RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 TSHZ3Q63HK5 1081 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 CSRNP1Q96S65 589 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 IBSPP21815 317 aaPredicted RBP9.8□□□□□ -0.84
LSAMP-205ENST00000490035 HOXC9P31274 260 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 CNBD1Q8NA66 436 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 MCUR1Q96AQ8 359 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 DAPK3O43293 454 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 CARD10Q9BWT7 1032 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 IFT122Q9HBG6 1241 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 GGA1Q9UJY5 639 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 MBD4O95243 580 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 Q9H521 79 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 SBNO2Q9Y2G9 1366 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 ERVV-2B6SEH9 535 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 GPAA1O43292 621 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 GEN1Q17RS7 908 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 NSFL1CQ9UNZ2 370 aaKnown RBP9.79□□□□□ -0.84
LSAMP-205ENST00000490035 H7C1D1 291 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 TNFAIP1Q13829 316 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 ATP8A2Q9NTI2 1148 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 TRPC6Q9Y210 931 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 ATP8B1O43520 1251 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 EVI5O60447 810 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 RNF40O75150 1001 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 RHOXF2BP0C7M4 288 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 REXO1Q8N1G1 1221 aaKnown RBP9.79□□□□□ -0.84
LSAMP-205ENST00000490035 ZNF713Q8N859 430 aaPredicted RBP9.79□□□□□ -0.84
LSAMP-205ENST00000490035 PPP4R1Q8TF05 950 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 RHOXF2Q9BQY4 288 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 SH3BP5O60239 455 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 ATP5JP18859 108 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 FLAD1Q8NFF5 587 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 AMFRQ9UKV5 643 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 GOLGA8KD6RF30 607 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 ZBED4O75132 1171 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 C10orf76Q5T2E6 689 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 CCDC89Q8N998 374 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 TRIM6Q9C030 488 aaPredicted RBP9.79□□□□□ -0.84
LSAMP-205ENST00000490035 CHL1O00533 1208 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 NOP56O00567 594 aaKnown RBP9.79□□□□□ -0.84
LSAMP-205ENST00000490035 GKAP1Q5VSY0 366 aaPredicted RBP9.79□□□□□ -0.84
LSAMP-205ENST00000490035 PAXIP1Q6ZW49 1069 aaPredicted RBP9.79□□□□□ -0.84
LSAMP-205ENST00000490035 RNF10Q8N5U6 811 aaKnown RBP9.79□□□□□ -0.84
LSAMP-205ENST00000490035 TESK2Q96S53 571 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 RBSNQ9H1K0 784 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 RABGAP1Q9Y3P9 1069 aa9.79□□□□□ -0.84
LSAMP-205ENST00000490035 ZNF608Q9ULD9 1512 aaPredicted RBP9.79□□□□□ -0.84
LSAMP-205ENST00000490035 TROVE2P10155 538 aaKnown RBP eCLIP9.78□□□□□ -0.84
LSAMP-205ENST00000490035 PEX26Q7Z412 305 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 CHURC1Q8WUH1 139 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 SPZ1Q9BXG8 430 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 AZI2Q9H6S1 392 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 SAR1BQ9Y6B6 198 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 HSPA8P11142 646 aaKnown RBP9.78□□□□□ -0.84
LSAMP-205ENST00000490035 ITGA6P23229 1130 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 STAT1P42224 750 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 CUL4BQ13620 913 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 DCUN1D2Q6PH85 259 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 GPHNQ9NQX3 736 aaPredicted RBP9.78□□□□□ -0.84
LSAMP-205ENST00000490035 CROCC2H7BZ55 1655 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 TLDC2A0PJX2 215 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 XRCC5P13010 732 aaKnown RBP9.78□□□□□ -0.84
LSAMP-205ENST00000490035 TCP1P17987 556 aaKnown RBP9.78□□□□□ -0.84
LSAMP-205ENST00000490035 CDC25BP30305 580 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 KARSQ15046 597 aaKnown RBP9.78□□□□□ -0.84
LSAMP-205ENST00000490035 AOC3Q16853 763 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 GNPTABQ3T906 1256 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 FAM212AQ96EL1 285 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 AS3MTQ9HBK9 375 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 M0QZ92 97 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 PCK1P35558 622 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 HHATQ5VTY9 493 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 C16orf71Q8IYS4 520 aaPredicted RBP9.78□□□□□ -0.84
LSAMP-205ENST00000490035 RETREG2Q8NC44 543 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 GSDMBQ8TAX9 411 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 TRIM11Q96F44 468 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 NEO1Q92859 1461 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 MYCNP04198 464 aaPredicted RBP9.78□□□□□ -0.84
LSAMP-205ENST00000490035 RNASELQ05823 741 aaKnown RBP9.78□□□□□ -0.84
LSAMP-205ENST00000490035 NLRX1Q86UT6 975 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 RPUSD2Q8IZ73 545 aaKnown RBP9.78□□□□□ -0.84
LSAMP-205ENST00000490035 AK8Q96MA6 479 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 MRPL44Q9H9J2 332 aaKnown RBP9.78□□□□□ -0.84
LSAMP-205ENST00000490035 ARMC9Q7Z3E5 817 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 OR8K1Q8NGG5 319 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 EPSTI1Q96J88 318 aa9.78□□□□□ -0.84
LSAMP-205ENST00000490035 KRT9P35527 623 aa9.77□□□□□ -0.84
LSAMP-205ENST00000490035 SLC1A4P43007 532 aa9.77□□□□□ -0.84
LSAMP-205ENST00000490035 TRAPPC10P48553 1259 aa9.77□□□□□ -0.84
LSAMP-205ENST00000490035 ARHGAP4P98171 946 aa9.77□□□□□ -0.84
LSAMP-205ENST00000490035 KLHL30Q0D2K2 578 aa9.77□□□□□ -0.84
LSAMP-205ENST00000490035 MIPOL1Q8TD10 442 aa9.77□□□□□ -0.84
LSAMP-205ENST00000490035 IPO11Q9UI26 975 aaKnown RBP9.77□□□□□ -0.84
LSAMP-205ENST00000490035 GTF3C6Q969F1 213 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 SLC52A2Q9HAB3 445 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 VEZTQ9HBM0 779 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 PA2G4Q9UQ80 394 aaKnown RBP9.77□□□□□ -0.85
LSAMP-205ENST00000490035 POLR2BP30876 1174 aaKnown RBP9.77□□□□□ -0.85
LSAMP-205ENST00000490035 STX17P56962 302 aa9.77□□□□□ -0.85
LSAMP-205ENST00000490035 ANKRD20A3Q5VUR7 823 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms