Q9NS15 1303 aa17.45■□□□□ 0.38
TMEM50A-205ENST00000491936 SYCE3A1L190 88 aa17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 NMT2O60551 498 aa17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 PPFIA3O75145 1194 aa17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 XRCC6P12956 609 aaKnown RBP eCLIP17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 SCNN1DP51172 638 aa17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 RILPL1Q5EBL4 403 aa17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 ANO1Q5XXA6 986 aa17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 ADALQ6DHV7 355 aa17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 FOXP4Q8IVH2 680 aaPredicted RBP17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 NOSTRINQ8IVI9 506 aa17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 PGBD1Q96JS3 809 aa17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 SH3GLB2Q9NR46 395 aa17.44■□□□□ 0.38
TMEM50A-205ENST00000491936 CTAGE5O15320 804 aa17.43■□□□□ 0.38
TMEM50A-205ENST00000491936 PPP6R2O75170 966 aa17.43■□□□□ 0.38
TMEM50A-205ENST00000491936 ENTPD3O75355 529 aa17.43■□□□□ 0.38
TMEM50A-205ENST00000491936 VIL1P09327 827 aaKnown RBP17.43■□□□□ 0.38
TMEM50A-205ENST00000491936 SLC39A14Q15043 492 aa17.43■□□□□ 0.38
TMEM50A-205ENST00000491936 STK38Q15208 465 aa17.43■□□□□ 0.38
TMEM50A-205ENST00000491936 SF3A1Q15459 793 aaKnown RBP17.43■□□□□ 0.38
TMEM50A-205ENST00000491936 PKN1Q16512 942 aa17.43■□□□□ 0.38
TMEM50A-205ENST00000491936 KIAA0825Q8IV33 1275 aa17.43■□□□□ 0.38
TMEM50A-205ENST00000491936 BICD2Q8TD16 824 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms