RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 GRB14Q14449 540 aa17.11■□□□□ 0.33
ATG4B-222ENST00000491867 ADAMTS19Q8TE59 1207 aa17.11■□□□□ 0.33
ATG4B-222ENST00000491867 ATXN2LQ8WWM7 1075 aaKnown RBP17.11■□□□□ 0.33
ATG4B-222ENST00000491867 DHX36Q9H2U1 1008 aaKnown RBP17.11■□□□□ 0.33
ATG4B-222ENST00000491867 ZNF576Q9H609 170 aa17.11■□□□□ 0.33
ATG4B-222ENST00000491867 RAI14Q9P0K7 980 aa17.11■□□□□ 0.33
ATG4B-222ENST00000491867 CHD7Q9P2D1 2997 aa17.11■□□□□ 0.33
ATG4B-222ENST00000491867 IGHA2P01877 340 aa17.1■□□□□ 0.33
ATG4B-222ENST00000491867 PI16Q6UXB8 463 aa17.1■□□□□ 0.33
ATG4B-222ENST00000491867 CRACR2BQ8N4Y2 399 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-222ENST00000491867 XAGE2Q96GT9 111 aa17.1■□□□□ 0.33
ATG4B-222ENST00000491867 ASB2Q96Q27 587 aa17.1■□□□□ 0.33
ATG4B-222ENST00000491867 TRIM34Q9BYJ4 488 aa17.1■□□□□ 0.33
ATG4B-222ENST00000491867 GINM1Q9NU53 330 aa17.1■□□□□ 0.33
ATG4B-222ENST00000491867 HMG20BQ9P0W2 317 aa17.1■□□□□ 0.33
ATG4B-222ENST00000491867 MUC6Q6W4X9 2439 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 USP17L15C9J2P7 530 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 USP17L13C9JLJ4 530 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 USP17L11C9JVI0 530 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 USP17L18D6R9N7 530 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 USP17L22D6RA61 530 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 USP17L17D6RBQ6 530 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 USP17L19D6RCP7 530 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 USP17L20D6RJB6 530 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 USP17L24Q0WX57 530 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
ATG4B-222ENST00000491867 ZYXQ15942 572 aaKnown RBP17.09■□□□□ 0.33
ATG4B-222ENST00000491867 METTL16Q86W50 562 aaKnown RBP17.09■□□□□ 0.33
ATG4B-222ENST00000491867 FOXP4Q8IVH2 680 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-222ENST00000491867 BTBD7Q9P203 1132 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 TACC3Q9Y6A5 838 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 SIPA1L1O43166 1804 aa17.09■□□□□ 0.33
ATG4B-222ENST00000491867 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-222ENST00000491867 A0A1B0GUL7 405 aa17.08■□□□□ 0.32
ATG4B-222ENST00000491867 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-222ENST00000491867 UBTFL1P0CB47 393 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-222ENST00000491867 HOXD11P31277 338 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-222ENST00000491867 LRRC41Q15345 812 aa17.08■□□□□ 0.32
ATG4B-222ENST00000491867 C1orf53Q5VUE5 145 aa17.08■□□□□ 0.32
ATG4B-222ENST00000491867 MAPKAPK5Q8IW41 473 aa17.08■□□□□ 0.32
ATG4B-222ENST00000491867 SPATA5Q8NB90 893 aa17.08■□□□□ 0.32
ATG4B-222ENST00000491867 TIFAQ96CG3 184 aa17.08■□□□□ 0.32
ATG4B-222ENST00000491867 UHRF1Q96T88 793 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-222ENST00000491867 FEZ1Q99689 392 aa17.08■□□□□ 0.32
ATG4B-222ENST00000491867 THEGQ9P2T0 379 aa17.08■□□□□ 0.32
ATG4B-222ENST00000491867 SEPT4O43236 478 aa17.07■□□□□ 0.32
ATG4B-222ENST00000491867 CLTBP09497 229 aa17.07■□□□□ 0.32
ATG4B-222ENST00000491867 OLFML2BQ68BL8 750 aa17.07■□□□□ 0.32
ATG4B-222ENST00000491867 CATSPERGQ6ZRH7 1159 aa17.07■□□□□ 0.32
ATG4B-222ENST00000491867 DPP9Q86TI2 863 aa17.07■□□□□ 0.32
ATG4B-222ENST00000491867 TGFBRAP1Q8WUH2 860 aa17.07■□□□□ 0.32
ATG4B-222ENST00000491867 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
ATG4B-222ENST00000491867 COPRSQ9NQ92 184 aa17.07■□□□□ 0.32
ATG4B-222ENST00000491867 PALD1Q9ULE6 856 aa17.07■□□□□ 0.32
ATG4B-222ENST00000491867 GH2P01242 217 aa17.06■□□□□ 0.32
ATG4B-222ENST00000491867 RAG1P15918 1043 aa17.06■□□□□ 0.32
ATG4B-222ENST00000491867 ADORA2AP29274 412 aa17.06■□□□□ 0.32
ATG4B-222ENST00000491867 MRPS5P82675 430 aaKnown RBP17.06■□□□□ 0.32
ATG4B-222ENST00000491867 FPGSQ05932 587 aa17.06■□□□□ 0.32
ATG4B-222ENST00000491867 PRAMEF19Q5SWL8 479 aa17.06■□□□□ 0.32
ATG4B-222ENST00000491867 C12orf42Q96LP6 360 aa17.06■□□□□ 0.32
ATG4B-222ENST00000491867 GAS2L1Q99501 681 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-222ENST00000491867 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATG4B-222ENST00000491867 LRP2BPQ9P2M1 347 aa17.06■□□□□ 0.32
ATG4B-222ENST00000491867 REV3LO60673 3130 aa17.05■□□□□ 0.32
ATG4B-222ENST00000491867 FLT1P17948 1338 aa17.05■□□□□ 0.32
ATG4B-222ENST00000491867 KIAA0355O15063 1070 aa17.05■□□□□ 0.32
ATG4B-222ENST00000491867 TFCP2Q12800 502 aa17.05■□□□□ 0.32
ATG4B-222ENST00000491867 FAM47AQ5JRC9 791 aa17.05■□□□□ 0.32
ATG4B-222ENST00000491867 AKNAD1Q5T1N1 836 aa17.05■□□□□ 0.32
ATG4B-222ENST00000491867 LBX2Q6XYB7 198 aa17.05■□□□□ 0.32
ATG4B-222ENST00000491867 NEUROD6Q96NK8 337 aa17.05■□□□□ 0.32
ATG4B-222ENST00000491867 PRDM12Q9H4Q4 367 aa17.05■□□□□ 0.32
ATG4B-222ENST00000491867 SAP30BPQ9UHR5 308 aaKnown RBP17.05■□□□□ 0.32
ATG4B-222ENST00000491867 AKAP2Q9Y2D5 859 aa17.05■□□□□ 0.32
ATG4B-222ENST00000491867 XIRP2A4UGR9 3374 aa17.05■□□□□ 0.32
ATG4B-222ENST00000491867 ZNF316A6NFI3 1004 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-222ENST00000491867 PQBP1O60828 265 aaKnown RBP17.04■□□□□ 0.32
ATG4B-222ENST00000491867 BAG3O95817 575 aa17.04■□□□□ 0.32
ATG4B-222ENST00000491867 PLCG2P16885 1265 aa17.04■□□□□ 0.32
ATG4B-222ENST00000491867 VCAM1P19320 739 aa17.04■□□□□ 0.32
ATG4B-222ENST00000491867 CCDC85BQ15834 202 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-222ENST00000491867 GORABQ5T7V8 394 aa17.04■□□□□ 0.32
ATG4B-222ENST00000491867 FAM9BQ8IZU0 186 aa17.04■□□□□ 0.32
ATG4B-222ENST00000491867 IL27Q8NEV9 243 aa17.04■□□□□ 0.32
ATG4B-222ENST00000491867 SSH1Q8WYL5 1049 aa17.04■□□□□ 0.32
ATG4B-222ENST00000491867 PHF24Q9UPV7 400 aa17.04■□□□□ 0.32
ATG4B-222ENST00000491867 SMCHD1A6NHR9 2005 aa17.04■□□□□ 0.32
ATG4B-222ENST00000491867 SPDYE16A6NNV3 312 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-222ENST00000491867 KIAA1683Q9H0B3 1180 aa17.03■□□□□ 0.32
ATG4B-222ENST00000491867 TMEM39AQ9NV64 488 aa17.03■□□□□ 0.32
ATG4B-222ENST00000491867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-222ENST00000491867 ZNF521Q96K83 1311 aa17.02■□□□□ 0.32
ATG4B-222ENST00000491867 STRNO43815 780 aa17.02■□□□□ 0.32
ATG4B-222ENST00000491867 COBLO75128 1261 aa17.02■□□□□ 0.32
ATG4B-222ENST00000491867 USP14P54578 494 aa17.02■□□□□ 0.32
ATG4B-222ENST00000491867 PPP4CP60510 307 aa17.02■□□□□ 0.32
ATG4B-222ENST00000491867 NAA16Q6N069 864 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-222ENST00000491867 ACER1Q8TDN7 264 aa17.02■□□□□ 0.32
ATG4B-222ENST00000491867 NECAB3Q96P71 396 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms