RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 DCP1AQ9NPI6 582 aaPredicted RBP2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 ZMYM5Q9UJ78 669 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 CEP131Q9UPN4 1083 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 CNTNAP4Q9C0A0 1308 aa2.96□□□□□ -1.93
SNRNP40-207ENST00000491106 PAPLNO95428 1278 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 ITGB5P18084 799 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 TFE3P19532 575 aaPredicted RBP2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 PDE6BP35913 854 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 KIR3DL1P43629 444 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 DAB2P98082 770 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 RING1Q06587 406 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 TNK2Q07912 1038 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 CAMK2GQ13555 558 aaPredicted RBP2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 FYB2Q5VWT5 728 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 BNC2Q6ZN30 1099 aaPredicted RBP2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 NFXL1Q6ZNB6 911 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 MCATQ8IVS2 390 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 GOLM1Q8NBJ4 401 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 DHX38Q92620 1227 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 COX4I2Q96KJ9 171 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 FAM84AQ96KN4 292 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 ALPK1Q96QP1 1244 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 BCL2L13Q9BXK5 485 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 TNKS2Q9H2K2 1166 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 NSUN3Q9H649 340 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 TJP2Q9UDY2 1190 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 DUSP13Q9UII6 198 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 CORINQ9Y5Q5 1042 aa2.96□□□□□ -1.94
SNRNP40-207ENST00000491106 PITPNM2Q9BZ72 1349 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 A0A1W2PQ27 194 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 A0A1W2PQ64 194 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 A0A1W2PQC6 194 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 A0A1W2PQD8 194 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 ZBTB7CA1YPR0 619 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 WASH4PA8MWX3 477 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 GFRA2O00451 464 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 GLI1P08151 1106 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 RAG1P15918 1043 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 RPL10P27635 214 aaKnown RBP2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 GDNFP39905 211 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 EGR3Q06889 387 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 SLC14A2Q15849 920 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 CWF19L2Q2TBE0 894 aaKnown RBP2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 FBXW10Q5XX13 1052 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 PRR23BQ6ZRT6 265 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 FAM214BQ7L5A3 538 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 SPPL2CQ8IUH8 684 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 SIRT2Q8IXJ6 389 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 OXR1Q8N573 874 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 POU5F2Q8N7G0 328 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 ZSCAN18Q8TBC5 510 aaPredicted RBP2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 CCDC74BQ96LY2 380 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 KIF2CQ99661 725 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 NOC4LQ9BVI4 516 aaKnown RBP2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 ADAMTS10Q9H324 1103 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 GGT7Q9UJ14 662 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 CTNND2Q9UQB3 1225 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 CAPN6Q9Y6Q1 641 aa2.95□□□□□ -1.94
SNRNP40-207ENST00000491106 CARMIL2Q6F5E8 1435 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 ABCC9O60706 1549 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 DBX1A6NMT0 343 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 CHURC1-FNTBB4DL54 471 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 LRRN2O75325 713 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 F13A1P00488 732 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 NTF4P34130 210 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 RALGPS1Q5JS13 557 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 TMPRSS7Q7RTY8 843 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 TMC4Q7Z404 712 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 THAP5Q7Z6K1 395 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 KRTAP1-3Q8IUG1 177 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 MRPL41Q8IXM3 137 aaKnown RBP2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 PHC3Q8NDX5 983 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 BAHD1Q8TBE0 780 aaPredicted RBP2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 PIWIL2Q8TC59 973 aaKnown RBP2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 GATAD2BQ8WXI9 593 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 GAL3ST3Q96A11 431 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 ACSF2Q96CM8 615 aaPredicted RBP2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 TMEM74Q96NL1 305 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 TOX2Q96NM4 488 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 PPP1R16BQ96T49 567 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 C19orf44Q9H6X5 657 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 SEMA3GQ9NS98 782 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 CACNA2D2Q9NY47 1150 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 REV1Q9UBZ9 1251 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 ADAM30Q9UKF2 790 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 FBXL21Q9UKT6 434 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 TACC3Q9Y6A5 838 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 USP31Q70CQ4 1352 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 TNIKQ9UKE5 1360 aa2.94□□□□□ -1.94
SNRNP40-207ENST00000491106 CECR2Q9BXF3 1484 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 DNAJC25-GNG10A0A024R161 153 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 A0A1W2PQJ5 194 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 FAM86C2PA6NEL3 165 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 TCAF2A6NFQ2 919 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 MEIS1O00470 390 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 ZNF865P0CJ78 1059 aaPredicted RBP2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 ERCC3P19447 782 aa2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 TRHRP34981 398 aaPredicted RBP2.93□□□□□ -1.94
SNRNP40-207ENST00000491106 ST13P50502 369 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms