RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ZSWIM6Q9HCJ5 1215 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 CCPG1Q9ULG6 757 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 ARHGEF35A5YM69 484 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 FOXO4P98177 505 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 SPAG1Q07617 926 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 GNPTABQ3T906 1256 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 GTF3C6Q969F1 213 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 IMPG2Q9BZV3 1241 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 ARHGAP23Q9P227 1491 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 VWDEQ8N2E2 1590 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 USP42Q9H9J4 1324 aaKnown RBP16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 SLIT1O75093 1534 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 SNX29Q8TEQ0 813 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 GLG1Q92896 1179 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 FAM84BQ96KN1 310 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 CCDC65Q8IXS2 484 aa16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 LSG1Q9H089 658 aaKnown RBP16.24■□□□□ 0.19
ARHGEF39-205ENST00000490638 STX17P56962 302 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 PNMA2Q9UL42 364 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 MED23Q9ULK4 1368 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 ASNSP08243 561 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 CNGA1P29973 690 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 CCNA1P78396 465 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 ADCK5Q3MIX3 580 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 STRBPQ96SI9 672 aaKnown RBP16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 CCDC169A6NNP5 214 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 HARSP12081 509 aaKnown RBP16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 AMNQ9BXJ7 453 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 USP14P54578 494 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 KCTD2Q14681 263 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 CALCRLQ16602 461 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 ARHGEF16Q5VV41 709 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 ATP6V0A2Q9Y487 856 aa16.23■□□□□ 0.19
ARHGEF39-205ENST00000490638 GCOM1H8Y6P7 765 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 POLR2MP0CAP2 368 aa16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 SCG2P13521 617 aa16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 MAP3K9P80192 1104 aa16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 TMC6Q7Z403 805 aa16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 TBC1D16Q8TBP0 767 aa16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 RICTORQ6R327 1708 aa16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 MAEAQ7L5Y9 396 aa16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 GPKOWQ92917 476 aaPredicted RBP eCLIP16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 RIPOR2Q9Y4F9 1068 aa16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 PI4K2BQ8TCG2 481 aa16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 TPCN1Q9ULQ1 816 aa16.22■□□□□ 0.19
ARHGEF39-205ENST00000490638 GAS7O60861 476 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 DDAH1O94760 285 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 BMP3P12645 472 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 SPECC1Q5M775 1068 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 APOA5Q6Q788 366 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 KCTD1Q719H9 257 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 DPP9Q86TI2 863 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 BLIDQ8IZY5 108 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 MLXIPQ9HAP2 919 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 ZNRF3Q9ULT6 936 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 MCF2L2Q86YR7 1114 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 SH3RF3Q8TEJ3 882 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 CEMIPQ8WUJ3 1361 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 RABL6Q3YEC7 729 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 ANO6Q4KMQ2 910 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 COL23A1Q86Y22 540 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 DHX37Q8IY37 1157 aaKnown RBP16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 DNAJC25Q9H1X3 360 aa16.21■□□□□ 0.19
ARHGEF39-205ENST00000490638 GH2P01242 217 aa16.21■□□□□ 0.18
ARHGEF39-205ENST00000490638 CDK8P49336 464 aa16.21■□□□□ 0.18
ARHGEF39-205ENST00000490638 SMTNP53814 917 aa16.21■□□□□ 0.18
ARHGEF39-205ENST00000490638 CCDC125Q86Z20 511 aa16.21■□□□□ 0.18
ARHGEF39-205ENST00000490638 IFT74Q96LB3 600 aa16.21■□□□□ 0.18
ARHGEF39-205ENST00000490638 ZSWIM5Q9P217 1185 aa16.21■□□□□ 0.18
ARHGEF39-205ENST00000490638 KCNH3Q9ULD8 1083 aa16.21■□□□□ 0.18
ARHGEF39-205ENST00000490638 SLC16A2P36021 539 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 UBASH3AP57075 661 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 SLFNL1Q499Z3 407 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 C2orf69Q8N8R5 385 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 AKR1B10O60218 316 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 NTSR2O95665 410 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 DPEP1P16444 411 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 ASPRV1Q53RT3 343 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 DNM3Q9UQ16 869 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 GRIN3BO60391 1043 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 PFKFB2O60825 505 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 PDIA3P30101 505 aaKnown RBP16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 ARHGEF6Q15052 776 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 FAM47CQ5HY64 1035 aa16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 INTS5Q6P9B9 1019 aaKnown RBP16.2■□□□□ 0.18
ARHGEF39-205ENST00000490638 IQCA1LA6NCM1 817 aa16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 POLR2DO15514 142 aaKnown RBP16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 NEMFO60524 1076 aa16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 PLA2G12BQ9BX93 195 aa16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 FAM196BA6NMK8 535 aa16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 BTBD18B2RXH4 712 aa16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 DNA2P51530 1060 aa16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 INF2Q27J81 1249 aa16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 PRR16Q569H4 304 aa16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 CDC37L1Q7L3B6 337 aa16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 KRT26Q7Z3Y9 468 aa16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 GTPBP4Q9BZE4 634 aaKnown RBP16.19■□□□□ 0.18
ARHGEF39-205ENST00000490638 ELP1O95163 1332 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms