RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 STK24Q9Y6E0 443 aa8.33□□□□□ -1.08
NPHP3-208ENST00000490993 AFF2P51816 1311 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 hCG_1984214I3L0E3 225 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 MCTP2Q6DN12 878 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 DGKHQ86XP1 1220 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 ZNF713Q8N859 430 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-208ENST00000490993 TRIM47Q96LD4 638 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 NAP1L1P55209 391 aaKnown RBP8.32□□□□□ -1.08
NPHP3-208ENST00000490993 GTF2IP78347 998 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 FANCCQ00597 558 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 CT47A1Q5JQC4 288 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-208ENST00000490993 CEP89Q96ST8 783 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 PPP1R12BO60237 982 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-208ENST00000490993 TEX35Q5T0J7 233 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 SH3GLB2Q9NR46 395 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 LAD1O00515 517 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 ORC4O43929 436 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 MTIF2P46199 727 aaKnown RBP8.32□□□□□ -1.08
NPHP3-208ENST00000490993 KCNQ4P56696 695 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 IQCEQ6IPM2 695 aa8.32□□□□□ -1.08
NPHP3-208ENST00000490993 NOC3LQ8WTT2 800 aaKnown RBP8.32□□□□□ -1.08
NPHP3-208ENST00000490993 GPHNQ9NQX3 736 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-208ENST00000490993 ADCY7P51828 1080 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 CAGE1Q8TC20 777 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 AGXT2Q9BYV1 514 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 COA1Q9GZY4 146 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 TRMT1Q9NXH9 659 aaKnown RBP8.31□□□□□ -1.08
NPHP3-208ENST00000490993 IKBKBO14920 756 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 PDLIM2Q96JY6 352 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 SH2D4AQ9H788 454 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 USP40Q9NVE5 1235 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 CGNQ9P2M7 1197 aaKnown RBP8.31□□□□□ -1.08
NPHP3-208ENST00000490993 TTF2Q9UNY4 1162 aaKnown RBP8.31□□□□□ -1.08
NPHP3-208ENST00000490993 COL14A1Q05707 1796 aaKnown RBP8.31□□□□□ -1.08
NPHP3-208ENST00000490993 NPR1P16066 1061 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 LONP1P36776 959 aaKnown RBP8.31□□□□□ -1.08
NPHP3-208ENST00000490993 ASIC1P78348 528 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 TRIM14Q14142 442 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 SPA17Q15506 151 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 UBXN4Q92575 508 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 CNKSR1Q969H4 720 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 PGBD1Q96JS3 809 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 SERTAD1Q9UHV2 236 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 TRPM3Q9HCF6 1732 aaPredicted RBP8.31□□□□□ -1.08
NPHP3-208ENST00000490993 RBM10P98175 930 aaKnown RBP8.31□□□□□ -1.08
NPHP3-208ENST00000490993 STXBP4Q6ZWJ1 553 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 KIAA1328Q86T90 577 aa8.31□□□□□ -1.08
NPHP3-208ENST00000490993 ZNF579Q8NAF0 562 aaKnown RBP8.31□□□□□ -1.08
NPHP3-208ENST00000490993 LETM2Q2VYF4 491 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 FBXO33Q7Z6M2 555 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 SRRTQ9BXP5 876 aaKnown RBP8.3□□□□□ -1.08
NPHP3-208ENST00000490993 SRPRBQ9Y5M8 271 aaKnown RBP8.3□□□□□ -1.08
NPHP3-208ENST00000490993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.3□□□□□ -1.08
NPHP3-208ENST00000490993 ALS2Q96Q42 1657 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 ERLIN1O75477 346 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 EVCP57679 992 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 PNOCQ13519 176 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 SV2BQ7L1I2 683 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 FAM177A1Q8N128 213 aaPredicted RBP8.3□□□□□ -1.08
NPHP3-208ENST00000490993 CMTR1Q8N1G2 835 aaKnown RBP8.3□□□□□ -1.08
NPHP3-208ENST00000490993 IGDCC4Q8TDY8 1250 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 CCDC17Q96LX7 622 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 MAGEF1Q9HAY2 307 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 ANAPC4Q9UJX5 808 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 PCDHA4Q9UN74 947 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 SPDYE3A6NKU9 549 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 KLRF2D3W0D1 207 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 TRIM37O94972 964 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 IDEP14735 1019 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 TNNI2P48788 182 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 SBK1Q52WX2 424 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 TMTC3Q6ZXV5 915 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 CNGA4Q8IV77 575 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 DCP1AQ9NPI6 582 aaPredicted RBP8.3□□□□□ -1.08
NPHP3-208ENST00000490993 PDS5AQ29RF7 1337 aaKnown RBP8.3□□□□□ -1.08
NPHP3-208ENST00000490993 CCNT1O60563 726 aaKnown RBP8.3□□□□□ -1.08
NPHP3-208ENST00000490993 ASPRV1Q53RT3 343 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 CTR9Q6PD62 1173 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 REXO1Q8N1G1 1221 aaKnown RBP8.3□□□□□ -1.08
NPHP3-208ENST00000490993 EHBP1Q8NDI1 1231 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 TAF6LQ9Y6J9 622 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 SYNRGQ9UMZ2 1314 aa8.3□□□□□ -1.08
NPHP3-208ENST00000490993 SNAP23O00161 211 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 ANTXR2P58335 489 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 RESP18Q5W5W9 173 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 CPLX3Q8WVH0 158 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 NSUN4Q96CB9 384 aaKnown RBP8.29□□□□□ -1.08
NPHP3-208ENST00000490993 BPIFA3Q9BQP9 254 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 SUGT1Q9Y2Z0 365 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 SMCO2A6NFE2 343 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 CHGBP05060 677 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 NFIXQ14938 502 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 NOM1Q5C9Z4 860 aaKnown RBP8.29□□□□□ -1.08
NPHP3-208ENST00000490993 SPECC1Q5M775 1068 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 CNNM4Q6P4Q7 775 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 SARM1Q6SZW1 724 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 C2CD5Q86YS7 1000 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 ARHGEF10LQ9HCE6 1279 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 GPCPD1Q9NPB8 672 aa8.29□□□□□ -1.08
NPHP3-208ENST00000490993 PPP1R1BQ9UD71 204 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms