RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 KARSQ15046 597 aaKnown RBP12.19□□□□□ -0.46
SNED1-211ENST00000491761 PTPAQ15257 358 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 C10orf67Q8IYJ2 551 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 SEPT11Q9NVA2 429 aaKnown RBP12.19□□□□□ -0.46
SNED1-211ENST00000491761 PNPLA7Q6ZV29 1317 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 NLRP5P59047 1200 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 RNF187Q5TA31 235 aaPredicted RBP12.18□□□□□ -0.46
SNED1-211ENST00000491761 CRNKL1Q9BZJ0 848 aaKnown RBP12.18□□□□□ -0.46
SNED1-211ENST00000491761 V9GY48 417 aaPredicted RBP12.18□□□□□ -0.46
SNED1-211ENST00000491761 GYG1P46976 350 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 NTRK3Q16288 839 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 RPGRQ92834 1020 aaKnown RBP12.18□□□□□ -0.46
SNED1-211ENST00000491761 DRC1Q96MC2 740 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 CCDC113Q9H0I3 377 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 BCCIPQ9P287 314 aaKnown RBP eCLIP12.18□□□□□ -0.46
SNED1-211ENST00000491761 HPSEQ9Y251 543 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 PTPREP23469 700 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 NR5A1Q13285 461 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 ARMCX5Q6P1M9 558 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 RNF26Q9BY78 433 aaPredicted RBP12.18□□□□□ -0.46
SNED1-211ENST00000491761 VPS54Q9P1Q0 977 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 DNAJC21Q5F1R6 531 aaKnown RBP12.18□□□□□ -0.46
SNED1-211ENST00000491761 TRIML1Q8N9V2 468 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 SLC4A9Q96Q91 983 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 ZSCAN10Q96SZ4 725 aaPredicted RBP12.18□□□□□ -0.46
SNED1-211ENST00000491761 RABEP2Q9H5N1 569 aa12.18□□□□□ -0.46
SNED1-211ENST00000491761 PRDM1O75626 825 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 NEFHP12036 1026 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 POLD1P28340 1107 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 RCAN1P53805 252 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 NYAP1Q6ZVC0 841 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 MAP3K14Q99558 947 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 BAG1Q99933 345 aaPredicted RBP12.17□□□□□ -0.46
SNED1-211ENST00000491761 ARHGAP6O43182 974 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 GUCY1A2P33402 732 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 USP5P45974 858 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 ELF2Q15723 593 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 FKBP15Q5T1M5 1219 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 METTL16Q86W50 562 aaKnown RBP12.17□□□□□ -0.46
SNED1-211ENST00000491761 PUF60Q9UHX1 559 aaKnown RBP12.17□□□□□ -0.46
SNED1-211ENST00000491761 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 BCL9O00512 1426 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 ATRNO75882 1429 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 PDE4BQ07343 736 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 NBPF11Q86T75 865 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 VSTM4Q8IW00 320 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 LZTFL1Q9NQ48 299 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 MAN1B1Q9UKM7 699 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 PCDHB6Q9Y5E3 794 aa12.17□□□□□ -0.46
SNED1-211ENST00000491761 ECM2O94769 699 aaPredicted RBP12.16□□□□□ -0.46
SNED1-211ENST00000491761 ETF1P62495 437 aaKnown RBP12.16□□□□□ -0.46
SNED1-211ENST00000491761 UBE4AQ14139 1066 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
SNED1-211ENST00000491761 SRPRBQ9Y5M8 271 aaKnown RBP12.16□□□□□ -0.46
SNED1-211ENST00000491761 TSPY2A6NKD2 308 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 KIF5BP33176 963 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 STX17P56962 302 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 TRMT1LQ7Z2T5 733 aaKnown RBP12.16□□□□□ -0.46
SNED1-211ENST00000491761 TRMT44Q8IYL2 757 aaKnown RBP12.16□□□□□ -0.46
SNED1-211ENST00000491761 PYM1Q9BRP8 204 aaKnown RBP12.16□□□□□ -0.46
SNED1-211ENST00000491761 ARFGAP3Q9NP61 516 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 hCG_1642624A0A1W2PR95 340 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 KCNJ6P48051 423 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 NCAPHQ15003 741 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 ZNF174Q15697 407 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 ZNF827Q17R98 1081 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 FERMT2Q96AC1 680 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 CSRNP2Q9H175 543 aa12.16□□□□□ -0.46
SNED1-211ENST00000491761 FAM217BQ9NTX9 383 aaPredicted RBP12.16□□□□□ -0.46
SNED1-211ENST00000491761 NAA30Q147X3 362 aaPredicted RBP12.15□□□□□ -0.46
SNED1-211ENST00000491761 E4F1Q66K89 784 aaPredicted RBP12.15□□□□□ -0.46
SNED1-211ENST00000491761 SPECC1LQ69YQ0 1117 aa12.15□□□□□ -0.46
SNED1-211ENST00000491761 DZIP1Q86YF9 867 aaKnown RBP12.15□□□□□ -0.46
SNED1-211ENST00000491761 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
SNED1-211ENST00000491761 GTPBP4Q9BZE4 634 aaKnown RBP12.15□□□□□ -0.46
SNED1-211ENST00000491761 CTAGE1Q96RT6 745 aa12.15□□□□□ -0.46
SNED1-211ENST00000491761 UBE2Q2LH0YL09 131 aa12.15□□□□□ -0.46
SNED1-211ENST00000491761 BAG6P46379 1132 aa12.15□□□□□ -0.46
SNED1-211ENST00000491761 ENOX1Q8TC92 643 aaKnown RBP12.15□□□□□ -0.46
SNED1-211ENST00000491761 NLRP3Q96P20 1036 aa12.15□□□□□ -0.46
SNED1-211ENST00000491761 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNED1-211ENST00000491761 USP17L12C9JPN9 530 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 USP17L21D6R901 530 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 RHOXF2BP0C7M4 288 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 PCP11498 1178 aaKnown RBP12.14□□□□□ -0.47
SNED1-211ENST00000491761 MNAT1P51948 309 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 TTC38Q5R3I4 469 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 FCHSD1Q86WN1 690 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 CCDC148Q8NFR7 591 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 RHOXF2Q9BQY4 288 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 FBXO2Q9UK22 296 aaPredicted RBP12.14□□□□□ -0.47
SNED1-211ENST00000491761 CAPN2P17655 700 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 GPIHBP1Q8IV16 184 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 DPF2Q92785 391 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 KAT14Q9H8E8 782 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 JADE2Q9NQC1 790 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 VWA3AA6NCI4 1184 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 FOXN1O15353 648 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 CAMTA2O94983 1202 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 PLCD1P51178 756 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms