RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 ATP2B2Q01814 1243 aa23.21■■□□□ 1.31
SEC22A-209ENST00000491366 ICA1Q05084 483 aa23.21■■□□□ 1.31
SEC22A-209ENST00000491366 MOGSQ13724 837 aa23.21■■□□□ 1.31
SEC22A-209ENST00000491366 ZYXQ15942 572 aaKnown RBP23.21■■□□□ 1.31
SEC22A-209ENST00000491366 FAM43AQ8N2R8 423 aa23.21■■□□□ 1.31
SEC22A-209ENST00000491366 ACER1Q8TDN7 264 aa23.21■■□□□ 1.31
SEC22A-209ENST00000491366 U3KPZ7 1027 aaPredicted RBP23.21■■□□□ 1.31
SEC22A-209ENST00000491366 USP17L10C9JJH3 530 aa23.2■■□□□ 1.3
SEC22A-209ENST00000491366 FOXN1O15353 648 aa23.2■■□□□ 1.3
SEC22A-209ENST00000491366 RANBP6O60518 1105 aaKnown RBP23.2■■□□□ 1.3
SEC22A-209ENST00000491366 TSPY3P0CV98 308 aa23.2■■□□□ 1.3
SEC22A-209ENST00000491366 TSPY8P0CW00 308 aa23.2■■□□□ 1.3
SEC22A-209ENST00000491366 BACE1P56817 501 aa23.2■■□□□ 1.3
SEC22A-209ENST00000491366 AKNAD1Q5T1N1 836 aa23.2■■□□□ 1.3
SEC22A-209ENST00000491366 MFSD6Q6ZSS7 791 aa23.2■■□□□ 1.3
SEC22A-209ENST00000491366 FASTKD5Q7L8L6 764 aaKnown RBP23.2■■□□□ 1.3
SEC22A-209ENST00000491366 LSG1Q9H089 658 aaKnown RBP23.2■■□□□ 1.3
SEC22A-209ENST00000491366 ALDH1A1P00352 501 aa23.19■■□□□ 1.3
SEC22A-209ENST00000491366 TFAP4Q01664 338 aa23.19■■□□□ 1.3
SEC22A-209ENST00000491366 STAG1Q8WVM7 1258 aa23.19■■□□□ 1.3
SEC22A-209ENST00000491366 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.19■■□□□ 1.3
SEC22A-209ENST00000491366 KANSL2Q9H9L4 492 aa23.19■■□□□ 1.3
SEC22A-209ENST00000491366 TMOD4Q9NZQ9 345 aa23.19■■□□□ 1.3
SEC22A-209ENST00000491366 RBM8AQ9Y5S9 174 aaKnown RBP23.19■■□□□ 1.3
SEC22A-209ENST00000491366 LAMA4Q16363 1823 aa23.18■■□□□ 1.3
SEC22A-209ENST00000491366 TSPY2A6NKD2 308 aa23.18■■□□□ 1.3
SEC22A-209ENST00000491366 CA12O43570 354 aa23.18■■□□□ 1.3
SEC22A-209ENST00000491366 ORC4O43929 436 aa23.18■■□□□ 1.3
SEC22A-209ENST00000491366 TBC1D8O95759 1140 aa23.18■■□□□ 1.3
SEC22A-209ENST00000491366 GPAT2Q6NUI2 795 aa23.18■■□□□ 1.3
SEC22A-209ENST00000491366 ANKRD23Q86SG2 305 aa23.18■■□□□ 1.3
SEC22A-209ENST00000491366 MAP4K1Q92918 833 aa23.18■■□□□ 1.3
SEC22A-209ENST00000491366 RNF41Q9H4P4 317 aaPredicted RBP23.18■■□□□ 1.3
SEC22A-209ENST00000491366 ARHGEF10LQ9HCE6 1279 aa23.18■■□□□ 1.3
SEC22A-209ENST00000491366 SAGE1Q9NXZ1 904 aa23.18■■□□□ 1.3
SEC22A-209ENST00000491366 NEDD4P46934 1319 aa23.17■■□□□ 1.3
SEC22A-209ENST00000491366 A0A1W2PRG0 241 aa23.17■■□□□ 1.3
SEC22A-209ENST00000491366 C19orf81C9J6K1 198 aa23.17■■□□□ 1.3
SEC22A-209ENST00000491366 PDHXO00330 501 aa23.17■■□□□ 1.3
SEC22A-209ENST00000491366 FGRP09769 529 aa23.17■■□□□ 1.3
SEC22A-209ENST00000491366 EEF2P13639 858 aaKnown RBP23.17■■□□□ 1.3
SEC22A-209ENST00000491366 SH3D19Q5HYK7 790 aa23.17■■□□□ 1.3
SEC22A-209ENST00000491366 TREML2Q5T2D2 321 aa23.17■■□□□ 1.3
SEC22A-209ENST00000491366 USP17L2Q6R6M4 530 aa23.17■■□□□ 1.3
SEC22A-209ENST00000491366 PTPRFP10586 1907 aa23.16■■□□□ 1.3
SEC22A-209ENST00000491366 PCNTO95613 3336 aa23.16■■□□□ 1.3
SEC22A-209ENST00000491366 TAF1CQ15572 869 aaPredicted RBP23.16■■□□□ 1.3
SEC22A-209ENST00000491366 SIAH1Q8IUQ4 282 aa23.16■■□□□ 1.3
SEC22A-209ENST00000491366 PROCA1Q8NCQ7 364 aaPredicted RBP23.16■■□□□ 1.3
SEC22A-209ENST00000491366 NEDD1Q8NHV4 660 aa23.16■■□□□ 1.3
SEC22A-209ENST00000491366 KIAA1683Q9H0B3 1180 aa23.16■■□□□ 1.3
SEC22A-209ENST00000491366 EMILIN3Q9NT22 766 aa23.16■■□□□ 1.3
SEC22A-209ENST00000491366 CYP21A2P08686 494 aa23.15■■□□□ 1.3
SEC22A-209ENST00000491366 PCP11498 1178 aaKnown RBP23.15■■□□□ 1.3
SEC22A-209ENST00000491366 USP14P54578 494 aa23.15■■□□□ 1.3
SEC22A-209ENST00000491366 CRHR2Q13324 411 aa23.15■■□□□ 1.3
SEC22A-209ENST00000491366 CEP95Q96GE4 821 aa23.15■■□□□ 1.3
SEC22A-209ENST00000491366 R3HDMLQ9H3Y0 253 aa23.15■■□□□ 1.3
SEC22A-209ENST00000491366 SH2D4AQ9H788 454 aa23.15■■□□□ 1.3
SEC22A-209ENST00000491366 AGTPBP1Q9UPW5 1226 aa23.15■■□□□ 1.3
SEC22A-209ENST00000491366 PLIN4Q96Q06 1357 aa23.14■■□□□ 1.3
SEC22A-209ENST00000491366 GREB1LQ9C091 1923 aaPredicted RBP23.14■■□□□ 1.3
SEC22A-209ENST00000491366 IGKV6D-41A0A0C4DH26 115 aa23.14■■□□□ 1.29
SEC22A-209ENST00000491366 NMT2O60551 498 aa23.14■■□□□ 1.29
SEC22A-209ENST00000491366 HSPA8P11142 646 aaKnown RBP23.14■■□□□ 1.29
SEC22A-209ENST00000491366 CTCFP49711 727 aaPredicted RBP23.14■■□□□ 1.29
SEC22A-209ENST00000491366 LOC285556D6RIA3 1793 aa23.14■■□□□ 1.29
SEC22A-209ENST00000491366 RAD21O60216 631 aa23.13■■□□□ 1.29
SEC22A-209ENST00000491366 NKX2-3Q8TAU0 364 aa23.13■■□□□ 1.29
SEC22A-209ENST00000491366 ESR2Q92731 530 aa23.13■■□□□ 1.29
SEC22A-209ENST00000491366 ZFYVE28Q9HCC9 887 aa23.13■■□□□ 1.29
SEC22A-209ENST00000491366 ZCCHC17Q9NP64 241 aaKnown RBP23.13■■□□□ 1.29
SEC22A-209ENST00000491366 MTMR4Q9NYA4 1195 aa23.13■■□□□ 1.29
SEC22A-209ENST00000491366 CLIP2Q9UDT6 1046 aa23.13■■□□□ 1.29
SEC22A-209ENST00000491366 TMX2Q9Y320 296 aa23.13■■□□□ 1.29
SEC22A-209ENST00000491366 TAF6LQ9Y6J9 622 aa23.13■■□□□ 1.29
SEC22A-209ENST00000491366 B4E1Z4 1266 aa23.12■■□□□ 1.29
SEC22A-209ENST00000491366 KDM4AO75164 1064 aa23.12■■□□□ 1.29
SEC22A-209ENST00000491366 CYP2C8P10632 490 aa23.12■■□□□ 1.29
SEC22A-209ENST00000491366 LBX1P52954 281 aa23.12■■□□□ 1.29
SEC22A-209ENST00000491366 NYAP2Q9P242 653 aa23.12■■□□□ 1.29
SEC22A-209ENST00000491366 TTLL1O95922 423 aa23.11■■□□□ 1.29
SEC22A-209ENST00000491366 VCAM1P19320 739 aa23.11■■□□□ 1.29
SEC22A-209ENST00000491366 PABPC4Q13310 644 aaKnown RBP eCLIP23.11■■□□□ 1.29
SEC22A-209ENST00000491366 SPICE1Q8N0Z3 855 aa23.11■■□□□ 1.29
SEC22A-209ENST00000491366 LRRC47Q8N1G4 583 aaKnown RBP23.11■■□□□ 1.29
SEC22A-209ENST00000491366 C12orf42Q96LP6 360 aa23.11■■□□□ 1.29
SEC22A-209ENST00000491366 PARK7Q99497 189 aaKnown RBP23.11■■□□□ 1.29
SEC22A-209ENST00000491366 KRT23Q9C075 422 aa23.11■■□□□ 1.29
SEC22A-209ENST00000491366 CNNM2Q9H8M5 875 aa23.11■■□□□ 1.29
SEC22A-209ENST00000491366 IL17RBQ9NRM6 502 aa23.11■■□□□ 1.29
SEC22A-209ENST00000491366 STX8Q9UNK0 236 aa23.11■■□□□ 1.29
SEC22A-209ENST00000491366 SLC45A1Q9Y2W3 748 aa23.11■■□□□ 1.29
SEC22A-209ENST00000491366 SLC27A2O14975 620 aa23.1■■□□□ 1.29
SEC22A-209ENST00000491366 KIAA1755Q5JYT7 1200 aa23.1■■□□□ 1.29
SEC22A-209ENST00000491366 CREB3L3Q68CJ9 461 aa23.1■■□□□ 1.29
SEC22A-209ENST00000491366 ZKSCAN3Q9BRR0 538 aa23.1■■□□□ 1.29
SEC22A-209ENST00000491366 CFHR5Q9BXR6 569 aa23.1■■□□□ 1.29
SEC22A-209ENST00000491366 VCPKMTQ9H867 229 aa23.1■■□□□ 1.29
SEC22A-209ENST00000491366 GOPCQ9HD26 462 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms