RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 FAM151AQ8WW52 585 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 BICC1Q9H694 974 aaKnown RBP11.3□□□□□ -0.6
SRRM1-217ENST00000490543 STAP2Q9UGK3 403 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 PCDHGC3Q9UN70 934 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 COL6A3P12111 3177 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 RPAP1Q9BWH6 1393 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-217ENST00000490543 ADCY3O60266 1144 aa11.29□□□□□ -0.6
SRRM1-217ENST00000490543 FLT3LGP49771 235 aa11.29□□□□□ -0.6
SRRM1-217ENST00000490543 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
SRRM1-217ENST00000490543 RABL6Q3YEC7 729 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-217ENST00000490543 DEFB118Q96PH6 123 aa11.29□□□□□ -0.6
SRRM1-217ENST00000490543 PARK7Q99497 189 aaKnown RBP11.29□□□□□ -0.6
SRRM1-217ENST00000490543 SLC24A3Q9HC58 644 aa11.29□□□□□ -0.6
SRRM1-217ENST00000490543 DAGLAQ9Y4D2 1042 aa11.29□□□□□ -0.6
SRRM1-217ENST00000490543 LAMA3Q16787 3333 aa11.29□□□□□ -0.6
SRRM1-217ENST00000490543 MOXD2PA6NHM9 499 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 CXCL11O14625 94 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 TFRCP02786 760 aaKnown RBP11.28□□□□□ -0.6
SRRM1-217ENST00000490543 INHAP05111 366 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 SLURP2P0DP57 97 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 MS4A1P11836 297 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 NDUFV2P19404 249 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 FGFR2P21802 821 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 NOL9Q5SY16 702 aaKnown RBP11.28□□□□□ -0.6
SRRM1-217ENST00000490543 WDR63Q8IWG1 891 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 SUGT1Q9Y2Z0 365 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 ZHX2Q9Y6X8 837 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 AK9Q5TCS8 1911 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 UTYO14607 1347 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 MAST3O60307 1309 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 DOCK3Q8IZD9 2030 aa11.28□□□□□ -0.6
SRRM1-217ENST00000490543 A0A1W2PPC1 479 aa11.27□□□□□ -0.61
SRRM1-217ENST00000490543 PHF20L1A8MW92 1017 aa11.27□□□□□ -0.61
SRRM1-217ENST00000490543 CD2BP2O95400 341 aaKnown RBP11.27□□□□□ -0.61
SRRM1-217ENST00000490543 DIS3LQ8TF46 1054 aaKnown RBP11.27□□□□□ -0.61
SRRM1-217ENST00000490543 PAWRQ96IZ0 340 aaKnown RBP11.27□□□□□ -0.61
SRRM1-217ENST00000490543 MGAMO43451 1857 aa11.27□□□□□ -0.61
SRRM1-217ENST00000490543 A0A0G2JLL6 359 aaPredicted RBP11.26□□□□□ -0.61
SRRM1-217ENST00000490543 PRDX5P30044 214 aa11.26□□□□□ -0.61
SRRM1-217ENST00000490543 GADL1Q6ZQY3 521 aa11.26□□□□□ -0.61
SRRM1-217ENST00000490543 PRRT2Q7Z6L0 340 aaPredicted RBP11.26□□□□□ -0.61
SRRM1-217ENST00000490543 RETREG3Q86VR2 466 aa11.26□□□□□ -0.61
SRRM1-217ENST00000490543 WDR66Q8TBY9 1149 aa11.26□□□□□ -0.61
SRRM1-217ENST00000490543 PAK6Q9NQU5 681 aaPredicted RBP11.26□□□□□ -0.61
SRRM1-217ENST00000490543 USP40Q9NVE5 1235 aa11.26□□□□□ -0.61
SRRM1-217ENST00000490543 PKD2L1Q9P0L9 805 aa11.26□□□□□ -0.61
SRRM1-217ENST00000490543 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.26□□□□□ -0.61
SRRM1-217ENST00000490543 AFG3L2Q9Y4W6 797 aa11.26□□□□□ -0.61
SRRM1-217ENST00000490543 TNPO2O14787 897 aaKnown RBP11.25□□□□□ -0.61
SRRM1-217ENST00000490543 ZBTB24O43167 697 aaPredicted RBP11.25□□□□□ -0.61
SRRM1-217ENST00000490543 IFIT1P09914 478 aaKnown RBP11.25□□□□□ -0.61
SRRM1-217ENST00000490543 PTPRAP18433 802 aa11.25□□□□□ -0.61
SRRM1-217ENST00000490543 PDE4DQ08499 809 aa11.25□□□□□ -0.61
SRRM1-217ENST00000490543 FOXC1Q12948 553 aa11.25□□□□□ -0.61
SRRM1-217ENST00000490543 PUM3Q15397 648 aaKnown RBP11.25□□□□□ -0.61
SRRM1-217ENST00000490543 Q7L0L9 218 aa11.25□□□□□ -0.61
SRRM1-217ENST00000490543 SH3BP5LQ7L8J4 393 aa11.25□□□□□ -0.61
SRRM1-217ENST00000490543 FASTKD5Q7L8L6 764 aaKnown RBP11.25□□□□□ -0.61
SRRM1-217ENST00000490543 CCDC84Q86UT8 332 aaPredicted RBP11.25□□□□□ -0.61
SRRM1-217ENST00000490543 GDF15Q99988 308 aa11.25□□□□□ -0.61
SRRM1-217ENST00000490543 ATRNL1Q5VV63 1379 aa11.25□□□□□ -0.61
SRRM1-217ENST00000490543 ALPK3Q96L96 1907 aa11.25□□□□□ -0.61
SRRM1-217ENST00000490543 JUNDP17535 347 aa11.24□□□□□ -0.61
SRRM1-217ENST00000490543 RGS3P49796 1198 aa11.24□□□□□ -0.61
SRRM1-217ENST00000490543 IRF5Q13568 498 aa11.24□□□□□ -0.61
SRRM1-217ENST00000490543 SCYL3Q8IZE3 742 aa11.24□□□□□ -0.61
SRRM1-217ENST00000490543 TBC1D2Q9BYX2 928 aa11.24□□□□□ -0.61
SRRM1-217ENST00000490543 ZMYND8Q9ULU4 1186 aaPredicted RBP11.24□□□□□ -0.61
SRRM1-217ENST00000490543 KIF16BQ96L93 1317 aa11.24□□□□□ -0.61
SRRM1-217ENST00000490543 EYA2O00167 538 aa11.23□□□□□ -0.61
SRRM1-217ENST00000490543 SLC5A1P13866 664 aa11.23□□□□□ -0.61
SRRM1-217ENST00000490543 ZEB1P37275 1124 aaPredicted RBP11.23□□□□□ -0.61
SRRM1-217ENST00000490543 RFX5P48382 616 aaPredicted RBP11.23□□□□□ -0.61
SRRM1-217ENST00000490543 MAP3K10Q02779 954 aa11.23□□□□□ -0.61
SRRM1-217ENST00000490543 ATG9AQ7Z3C6 839 aa11.23□□□□□ -0.61
SRRM1-217ENST00000490543 NECAB2Q7Z6G3 386 aa11.23□□□□□ -0.61
SRRM1-217ENST00000490543 C7orf61Q8IZ16 206 aa11.23□□□□□ -0.61
SRRM1-217ENST00000490543 DEFB123Q8N688 67 aa11.23□□□□□ -0.61
SRRM1-217ENST00000490543 ANKRD13CQ8N6S4 541 aa11.23□□□□□ -0.61
SRRM1-217ENST00000490543 SMCR8Q8TEV9 937 aaPredicted RBP11.23□□□□□ -0.61
SRRM1-217ENST00000490543 LPIN2Q92539 896 aa11.23□□□□□ -0.61
SRRM1-217ENST00000490543 USP44Q9H0E7 712 aa11.23□□□□□ -0.61
SRRM1-217ENST00000490543 PICK1Q9NRD5 415 aa11.23□□□□□ -0.61
SRRM1-217ENST00000490543 DDTLA6NHG4 134 aaPredicted RBP11.22□□□□□ -0.61
SRRM1-217ENST00000490543 TRIM75PA6NK02 468 aa11.22□□□□□ -0.61
SRRM1-217ENST00000490543 LDHBP07195 334 aaKnown RBP11.22□□□□□ -0.61
SRRM1-217ENST00000490543 SYN1P17600 705 aa11.22□□□□□ -0.61
SRRM1-217ENST00000490543 BMP8BP34820 402 aa11.22□□□□□ -0.61
SRRM1-217ENST00000490543 TRIM32Q13049 653 aa11.22□□□□□ -0.61
SRRM1-217ENST00000490543 TREML2Q5T2D2 321 aa11.22□□□□□ -0.61
SRRM1-217ENST00000490543 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
SRRM1-217ENST00000490543 SLC45A1Q9Y2W3 748 aa11.22□□□□□ -0.61
SRRM1-217ENST00000490543 ENTPD3O75355 529 aa11.21□□□□□ -0.61
SRRM1-217ENST00000490543 PKDCCQ504Y2 493 aa11.21□□□□□ -0.61
SRRM1-217ENST00000490543 ZSCAN29Q8IWY8 852 aaPredicted RBP11.21□□□□□ -0.61
SRRM1-217ENST00000490543 COA7Q96BR5 231 aa11.21□□□□□ -0.61
SRRM1-217ENST00000490543 IDI2Q9BXS1 227 aa11.21□□□□□ -0.61
SRRM1-217ENST00000490543 DDX4Q9NQI0 724 aaKnown RBP11.21□□□□□ -0.61
SRRM1-217ENST00000490543 LRRFIP2Q9Y608 721 aaKnown RBP11.21□□□□□ -0.61
SRRM1-217ENST00000490543 PTPRFP10586 1907 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms