RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 ACER1Q8TDN7 264 aa10.92□□□□□ -0.66
ECM1-205ENST00000490346 FEZ1Q99689 392 aa10.92□□□□□ -0.66
ECM1-205ENST00000490346 DSCC1Q9BVC3 393 aa10.92□□□□□ -0.66
ECM1-205ENST00000490346 CFHR5Q9BXR6 569 aa10.92□□□□□ -0.66
ECM1-205ENST00000490346 ZNF287Q9HBT7 754 aa10.92□□□□□ -0.66
ECM1-205ENST00000490346 INCENPQ9NQS7 918 aa10.92□□□□□ -0.66
ECM1-205ENST00000490346 C19orf81C9J6K1 198 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 SGSM2O43147 1006 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 ICA1Q05084 483 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 ZYXQ15942 572 aaKnown RBP10.91□□□□□ -0.66
ECM1-205ENST00000490346 SH3D19Q5HYK7 790 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 USP17L2Q6R6M4 530 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 PROCA1Q8NCQ7 364 aaPredicted RBP10.91□□□□□ -0.66
ECM1-205ENST00000490346 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.91□□□□□ -0.66
ECM1-205ENST00000490346 ZFYVE28Q9HCC9 887 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 ZCCHC17Q9NP64 241 aaKnown RBP10.91□□□□□ -0.66
ECM1-205ENST00000490346 PRDM10Q9NQV6 1147 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 TMOD4Q9NZQ9 345 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 ANAPC4Q9UJX5 808 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 AGTPBP1Q9UPW5 1226 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 TACC3Q9Y6A5 838 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 LAMA4Q16363 1823 aa10.91□□□□□ -0.66
ECM1-205ENST00000490346 CASP8AP2Q9UKL3 1982 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 GREB1LQ9C091 1923 aaPredicted RBP10.9□□□□□ -0.66
ECM1-205ENST00000490346 A0A1W2PRG0 241 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 GPR25O00155 361 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 CYP2C8P10632 490 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 ATP2B2Q01814 1243 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 PTH1RQ03431 593 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 FAM47AQ5JRC9 791 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 SIAH1Q8IUQ4 282 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 TBC1D10CQ8IV04 446 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 ESYT1Q9BSJ8 1104 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 NBPF3Q9H094 633 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 KIAA1683Q9H0B3 1180 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 KANSL2Q9H9L4 492 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 TOMM22Q9NS69 142 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
ECM1-205ENST00000490346 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.9□□□□□ -0.66
ECM1-205ENST00000490346 ZNF213O14771 459 aa10.89□□□□□ -0.67
ECM1-205ENST00000490346 RANBP6O60518 1105 aaKnown RBP10.89□□□□□ -0.67
ECM1-205ENST00000490346 CDC45O75419 566 aa10.89□□□□□ -0.67
ECM1-205ENST00000490346 TSPY3P0CV98 308 aa10.89□□□□□ -0.67
ECM1-205ENST00000490346 TSPY8P0CW00 308 aa10.89□□□□□ -0.67
ECM1-205ENST00000490346 EEF2P13639 858 aaKnown RBP10.89□□□□□ -0.67
ECM1-205ENST00000490346 USP14P54578 494 aa10.89□□□□□ -0.67
ECM1-205ENST00000490346 TFAP4Q01664 338 aa10.89□□□□□ -0.67
ECM1-205ENST00000490346 RRP12Q5JTH9 1297 aaKnown RBP10.89□□□□□ -0.67
ECM1-205ENST00000490346 ZNF296Q8WUU4 475 aaPredicted RBP10.89□□□□□ -0.67
ECM1-205ENST00000490346 CEP95Q96GE4 821 aa10.89□□□□□ -0.67
ECM1-205ENST00000490346 PARK7Q99497 189 aaKnown RBP10.89□□□□□ -0.67
ECM1-205ENST00000490346 ARHGEF10LQ9HCE6 1279 aa10.89□□□□□ -0.67
ECM1-205ENST00000490346 CTNNA3Q9UI47 895 aa10.89□□□□□ -0.67
ECM1-205ENST00000490346 SLC45A1Q9Y2W3 748 aa10.89□□□□□ -0.67
ECM1-205ENST00000490346 ADGRA2Q96PE1 1338 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 IGKV6D-41A0A0C4DH26 115 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 TSPY2A6NKD2 308 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 ORC4O43929 436 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 TLR2O60603 784 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 FKTNO75072 461 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 FGRP09769 529 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 VCAM1P19320 739 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 PABPC4Q13310 644 aaKnown RBP eCLIP10.88□□□□□ -0.67
ECM1-205ENST00000490346 IMMTQ16891 758 aaKnown RBP10.88□□□□□ -0.67
ECM1-205ENST00000490346 NOM1Q5C9Z4 860 aaKnown RBP10.88□□□□□ -0.67
ECM1-205ENST00000490346 AKNAD1Q5T1N1 836 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 COL13A1Q5TAT6 717 aaPredicted RBP10.88□□□□□ -0.67
ECM1-205ENST00000490346 MFSD6Q6ZSS7 791 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 KIAA1211Q6ZU35 1233 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 NEDD1Q8NHV4 660 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 STAG1Q8WVM7 1258 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 C12orf42Q96LP6 360 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 ASCC2Q9H1I8 757 aaPredicted RBP10.88□□□□□ -0.67
ECM1-205ENST00000490346 SH2D4AQ9H788 454 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 CPA4Q9UI42 421 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 TMX2Q9Y320 296 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 PLIN4Q96Q06 1357 aa10.88□□□□□ -0.67
ECM1-205ENST00000490346 NEDD4P46934 1319 aa10.87□□□□□ -0.67
ECM1-205ENST00000490346 OSBPP22059 807 aa10.87□□□□□ -0.67
ECM1-205ENST00000490346 HOXA7P31268 230 aaPredicted RBP10.87□□□□□ -0.67
ECM1-205ENST00000490346 IRX3P78415 501 aaPredicted RBP10.87□□□□□ -0.67
ECM1-205ENST00000490346 KIAA1755Q5JYT7 1200 aa10.87□□□□□ -0.67
ECM1-205ENST00000490346 CASC1Q6TDU7 716 aa10.87□□□□□ -0.67
ECM1-205ENST00000490346 SPICE1Q8N0Z3 855 aa10.87□□□□□ -0.67
ECM1-205ENST00000490346 NKX2-3Q8TAU0 364 aa10.87□□□□□ -0.67
ECM1-205ENST00000490346 SMCR8Q8TEV9 937 aaPredicted RBP10.87□□□□□ -0.67
ECM1-205ENST00000490346 RNF41Q9H4P4 317 aaPredicted RBP10.87□□□□□ -0.67
ECM1-205ENST00000490346 RPAP3Q9H6T3 665 aaPredicted RBP10.87□□□□□ -0.67
ECM1-205ENST00000490346 VCPKMTQ9H867 229 aa10.87□□□□□ -0.67
ECM1-205ENST00000490346 MTMR4Q9NYA4 1195 aa10.87□□□□□ -0.67
ECM1-205ENST00000490346 NYAP2Q9P242 653 aa10.87□□□□□ -0.67
ECM1-205ENST00000490346 PNMA3Q9UL41 463 aa10.87□□□□□ -0.67
ECM1-205ENST00000490346 RBM8AQ9Y5S9 174 aaKnown RBP10.87□□□□□ -0.67
ECM1-205ENST00000490346 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
ECM1-205ENST00000490346 MYH4Q9Y623 1939 aa10.86□□□□□ -0.67
ECM1-205ENST00000490346 USP17L15C9J2P7 530 aa10.86□□□□□ -0.67
ECM1-205ENST00000490346 USP17L13C9JLJ4 530 aa10.86□□□□□ -0.67
ECM1-205ENST00000490346 USP17L11C9JVI0 530 aa10.86□□□□□ -0.67
ECM1-205ENST00000490346 USP17L18D6R9N7 530 aa10.86□□□□□ -0.67
ECM1-205ENST00000490346 USP17L22D6RA61 530 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms