RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 CLEC10AQ8IUN9 316 aa18.12■□□□□ 0.49
SS18L1-204ENST00000491916 PROCA1Q8NCQ7 364 aaPredicted RBP18.12■□□□□ 0.49
SS18L1-204ENST00000491916 ZNF296Q8WUU4 475 aaPredicted RBP18.12■□□□□ 0.49
SS18L1-204ENST00000491916 CCDC17Q96LX7 622 aa18.12■□□□□ 0.49
SS18L1-204ENST00000491916 NBPF3Q9H094 633 aa18.12■□□□□ 0.49
SS18L1-204ENST00000491916 AS3MTQ9HBK9 375 aa18.12■□□□□ 0.49
SS18L1-204ENST00000491916 AGTPBP1Q9UPW5 1226 aa18.12■□□□□ 0.49
SS18L1-204ENST00000491916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.12■□□□□ 0.49
SS18L1-204ENST00000491916 ZMYM6O95789 1325 aa18.12■□□□□ 0.49
SS18L1-204ENST00000491916 USP17L10C9JJH3 530 aa18.11■□□□□ 0.49
SS18L1-204ENST00000491916 FGRP09769 529 aa18.11■□□□□ 0.49
SS18L1-204ENST00000491916 CTDSPL2Q05D32 466 aa18.11■□□□□ 0.49
SS18L1-204ENST00000491916 TAF1CQ15572 869 aaPredicted RBP18.11■□□□□ 0.49
SS18L1-204ENST00000491916 GADL1Q6ZQY3 521 aa18.11■□□□□ 0.49
SS18L1-204ENST00000491916 CABP5Q9NP86 173 aa18.11■□□□□ 0.49
SS18L1-204ENST00000491916 SLC45A1Q9Y2W3 748 aa18.11■□□□□ 0.49
SS18L1-204ENST00000491916 IGKV6D-41A0A0C4DH26 115 aa18.1■□□□□ 0.49
SS18L1-204ENST00000491916 C19orf81C9J6K1 198 aa18.1■□□□□ 0.49
SS18L1-204ENST00000491916 TLR2O60603 784 aa18.1■□□□□ 0.49
SS18L1-204ENST00000491916 PRDM1O75626 825 aa18.1■□□□□ 0.49
SS18L1-204ENST00000491916 BMP2KLQ5H9B9 411 aa18.1■□□□□ 0.49
SS18L1-204ENST00000491916 KIAA1755Q5JYT7 1200 aa18.1■□□□□ 0.49
SS18L1-204ENST00000491916 C17orf99Q6UX52 265 aa18.1■□□□□ 0.49
SS18L1-204ENST00000491916 NKX2-3Q8TAU0 364 aa18.1■□□□□ 0.49
SS18L1-204ENST00000491916 C12orf42Q96LP6 360 aa18.1■□□□□ 0.49
SS18L1-204ENST00000491916 KIAA1683Q9H0B3 1180 aa18.1■□□□□ 0.49
SS18L1-204ENST00000491916 CENPFP49454 3210 aa18.09■□□□□ 0.49
SS18L1-204ENST00000491916 MPHOSPH10O00566 681 aaKnown RBP18.09■□□□□ 0.49
SS18L1-204ENST00000491916 CYP2C8P10632 490 aa18.09■□□□□ 0.49
SS18L1-204ENST00000491916 POTEEQ6S8J3 1075 aa18.09■□□□□ 0.49
SS18L1-204ENST00000491916 DSCC1Q9BVC3 393 aa18.09■□□□□ 0.49
SS18L1-204ENST00000491916 ZFYVE28Q9HCC9 887 aa18.09■□□□□ 0.49
SS18L1-204ENST00000491916 RAD50Q92878 1312 aa18.08■□□□□ 0.49
SS18L1-204ENST00000491916 SGSM2O43147 1006 aa18.08■□□□□ 0.48
SS18L1-204ENST00000491916 HOXA7P31268 230 aaPredicted RBP18.08■□□□□ 0.48
SS18L1-204ENST00000491916 MFAP1P55081 439 aaKnown RBP18.08■□□□□ 0.48
SS18L1-204ENST00000491916 USP17L2Q6R6M4 530 aa18.08■□□□□ 0.48
SS18L1-204ENST00000491916 MKNK2Q9HBH9 465 aa18.08■□□□□ 0.48
SS18L1-204ENST00000491916 PLIN4Q96Q06 1357 aa18.07■□□□□ 0.48
SS18L1-204ENST00000491916 FKTNO75072 461 aa18.07■□□□□ 0.48
SS18L1-204ENST00000491916 PTH1RQ03431 593 aa18.07■□□□□ 0.48
SS18L1-204ENST00000491916 TMX2Q9Y320 296 aa18.07■□□□□ 0.48
SS18L1-204ENST00000491916 BCRP11274 1271 aa18.06■□□□□ 0.48
SS18L1-204ENST00000491916 EEF2P13639 858 aaKnown RBP18.06■□□□□ 0.48
SS18L1-204ENST00000491916 HAND2P61296 217 aa18.06■□□□□ 0.48
SS18L1-204ENST00000491916 ICA1Q05084 483 aa18.06■□□□□ 0.48
SS18L1-204ENST00000491916 ZYXQ15942 572 aaKnown RBP18.06■□□□□ 0.48
SS18L1-204ENST00000491916 FAM47AQ5JRC9 791 aa18.06■□□□□ 0.48
SS18L1-204ENST00000491916 TBC1D10CQ8IV04 446 aa18.06■□□□□ 0.48
SS18L1-204ENST00000491916 NEDD1Q8NHV4 660 aa18.06■□□□□ 0.48
SS18L1-204ENST00000491916 ASCC2Q9H1I8 757 aaPredicted RBP18.06■□□□□ 0.48
SS18L1-204ENST00000491916 KANSL2Q9H9L4 492 aa18.06■□□□□ 0.48
SS18L1-204ENST00000491916 CPA4Q9UI42 421 aa18.06■□□□□ 0.48
SS18L1-204ENST00000491916 LAMA4Q16363 1823 aa18.06■□□□□ 0.48
SS18L1-204ENST00000491916 ZSWIM8A7E2V4 1837 aa18.05■□□□□ 0.48
SS18L1-204ENST00000491916 ORC4O43929 436 aa18.05■□□□□ 0.48
SS18L1-204ENST00000491916 CTGFP29279 349 aa18.05■□□□□ 0.48
SS18L1-204ENST00000491916 PDE4BQ07343 736 aa18.05■□□□□ 0.48
SS18L1-204ENST00000491916 ZNF444Q8N0Y2 327 aaPredicted RBP18.05■□□□□ 0.48
SS18L1-204ENST00000491916 PARK7Q99497 189 aaKnown RBP18.05■□□□□ 0.48
SS18L1-204ENST00000491916 TMOD4Q9NZQ9 345 aa18.05■□□□□ 0.48
SS18L1-204ENST00000491916 RLFQ13129 1914 aa18.05■□□□□ 0.48
SS18L1-204ENST00000491916 VCAM1P19320 739 aa18.04■□□□□ 0.48
SS18L1-204ENST00000491916 NOVP48745 357 aa18.04■□□□□ 0.48
SS18L1-204ENST00000491916 USP14P54578 494 aa18.04■□□□□ 0.48
SS18L1-204ENST00000491916 TFAP4Q01664 338 aa18.04■□□□□ 0.48
SS18L1-204ENST00000491916 SP3Q02447 781 aa18.04■□□□□ 0.48
SS18L1-204ENST00000491916 STAG1Q8WVM7 1258 aa18.04■□□□□ 0.48
SS18L1-204ENST00000491916 CEP95Q96GE4 821 aa18.04■□□□□ 0.48
SS18L1-204ENST00000491916 P2RX7Q99572 595 aaKnown RBP18.04■□□□□ 0.48
SS18L1-204ENST00000491916 ZNF287Q9HBT7 754 aa18.04■□□□□ 0.48
SS18L1-204ENST00000491916 IL17RBQ9NRM6 502 aa18.04■□□□□ 0.48
SS18L1-204ENST00000491916 MTMR4Q9NYA4 1195 aa18.04■□□□□ 0.48
SS18L1-204ENST00000491916 NYAP2Q9P242 653 aa18.04■□□□□ 0.48
SS18L1-204ENST00000491916 SLC3A2P08195 630 aaKnown RBP18.03■□□□□ 0.48
SS18L1-204ENST00000491916 CATSPERGQ6ZRH7 1159 aa18.03■□□□□ 0.48
SS18L1-204ENST00000491916 CD99L2Q8TCZ2 262 aa18.03■□□□□ 0.48
SS18L1-204ENST00000491916 RUFY2Q8WXA3 655 aa18.03■□□□□ 0.48
SS18L1-204ENST00000491916 MKL1Q969V6 931 aa18.03■□□□□ 0.48
SS18L1-204ENST00000491916 FEZ1Q99689 392 aa18.03■□□□□ 0.48
SS18L1-204ENST00000491916 ESYT1Q9BSJ8 1104 aa18.03■□□□□ 0.48
SS18L1-204ENST00000491916 ARHGAP39Q9C0H5 1083 aa18.03■□□□□ 0.48
SS18L1-204ENST00000491916 NMT2O60551 498 aa18.02■□□□□ 0.48
SS18L1-204ENST00000491916 AKNAD1Q5T1N1 836 aa18.02■□□□□ 0.48
SS18L1-204ENST00000491916 MAP4K1Q92918 833 aa18.02■□□□□ 0.48
SS18L1-204ENST00000491916 VCPKMTQ9H867 229 aa18.02■□□□□ 0.48
SS18L1-204ENST00000491916 ARHGEF10LQ9HCE6 1279 aa18.02■□□□□ 0.48
SS18L1-204ENST00000491916 MYH4Q9Y623 1939 aa18.02■□□□□ 0.47
SS18L1-204ENST00000491916 NEDD4P46934 1319 aa18.01■□□□□ 0.47
SS18L1-204ENST00000491916 ZNF213O14771 459 aa18.01■□□□□ 0.47
SS18L1-204ENST00000491916 PEX10O60683 326 aa18.01■□□□□ 0.47
SS18L1-204ENST00000491916 LACTBP83111 547 aaPredicted RBP18.01■□□□□ 0.47
SS18L1-204ENST00000491916 PABPC4Q13310 644 aaKnown RBP eCLIP18.01■□□□□ 0.47
SS18L1-204ENST00000491916 CTU1Q7Z7A3 348 aaKnown RBP18.01■□□□□ 0.47
SS18L1-204ENST00000491916 LSG1Q9H089 658 aaKnown RBP18.01■□□□□ 0.47
SS18L1-204ENST00000491916 RPAP3Q9H6T3 665 aaPredicted RBP18.01■□□□□ 0.47
SS18L1-204ENST00000491916 TXNRD2Q9NNW7 524 aa18.01■□□□□ 0.47
SS18L1-204ENST00000491916 PNMA3Q9UL41 463 aa18.01■□□□□ 0.47
SS18L1-204ENST00000491916 TAF6LQ9Y6J9 622 aa18.01■□□□□ 0.47
SS18L1-204ENST00000491916 USP17L15C9J2P7 530 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms