RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 A0A1W2PRG0 241 aa15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 ADCY3O60266 1144 aa15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 IRX3P78415 501 aaPredicted RBP15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 IRF5Q13568 498 aa15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 C12orf60Q5U649 245 aa15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 USP17L2Q6R6M4 530 aa15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 SIAH1Q8IUQ4 282 aa15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 KBTBD3Q8NAB2 608 aa15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 PI4K2BQ8TCG2 481 aa15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 OSBP2Q969R2 916 aa15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 STRBPQ96SI9 672 aaKnown RBP15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 ATP8A2Q9NTI2 1148 aa15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
SEC61A1-206ENST00000491668 SALL3Q9BXA9 1300 aa15.28■□□□□ 0.04
SEC61A1-206ENST00000491668 USP17L12C9JPN9 530 aa15.28■□□□□ 0.04
SEC61A1-206ENST00000491668 USP17L21D6R901 530 aa15.28■□□□□ 0.04
SEC61A1-206ENST00000491668 CCL5P13501 91 aa15.28■□□□□ 0.04
SEC61A1-206ENST00000491668 Q3C1V9 767 aa15.28■□□□□ 0.04
SEC61A1-206ENST00000491668 KIAA1755Q5JYT7 1200 aa15.28■□□□□ 0.04
SEC61A1-206ENST00000491668 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
SEC61A1-206ENST00000491668 CLEC10AQ8IUN9 316 aa15.28■□□□□ 0.04
SEC61A1-206ENST00000491668 SLAIN1Q8ND83 568 aa15.28■□□□□ 0.04
SEC61A1-206ENST00000491668 SLC4A4Q9Y6R1 1079 aa15.28■□□□□ 0.04
SEC61A1-206ENST00000491668 CNMDO75829 334 aa15.27■□□□□ 0.04
SEC61A1-206ENST00000491668 AKR1B1P15121 316 aa15.27■□□□□ 0.04
SEC61A1-206ENST00000491668 VCAM1P19320 739 aa15.27■□□□□ 0.04
SEC61A1-206ENST00000491668 HDAC1Q13547 482 aaPredicted RBP15.27■□□□□ 0.04
SEC61A1-206ENST00000491668 PRPF38BQ5VTL8 546 aaKnown RBP15.27■□□□□ 0.04
SEC61A1-206ENST00000491668 CTR9Q6PD62 1173 aa15.27■□□□□ 0.04
SEC61A1-206ENST00000491668 PXYLP1Q8TE99 480 aa15.27■□□□□ 0.04
SEC61A1-206ENST00000491668 CCDC136Q96JN2 1154 aa15.27■□□□□ 0.04
SEC61A1-206ENST00000491668 FEZ1Q99689 392 aa15.27■□□□□ 0.04
SEC61A1-206ENST00000491668 UNC93B1Q9H1C4 597 aa15.27■□□□□ 0.04
SEC61A1-206ENST00000491668 GSG1L2A8MUP6 293 aa15.26■□□□□ 0.03
SEC61A1-206ENST00000491668 RNF113AO15541 343 aaKnown RBP15.26■□□□□ 0.03
SEC61A1-206ENST00000491668 INHAP05111 366 aa15.26■□□□□ 0.03
SEC61A1-206ENST00000491668 CDK8P49336 464 aa15.26■□□□□ 0.03
SEC61A1-206ENST00000491668 ZSCAN25Q6NSZ9 544 aa15.26■□□□□ 0.03
SEC61A1-206ENST00000491668 CATSPERGQ6ZRH7 1159 aa15.26■□□□□ 0.03
SEC61A1-206ENST00000491668 GPRC5AQ8NFJ5 357 aa15.26■□□□□ 0.03
SEC61A1-206ENST00000491668 COA7Q96BR5 231 aa15.26■□□□□ 0.03
SEC61A1-206ENST00000491668 PORCNQ9H237 461 aa15.26■□□□□ 0.03
SEC61A1-206ENST00000491668 CABP5Q9NP86 173 aa15.26■□□□□ 0.03
SEC61A1-206ENST00000491668 SWAP70Q9UH65 585 aa15.26■□□□□ 0.03
SEC61A1-206ENST00000491668 RLFQ13129 1914 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 TTC41PQ6P2S7 1318 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 USP17L15C9J2P7 530 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 USP17L13C9JLJ4 530 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 M0R2C6 588 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 MPHOSPH10O00566 681 aaKnown RBP15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 GJB1P08034 283 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 GJA8P48165 433 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 ERVK-9P63128 1117 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 ERVK-24P63145 666 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 C16orf86Q6ZW13 317 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 UBE2Q1Q7Z7E8 422 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 APPBP2Q92624 585 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 GPATCH3Q96I76 525 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 RNF208Q9H0X6 261 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 EPB41L4AQ9HCS5 686 aaPredicted RBP15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 BIN2Q9UBW5 565 aaPredicted RBP15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 TAOK2Q9UL54 1235 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 MYH8P13535 1937 aa15.25■□□□□ 0.03
SEC61A1-206ENST00000491668 USP14P54578 494 aa15.24■□□□□ 0.03
SEC61A1-206ENST00000491668 TRIM32Q13049 653 aa15.24■□□□□ 0.03
SEC61A1-206ENST00000491668 TMEM179Q6ZVK1 233 aa15.24■□□□□ 0.03
SEC61A1-206ENST00000491668 USP6NLQ92738 828 aa15.24■□□□□ 0.03
SEC61A1-206ENST00000491668 GCC1Q96CN9 775 aa15.24■□□□□ 0.03
SEC61A1-206ENST00000491668 SEC62Q99442 399 aaKnown RBP15.24■□□□□ 0.03
SEC61A1-206ENST00000491668 PAGR1Q9BTK6 254 aa15.24■□□□□ 0.03
SEC61A1-206ENST00000491668 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.24■□□□□ 0.03
SEC61A1-206ENST00000491668 RPAP3Q9H6T3 665 aaPredicted RBP15.24■□□□□ 0.03
SEC61A1-206ENST00000491668 RANBP2P49792 3224 aaKnown RBP15.23■□□□□ 0.03
SEC61A1-206ENST00000491668 GPAA1O43292 621 aa15.23■□□□□ 0.03
SEC61A1-206ENST00000491668 IGHDP01880 384 aa15.23■□□□□ 0.03
SEC61A1-206ENST00000491668 MX1P20591 662 aa15.23■□□□□ 0.03
SEC61A1-206ENST00000491668 SBK1Q52WX2 424 aa15.23■□□□□ 0.03
SEC61A1-206ENST00000491668 LBX2Q6XYB7 198 aa15.23■□□□□ 0.03
SEC61A1-206ENST00000491668 PAK6Q9NQU5 681 aaPredicted RBP15.23■□□□□ 0.03
SEC61A1-206ENST00000491668 PPP4R2Q9NY27 417 aa15.23■□□□□ 0.03
SEC61A1-206ENST00000491668 BTBD7Q9P203 1132 aa15.23■□□□□ 0.03
SEC61A1-206ENST00000491668 GREB1LQ9C091 1923 aaPredicted RBP15.22■□□□□ 0.03
SEC61A1-206ENST00000491668 SPDYE16A6NNV3 312 aaPredicted RBP15.22■□□□□ 0.03
SEC61A1-206ENST00000491668 GLRX3O76003 335 aaKnown RBP15.22■□□□□ 0.03
SEC61A1-206ENST00000491668 ZFYP08048 801 aaPredicted RBP15.22■□□□□ 0.03
SEC61A1-206ENST00000491668 UBXN2AP68543 259 aa15.22■□□□□ 0.03
SEC61A1-206ENST00000491668 MORN1Q5T089 497 aa15.22■□□□□ 0.03
SEC61A1-206ENST00000491668 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
SEC61A1-206ENST00000491668 TRIB2Q92519 343 aa15.22■□□□□ 0.03
SEC61A1-206ENST00000491668 CCDC17Q96LX7 622 aa15.22■□□□□ 0.03
SEC61A1-206ENST00000491668 TMX2Q9Y320 296 aa15.22■□□□□ 0.03
SEC61A1-206ENST00000491668 RABGAP1Q9Y3P9 1069 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms