RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 BRI3BPQ8WY22 251 aa20.67■□□□□ 0.9
ERCC3-207ENST00000490062 C12orf42Q96LP6 360 aa20.67■□□□□ 0.9
ERCC3-207ENST00000490062 CFHR5Q9BXR6 569 aa20.67■□□□□ 0.9
ERCC3-207ENST00000490062 KIAA1683Q9H0B3 1180 aa20.67■□□□□ 0.9
ERCC3-207ENST00000490062 TCP11L1Q9NUJ3 509 aa20.67■□□□□ 0.9
ERCC3-207ENST00000490062 WBP1LQ9NX94 342 aa20.67■□□□□ 0.9
ERCC3-207ENST00000490062 USP17L10C9JJH3 530 aa20.66■□□□□ 0.9
ERCC3-207ENST00000490062 EIF5BO60841 1220 aaKnown RBP20.66■□□□□ 0.9
ERCC3-207ENST00000490062 PRDM1O75626 825 aa20.66■□□□□ 0.9
ERCC3-207ENST00000490062 PPP4R3BQ5MIZ7 849 aa20.66■□□□□ 0.9
ERCC3-207ENST00000490062 FASTKD5Q7L8L6 764 aaKnown RBP20.66■□□□□ 0.9
ERCC3-207ENST00000490062 CCDC84Q86UT8 332 aaPredicted RBP20.66■□□□□ 0.9
ERCC3-207ENST00000490062 SIAH1Q8IUQ4 282 aa20.66■□□□□ 0.9
ERCC3-207ENST00000490062 CNNM2Q9H8M5 875 aa20.66■□□□□ 0.9
ERCC3-207ENST00000490062 NYAP2Q9P242 653 aa20.66■□□□□ 0.9
ERCC3-207ENST00000490062 SLC45A1Q9Y2W3 748 aa20.66■□□□□ 0.9
ERCC3-207ENST00000490062 CCL15-CCL14A0A0B4J2E2 113 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 MPHOSPH10O00566 681 aaKnown RBP20.65■□□□□ 0.9
ERCC3-207ENST00000490062 CA12O43570 354 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 ALDH1A1P00352 501 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 ICA1Q05084 483 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 MKRN3Q13064 507 aaKnown RBP20.65■□□□□ 0.9
ERCC3-207ENST00000490062 RAB3GAP1Q15042 981 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 CCL15Q16663 113 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 TSGA10IPQ3SY00 556 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 IFNL1Q8IU54 200 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 KCNB2Q92953 911 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 MKL1Q969V6 931 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 PTPN18Q99952 460 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 SAGE1Q9NXZ1 904 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 TMX2Q9Y320 296 aa20.65■□□□□ 0.9
ERCC3-207ENST00000490062 NEDD4P46934 1319 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 TRIM75PA6NK02 468 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 TSPY3P0CV98 308 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 TSPY8P0CW00 308 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 USP14P54578 494 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 TFAP4Q01664 338 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 ANKRD23Q86SG2 305 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 STK11IPQ8N1F8 1099 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 ESR2Q92731 530 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 KRT23Q9C075 422 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 SH2D4AQ9H788 454 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 INCENPQ9NQS7 918 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 MTMR4Q9NYA4 1195 aa20.64■□□□□ 0.89
ERCC3-207ENST00000490062 A0A1W2PRG0 241 aa20.63■□□□□ 0.89
ERCC3-207ENST00000490062 TSPY2A6NKD2 308 aa20.63■□□□□ 0.89
ERCC3-207ENST00000490062 IGF2BP3O00425 579 aaKnown RBP eCLIP20.63■□□□□ 0.89
ERCC3-207ENST00000490062 OTUD7BQ6GQQ9 843 aa20.63■□□□□ 0.89
ERCC3-207ENST00000490062 ARHGEF10LQ9HCE6 1279 aa20.63■□□□□ 0.89
ERCC3-207ENST00000490062 BTBD19C9JJ37 291 aa20.62■□□□□ 0.89
ERCC3-207ENST00000490062 SLC27A2O14975 620 aa20.62■□□□□ 0.89
ERCC3-207ENST00000490062 MTMR2Q13614 643 aa20.62■□□□□ 0.89
ERCC3-207ENST00000490062 RNF20Q5VTR2 975 aa20.62■□□□□ 0.89
ERCC3-207ENST00000490062 CREB3L3Q68CJ9 461 aa20.62■□□□□ 0.89
ERCC3-207ENST00000490062 GPAT2Q6NUI2 795 aa20.62■□□□□ 0.89
ERCC3-207ENST00000490062 USP17L2Q6R6M4 530 aa20.62■□□□□ 0.89
ERCC3-207ENST00000490062 ACER1Q8TDN7 264 aa20.62■□□□□ 0.89
ERCC3-207ENST00000490062 CEP95Q96GE4 821 aa20.62■□□□□ 0.89
ERCC3-207ENST00000490062 IL17RBQ9NRM6 502 aa20.62■□□□□ 0.89
ERCC3-207ENST00000490062 AGTPBP1Q9UPW5 1226 aa20.62■□□□□ 0.89
ERCC3-207ENST00000490062 RANBP6O60518 1105 aaKnown RBP20.61■□□□□ 0.89
ERCC3-207ENST00000490062 TTLL1O95922 423 aa20.61■□□□□ 0.89
ERCC3-207ENST00000490062 EEF2P13639 858 aaKnown RBP20.61■□□□□ 0.89
ERCC3-207ENST00000490062 HSPA4P34932 840 aa20.61■□□□□ 0.89
ERCC3-207ENST00000490062 CCDC178Q5BJE1 867 aa20.61■□□□□ 0.89
ERCC3-207ENST00000490062 FAM47AQ5JRC9 791 aa20.61■□□□□ 0.89
ERCC3-207ENST00000490062 LPAR1Q92633 364 aa20.61■□□□□ 0.89
ERCC3-207ENST00000490062 TTC14Q96N46 770 aa20.61■□□□□ 0.89
ERCC3-207ENST00000490062 MTA3Q9BTC8 594 aa20.61■□□□□ 0.89
ERCC3-207ENST00000490062 EMILIN3Q9NT22 766 aa20.61■□□□□ 0.89
ERCC3-207ENST00000490062 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.61■□□□□ 0.89
ERCC3-207ENST00000490062 E7EWF7 191 aa20.6■□□□□ 0.89
ERCC3-207ENST00000490062 HOXA7P31268 230 aaPredicted RBP20.6■□□□□ 0.89
ERCC3-207ENST00000490062 HMGCS2P54868 508 aa20.6■□□□□ 0.89
ERCC3-207ENST00000490062 NOM1Q5C9Z4 860 aaKnown RBP20.6■□□□□ 0.89
ERCC3-207ENST00000490062 STOX1Q6ZVD7 989 aa20.6■□□□□ 0.89
ERCC3-207ENST00000490062 FAM43AQ8N2R8 423 aa20.6■□□□□ 0.89
ERCC3-207ENST00000490062 ANKS1AQ92625 1134 aa20.6■□□□□ 0.89
ERCC3-207ENST00000490062 VCPKMTQ9H867 229 aa20.6■□□□□ 0.89
ERCC3-207ENST00000490062 TAF6LQ9Y6J9 622 aa20.6■□□□□ 0.89
ERCC3-207ENST00000490062 TRDNQ13061 729 aa20.59■□□□□ 0.89
ERCC3-207ENST00000490062 CLEC10AQ8IUN9 316 aa20.59■□□□□ 0.89
ERCC3-207ENST00000490062 NCOA7Q8NI08 942 aa20.59■□□□□ 0.89
ERCC3-207ENST00000490062 NKX2-3Q8TAU0 364 aa20.59■□□□□ 0.89
ERCC3-207ENST00000490062 FEZ1Q99689 392 aa20.59■□□□□ 0.89
ERCC3-207ENST00000490062 USP26Q9BXU7 913 aa20.59■□□□□ 0.89
ERCC3-207ENST00000490062 TOMM22Q9NS69 142 aa20.59■□□□□ 0.89
ERCC3-207ENST00000490062 RNF186Q9NXI6 227 aa20.59■□□□□ 0.89
ERCC3-207ENST00000490062 TMOD4Q9NZQ9 345 aa20.59■□□□□ 0.89
ERCC3-207ENST00000490062 ZSWIM5Q9P217 1185 aa20.59■□□□□ 0.89
ERCC3-207ENST00000490062 MYH4Q9Y623 1939 aa20.59■□□□□ 0.89
ERCC3-207ENST00000490062 PCNTO95613 3336 aa20.58■□□□□ 0.89
ERCC3-207ENST00000490062 B4E1Z4 1266 aa20.58■□□□□ 0.89
ERCC3-207ENST00000490062 KDM4AO75164 1064 aa20.58■□□□□ 0.89
ERCC3-207ENST00000490062 PABPC4Q13310 644 aaKnown RBP eCLIP20.58■□□□□ 0.89
ERCC3-207ENST00000490062 C8orf34Q49A92 452 aa20.58■□□□□ 0.89
ERCC3-207ENST00000490062 RRP12Q5JTH9 1297 aaKnown RBP20.58■□□□□ 0.89
ERCC3-207ENST00000490062 IQCA1Q86XH1 822 aa20.58■□□□□ 0.89
ERCC3-207ENST00000490062 DGKHQ86XP1 1220 aa20.58■□□□□ 0.89
ERCC3-207ENST00000490062 GMCL1P1Q8NEA9 526 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 209.3 ms