RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 HIBADHP31937 336 aaKnown RBP12.6□□□□□ -0.39
PCYT1A-216ENST00000491544 RGS3P49796 1198 aa12.6□□□□□ -0.39
PCYT1A-216ENST00000491544 COL9A2Q14055 689 aaPredicted RBP12.6□□□□□ -0.39
PCYT1A-216ENST00000491544 C15orf52Q6ZUT6 534 aaKnown RBP12.6□□□□□ -0.39
PCYT1A-216ENST00000491544 TDRD3Q9H7E2 651 aaKnown RBP12.6□□□□□ -0.39
PCYT1A-216ENST00000491544 JAG2Q9Y219 1238 aa12.6□□□□□ -0.39
PCYT1A-216ENST00000491544 NCOR2Q9Y618 2525 aa12.6□□□□□ -0.39
PCYT1A-216ENST00000491544 MYH7P12883 1935 aa12.6□□□□□ -0.39
PCYT1A-216ENST00000491544 DOCK3Q8IZD9 2030 aa12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 GRXCR1A8MXD5 290 aa12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 FRAT2O75474 233 aaPredicted RBP12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 ALADP13716 330 aa12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 INPP5BP32019 993 aa12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 CACNB2Q08289 660 aaPredicted RBP12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 CHAF1AQ13111 956 aaPredicted RBP12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 CCDC158Q5M9N0 1113 aa12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 ANKRD13CQ8N6S4 541 aa12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 SMCR8Q8TEV9 937 aaPredicted RBP12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 GPATCH3Q96I76 525 aa12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 COG5Q9UP83 839 aa12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 NDUFB9Q9Y6M9 179 aa12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 SALL3Q9BXA9 1300 aa12.59□□□□□ -0.39
PCYT1A-216ENST00000491544 DOCK2Q92608 1830 aa12.58□□□□□ -0.4
PCYT1A-216ENST00000491544 PTPN5P54829 565 aa12.58□□□□□ -0.4
PCYT1A-216ENST00000491544 TRIM60Q495X7 471 aa12.58□□□□□ -0.4
PCYT1A-216ENST00000491544 PI16Q6UXB8 463 aa12.58□□□□□ -0.4
PCYT1A-216ENST00000491544 CCDC129Q6ZRS4 1044 aa12.58□□□□□ -0.4
PCYT1A-216ENST00000491544 FBXO33Q7Z6M2 555 aa12.58□□□□□ -0.4
PCYT1A-216ENST00000491544 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
PCYT1A-216ENST00000491544 CD209Q9NNX6 404 aa12.58□□□□□ -0.4
PCYT1A-216ENST00000491544 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
PCYT1A-216ENST00000491544 ECHDC1Q9NTX5 307 aa12.58□□□□□ -0.4
PCYT1A-216ENST00000491544 GNL3LQ9NVN8 582 aaKnown RBP12.58□□□□□ -0.4
PCYT1A-216ENST00000491544 RPAP1Q9BWH6 1393 aaPredicted RBP12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 MAP4K4O95819 1239 aaPredicted RBP12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 UQCRFS1P1P0C7P4 283 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 ARID4AP29374 1257 aaPredicted RBP12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 MCAMP43121 646 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 TNNI2P48788 182 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 PDE1AP54750 535 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 FAM110CQ1W6H9 321 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 HFE2Q6ZVN8 426 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 DNAJC2Q99543 621 aaKnown RBP12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 BOLA2Q9H3K6 86 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 DAGLAQ9Y4D2 1042 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 DMXL1Q9Y485 3027 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 MYO9BQ13459 2157 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 UNC79Q9P2D8 2635 aa12.57□□□□□ -0.4
PCYT1A-216ENST00000491544 WDR87Q6ZQQ6 2873 aa12.56□□□□□ -0.4
PCYT1A-216ENST00000491544 IL1R1P14778 569 aa12.56□□□□□ -0.4
PCYT1A-216ENST00000491544 CYP2B6P20813 491 aa12.56□□□□□ -0.4
PCYT1A-216ENST00000491544 GJD3Q8N144 294 aa12.56□□□□□ -0.4
PCYT1A-216ENST00000491544 TDRD7Q8NHU6 1098 aaKnown RBP12.56□□□□□ -0.4
PCYT1A-216ENST00000491544 SLC45A1Q9Y2W3 748 aa12.56□□□□□ -0.4
PCYT1A-216ENST00000491544 PTPRZ1P23471 2315 aaPredicted RBP12.56□□□□□ -0.4
PCYT1A-216ENST00000491544 TTC41PQ6P2S7 1318 aa12.56□□□□□ -0.4
PCYT1A-216ENST00000491544 VPS13AQ96RL7 3174 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 TPRP12270 2363 aaKnown RBP12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 MED19A0JLT2 244 aaPredicted RBP12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 DNM1LO00429 736 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 ATP5JP18859 108 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 ZAP70P43403 619 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 ID4P47928 161 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 FPGSQ05932 587 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 SLC39A5Q6ZMH5 540 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 SPATA5Q8NB90 893 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 PI4K2BQ8TCG2 481 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 EDC3Q96F86 508 aaKnown RBP12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 CNTNAP3BQ96NU0 1288 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 CNTNAP3Q9BZ76 1288 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 HMG20BQ9P0W2 317 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 DENND2AQ9ULE3 1009 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 FRMPD3Q5JV73 1810 aa12.55□□□□□ -0.4
PCYT1A-216ENST00000491544 A0A0G2JLL6 359 aaPredicted RBP12.54□□□□□ -0.4
PCYT1A-216ENST00000491544 CXCL11O14625 94 aa12.54□□□□□ -0.4
PCYT1A-216ENST00000491544 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
PCYT1A-216ENST00000491544 ZKSCAN1P17029 563 aaPredicted RBP12.54□□□□□ -0.4
PCYT1A-216ENST00000491544 SNX17Q15036 470 aa12.54□□□□□ -0.4
PCYT1A-216ENST00000491544 PRRT2Q7Z6L0 340 aaPredicted RBP12.54□□□□□ -0.4
PCYT1A-216ENST00000491544 PLXNA1Q9UIW2 1896 aa12.54□□□□□ -0.4
PCYT1A-216ENST00000491544 MYH2Q9UKX2 1941 aa12.54□□□□□ -0.4
PCYT1A-216ENST00000491544 ACACBO00763 2458 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 PLXNB2O15031 1838 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 GOLIM4O00461 696 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 SEMA3EO15041 775 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 TTC22Q5TAA0 569 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 TBC1D9Q6ZT07 1266 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 FASTKD5Q7L8L6 764 aaKnown RBP12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 HLA-CQ95604 372 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 ZNF512BQ96KM6 892 aaPredicted RBP12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 MFSD14AQ96MC6 490 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 ZNF341Q9BYN7 854 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 NKX2-4Q9H2Z4 354 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 FAM86C1Q9NVL1 165 aa12.53□□□□□ -0.4
PCYT1A-216ENST00000491544 A0A0G2JMZ2 1700 aa12.52□□□□□ -0.41
PCYT1A-216ENST00000491544 TRIM6-TRIM34B2RNG4 842 aa12.52□□□□□ -0.41
PCYT1A-216ENST00000491544 DCXO43602 365 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms