RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 HLA-DOAP06340 250 aa18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 GNAI3P08754 354 aa18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 PLCG2P16885 1265 aa18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 VCAM1P19320 739 aa18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 GJC2Q5T442 439 aaPredicted RBP18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 MAFAQ8NHW3 353 aaPredicted RBP18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 DBNDD2Q9BQY9 259 aa18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 PIH1D3Q9NQM4 214 aaKnown RBP18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 BTBD7Q9P203 1132 aa18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 TNNQ9UQP3 1299 aa18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 RABGAP1Q9Y3P9 1069 aa18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 DNM1LO00429 736 aa18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 CYP2E1P05181 493 aaPredicted RBP18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 PTPREP23469 700 aa18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 PPP4CP60510 307 aa18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 CCNA1P78396 465 aa18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 GRB14Q14449 540 aa18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 RAB3GAP1Q15042 981 aa18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 SHHQ15465 462 aa18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 FOXP4Q8IVH2 680 aaPredicted RBP18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 MIGA1Q8NAN2 632 aa18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 ACER1Q8TDN7 264 aa18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 MYLIPQ8WY64 445 aa18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 LPAR1Q92633 364 aa18.79■□□□□ 0.6
SCAMP3-208ENST00000490999 SLC15A5A6NIM6 579 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 USP17L15C9J2P7 530 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 USP17L13C9JLJ4 530 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 USP17L11C9JVI0 530 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 USP17L18D6R9N7 530 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 USP17L22D6RA61 530 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 USP17L17D6RBQ6 530 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 USP17L19D6RCP7 530 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 USP17L20D6RJB6 530 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 GLRX3O76003 335 aaKnown RBP18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 ATP2B2Q01814 1243 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 USP17L24Q0WX57 530 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 G3BP1Q13283 466 aaKnown RBP eCLIP18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 C12orf42Q96LP6 360 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 GINM1Q9NU53 330 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 IVNS1ABPQ9Y6Y0 642 aa18.78■□□□□ 0.6
SCAMP3-208ENST00000490999 SPDYE16A6NNV3 312 aaPredicted RBP18.77■□□□□ 0.6
SCAMP3-208ENST00000490999 CYBAP13498 195 aa18.77■□□□□ 0.6
SCAMP3-208ENST00000490999 ZAP70P43403 619 aa18.77■□□□□ 0.6
SCAMP3-208ENST00000490999 TRIM60Q495X7 471 aa18.77■□□□□ 0.6
SCAMP3-208ENST00000490999 TTYH1Q9H313 450 aaPredicted RBP18.77■□□□□ 0.6
SCAMP3-208ENST00000490999 MSCO60682 206 aa18.76■□□□□ 0.59
SCAMP3-208ENST00000490999 HOXC6P09630 235 aa18.76■□□□□ 0.59
SCAMP3-208ENST00000490999 RARSP54136 660 aaKnown RBP18.76■□□□□ 0.59
SCAMP3-208ENST00000490999 TNNI3KQ59H18 835 aa18.76■□□□□ 0.59
SCAMP3-208ENST00000490999 CATSPERGQ6ZRH7 1159 aa18.76■□□□□ 0.59
SCAMP3-208ENST00000490999 TRMT2AQ8IZ69 625 aaKnown RBP18.76■□□□□ 0.59
SCAMP3-208ENST00000490999 BADQ92934 168 aa18.76■□□□□ 0.59
SCAMP3-208ENST00000490999 RPAP3Q9H6T3 665 aaPredicted RBP18.76■□□□□ 0.59
SCAMP3-208ENST00000490999 TLR7Q9NYK1 1049 aaKnown RBP18.76■□□□□ 0.59
SCAMP3-208ENST00000490999 FPGT-TNNI3KV9GXZ4 949 aa18.76■□□□□ 0.59
SCAMP3-208ENST00000490999 GNAI2P04899 355 aa18.75■□□□□ 0.59
SCAMP3-208ENST00000490999 CYP7A1P22680 504 aa18.75■□□□□ 0.59
SCAMP3-208ENST00000490999 ATF7IPQ6VMQ6 1270 aa18.75■□□□□ 0.59
SCAMP3-208ENST00000490999 SH3RF1Q7Z6J0 888 aa18.75■□□□□ 0.59
SCAMP3-208ENST00000490999 SEMA6BQ9H3T3 888 aa18.75■□□□□ 0.59
SCAMP3-208ENST00000490999 PDLIM7Q9NR12 457 aa18.75■□□□□ 0.59
SCAMP3-208ENST00000490999 ADORA2AP29274 412 aa18.74■□□□□ 0.59
SCAMP3-208ENST00000490999 USP5P45974 858 aa18.74■□□□□ 0.59
SCAMP3-208ENST00000490999 OS9Q13438 667 aaPredicted RBP18.74■□□□□ 0.59
SCAMP3-208ENST00000490999 ABCB5Q2M3G0 1257 aa18.74■□□□□ 0.59
SCAMP3-208ENST00000490999 CCDC158Q5M9N0 1113 aa18.74■□□□□ 0.59
SCAMP3-208ENST00000490999 TATDN1Q6P1N9 297 aa18.74■□□□□ 0.59
SCAMP3-208ENST00000490999 FERMT2Q96AC1 680 aa18.74■□□□□ 0.59
SCAMP3-208ENST00000490999 KIAA1683Q9H0B3 1180 aa18.74■□□□□ 0.59
SCAMP3-208ENST00000490999 SERPINB13Q9UIV8 391 aa18.74■□□□□ 0.59
SCAMP3-208ENST00000490999 MYO5AQ9Y4I1 1855 aaKnown RBP18.73■□□□□ 0.59
SCAMP3-208ENST00000490999 KBTBD13C9JR72 458 aa18.73■□□□□ 0.59
SCAMP3-208ENST00000490999 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
SCAMP3-208ENST00000490999 CT47B1P0C2W7 299 aaPredicted RBP18.73■□□□□ 0.59
SCAMP3-208ENST00000490999 FOSL2P15408 326 aa18.73■□□□□ 0.59
SCAMP3-208ENST00000490999 USP14P54578 494 aa18.73■□□□□ 0.59
SCAMP3-208ENST00000490999 EVX2Q03828 476 aa18.73■□□□□ 0.59
SCAMP3-208ENST00000490999 SLC39A5Q6ZMH5 540 aa18.73■□□□□ 0.59
SCAMP3-208ENST00000490999 TRIM43BA6NCK2 446 aa18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 ZNF316A6NFI3 1004 aaPredicted RBP18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 IGHA2P01877 340 aa18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 TRIM27P14373 513 aa18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 SHMT1P34896 483 aa18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 CERKLQ49MI3 558 aaPredicted RBP18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 LBX2Q6XYB7 198 aa18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 DPP9Q86TI2 863 aa18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 CLUAP1Q96AJ1 413 aa18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 TRIM43Q96BQ3 446 aaPredicted RBP18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 MOV10L1Q9BXT6 1211 aaKnown RBP18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 DBNLQ9UJU6 430 aaKnown RBP18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 ZNF236Q9UL36 1845 aa18.72■□□□□ 0.59
SCAMP3-208ENST00000490999 RLFQ13129 1914 aa18.71■□□□□ 0.59
SCAMP3-208ENST00000490999 GUCY1A2P33402 732 aa18.71■□□□□ 0.59
SCAMP3-208ENST00000490999 ADCYAP1R1P41586 468 aa18.71■□□□□ 0.59
SCAMP3-208ENST00000490999 FAM47AQ5JRC9 791 aa18.71■□□□□ 0.59
SCAMP3-208ENST00000490999 PRAMEF19Q5SWL8 479 aa18.71■□□□□ 0.59
SCAMP3-208ENST00000490999 MAGEB6Q8N7X4 407 aa18.71■□□□□ 0.59
SCAMP3-208ENST00000490999 TANGO6Q9C0B7 1094 aa18.71■□□□□ 0.59
SCAMP3-208ENST00000490999 EHD4Q9H223 541 aa18.71■□□□□ 0.59
SCAMP3-208ENST00000490999 A0A0G2JMZ2 1700 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms