RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 SSTR4P31391 388 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 CD97P48960 835 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 CDK5R2Q13319 367 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 MLECQ14165 292 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 GORABQ5T7V8 394 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 PRAMEF13Q5VWM6 474 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 OVOS1Q6IE37 1185 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 SEZ6L2Q6UXD5 910 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.37□□□□□ -1.39
RTN4-215ENST00000491592 GMIPQ9P107 970 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 STOML1Q9UBI4 398 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 PRKAG2Q9UGJ0 569 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 STRIP2Q9ULQ0 834 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 LRIG2O94898 1065 aa6.36□□□□□ -1.39
RTN4-215ENST00000491592 IRAK1P51617 712 aa6.36□□□□□ -1.39
RTN4-215ENST00000491592 YARSP54577 528 aaKnown RBP6.36□□□□□ -1.39
RTN4-215ENST00000491592 SF3A1Q15459 793 aaKnown RBP6.36□□□□□ -1.39
RTN4-215ENST00000491592 FBXW10Q5XX13 1052 aa6.36□□□□□ -1.39
RTN4-215ENST00000491592 LSRQ86X29 649 aaPredicted RBP6.36□□□□□ -1.39
RTN4-215ENST00000491592 MCF2L2Q86YR7 1114 aa6.36□□□□□ -1.39
RTN4-215ENST00000491592 TMEM40Q8WWA1 233 aa6.36□□□□□ -1.39
RTN4-215ENST00000491592 GMLQ99445 158 aa6.36□□□□□ -1.39
RTN4-215ENST00000491592 SRRTQ9BXP5 876 aaKnown RBP6.36□□□□□ -1.39
RTN4-215ENST00000491592 C1GALT1Q9NS00 363 aa6.36□□□□□ -1.39
RTN4-215ENST00000491592 MAFGO15525 162 aa6.35□□□□□ -1.39
RTN4-215ENST00000491592 COBLO75128 1261 aa6.35□□□□□ -1.39
RTN4-215ENST00000491592 CST3P01034 146 aaPredicted RBP6.35□□□□□ -1.39
RTN4-215ENST00000491592 IGLV1-40P01703 118 aa6.35□□□□□ -1.39
RTN4-215ENST00000491592 IRX6P78412 446 aaPredicted RBP6.35□□□□□ -1.39
RTN4-215ENST00000491592 HSP90AB4PQ58FF6 505 aa6.35□□□□□ -1.39
RTN4-215ENST00000491592 SLC6A19Q695T7 634 aa6.35□□□□□ -1.39
RTN4-215ENST00000491592 MCATQ8IVS2 390 aaKnown RBP6.35□□□□□ -1.39
RTN4-215ENST00000491592 SLFN12Q8IYM2 578 aa6.35□□□□□ -1.39
RTN4-215ENST00000491592 PLCD4Q9BRC7 762 aa6.35□□□□□ -1.39
RTN4-215ENST00000491592 FOXQ1Q9C009 403 aa6.35□□□□□ -1.39
RTN4-215ENST00000491592 TANGO6Q9C0B7 1094 aa6.35□□□□□ -1.39
RTN4-215ENST00000491592 ANTXR1Q9H6X2 564 aa6.35□□□□□ -1.39
RTN4-215ENST00000491592 WRNQ14191 1432 aaPredicted RBP eCLIP6.34□□□□□ -1.39
RTN4-215ENST00000491592 SSBP05455 408 aaKnown RBP eCLIP6.34□□□□□ -1.39
RTN4-215ENST00000491592 EIF6P56537 245 aaKnown RBP6.34□□□□□ -1.39
RTN4-215ENST00000491592 RNF43Q68DV7 783 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 NLRC3Q7RTR2 1065 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 TOP6BLQ8N6T0 577 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 XAGE3Q8WTP9 111 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 CYB5D2Q8WUJ1 264 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 CPLX3Q8WVH0 158 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 GATA6Q92908 595 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 SHDQ96IW2 340 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 TBC1D32Q96NH3 1257 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 NAP1L5Q96NT1 182 aaPredicted RBP6.34□□□□□ -1.39
RTN4-215ENST00000491592 MIPEPQ99797 713 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 DBNDD2Q9BQY9 259 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 KRTAP9-9Q9BYP9 154 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.39
RTN4-215ENST00000491592 UPK3BL1B0FP48 263 aa6.33□□□□□ -1.4
RTN4-215ENST00000491592 CHURC1-FNTBB4DL54 471 aa6.33□□□□□ -1.4
RTN4-215ENST00000491592 UPK3BL2E5RIL1 263 aa6.33□□□□□ -1.4
RTN4-215ENST00000491592 NFIAQ12857 509 aa6.33□□□□□ -1.4
RTN4-215ENST00000491592 LRRFIP1Q32MZ4 808 aaKnown RBP6.33□□□□□ -1.4
RTN4-215ENST00000491592 ARSHQ5FYA8 562 aa6.33□□□□□ -1.4
RTN4-215ENST00000491592 ZAR1Q86SH2 424 aa6.33□□□□□ -1.4
RTN4-215ENST00000491592 MFSD2AQ8NA29 543 aa6.33□□□□□ -1.4
RTN4-215ENST00000491592 RBBP8NLQ8NC74 664 aaPredicted RBP6.33□□□□□ -1.4
RTN4-215ENST00000491592 MFSD14AQ96MC6 490 aa6.33□□□□□ -1.4
RTN4-215ENST00000491592 FMNL2Q96PY5 1086 aa6.33□□□□□ -1.4
RTN4-215ENST00000491592 A0A0U1RQG5 324 aaPredicted RBP6.32□□□□□ -1.4
RTN4-215ENST00000491592 SLC22A31A6NKX4 558 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 KIAA1324LA8MWY0 1029 aaPredicted RBP6.32□□□□□ -1.4
RTN4-215ENST00000491592 TPD52L2O43399 206 aaKnown RBP6.32□□□□□ -1.4
RTN4-215ENST00000491592 FAM87AP0C7U9 286 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 RAG1P15918 1043 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 YBX3P16989 372 aaKnown RBP eCLIP6.32□□□□□ -1.4
RTN4-215ENST00000491592 ADMP35318 185 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 GRIK1P39086 918 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 GIPRP48546 466 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 CDCP2Q5VXM1 449 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 INTS5Q6P9B9 1019 aaKnown RBP6.32□□□□□ -1.4
RTN4-215ENST00000491592 PHACTR4Q8IZ21 702 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 FBXL6Q8N531 539 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 OR6P1Q8NGX9 317 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 ANAPC16Q96DE5 110 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 ATG4CQ96DT6 458 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 CRBNQ96SW2 442 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 DUSP23Q9BVJ7 150 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 CNNM2Q9H8M5 875 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 PRDM10Q9NQV6 1147 aa6.32□□□□□ -1.4
RTN4-215ENST00000491592 PPP1R1BQ9UD71 204 aaPredicted RBP6.32□□□□□ -1.4
RTN4-215ENST00000491592 TNFRSF10CO14798 259 aa6.31□□□□□ -1.4
RTN4-215ENST00000491592 LEFTY1O75610 366 aa6.31□□□□□ -1.4
RTN4-215ENST00000491592 SLITRK5O94991 958 aa6.31□□□□□ -1.4
RTN4-215ENST00000491592 F13BP05160 661 aa6.31□□□□□ -1.4
RTN4-215ENST00000491592 NME1P15531 152 aaKnown RBP6.31□□□□□ -1.4
RTN4-215ENST00000491592 POLR2BP30876 1174 aaKnown RBP6.31□□□□□ -1.4
RTN4-215ENST00000491592 ANAPC15P60006 121 aa6.31□□□□□ -1.4
RTN4-215ENST00000491592 LETMD1Q6P1Q0 360 aa6.31□□□□□ -1.4
RTN4-215ENST00000491592 ZNF765Q7L2R6 523 aa6.31□□□□□ -1.4
RTN4-215ENST00000491592 TAB3Q8N5C8 712 aaPredicted RBP6.31□□□□□ -1.4
RTN4-215ENST00000491592 GIMAP7Q8NHV1 300 aa6.31□□□□□ -1.4
RTN4-215ENST00000491592 TM9SF2Q99805 663 aa6.31□□□□□ -1.4
RTN4-215ENST00000491592 ZNF408Q9H9D4 720 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms