RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 IDI2Q9BXS1 227 aa9.21□□□□□ -0.94
COL9A1-209ENST00000489861 DDX4Q9NQI0 724 aaKnown RBP9.21□□□□□ -0.94
COL9A1-209ENST00000489861 PHF24Q9UPV7 400 aa9.21□□□□□ -0.94
COL9A1-209ENST00000489861 GVINP1Q7Z2Y8 2422 aa9.21□□□□□ -0.94
COL9A1-209ENST00000489861 NCOR2Q9Y618 2525 aa9.21□□□□□ -0.94
COL9A1-209ENST00000489861 EPOPA6NHQ4 379 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 SLC15A5A6NIM6 579 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 CNMDO75829 334 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 CSF2RAP15509 400 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 PTPREP23469 700 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 PRDX5P30044 214 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 RABGGTBP53611 331 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 MTMR2Q13614 643 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 WDR43Q15061 677 aaKnown RBP eCLIP9.2□□□□□ -0.94
COL9A1-209ENST00000489861 FAM47AQ5JRC9 791 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 MFSD5Q6N075 450 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 GJD3Q8N144 294 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 TSPYL6Q8N831 410 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 TBX21Q9UL17 535 aa9.2□□□□□ -0.94
COL9A1-209ENST00000489861 MYO15AQ9UKN7 3530 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 CDK5RAP2Q96SN8 1893 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 SEPT4O43236 478 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 KRT37O76014 449 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 ZEB1P37275 1124 aaPredicted RBP9.19□□□□□ -0.94
COL9A1-209ENST00000489861 CALD1Q05682 793 aaKnown RBP9.19□□□□□ -0.94
COL9A1-209ENST00000489861 PPIGQ13427 754 aaKnown RBP eCLIP9.19□□□□□ -0.94
COL9A1-209ENST00000489861 GRB14Q14449 540 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 CSPP1Q1MSJ5 1256 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 CAVIN4Q5BKX8 364 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 PRAMEF19Q5SWL8 479 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 PPP2R2DQ66LE6 453 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 ANKRD33Q7Z3H0 272 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 FAM178BQ8IXR5 827 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 HLA-CQ95604 372 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 OSBPL5Q9H0X9 879 aaPredicted RBP9.19□□□□□ -0.94
COL9A1-209ENST00000489861 MYH16Q9H6N6 1097 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 SIPA1L1O43166 1804 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 ATRXP46100 2492 aa9.19□□□□□ -0.94
COL9A1-209ENST00000489861 WDR87Q6ZQQ6 2873 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 A0A1W2PQ45 241 aaPredicted RBP9.18□□□□□ -0.94
COL9A1-209ENST00000489861 A0A1W2PQY0 241 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 USP17L5A8MUK1 530 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 ACACBO00763 2458 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 TBC1D12O60347 775 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 CACNA1FO60840 1977 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 CAP2P40123 477 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 BACE1P56817 501 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 JAG1P78504 1218 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 WDR78Q5VTH9 848 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 HFE2Q6ZVN8 426 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 VGLL2Q8N8G2 317 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 PRSS33Q8NF86 280 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 LINS1Q8NG48 757 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 CHD6Q8TD26 2715 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 TOX2Q96NM4 488 aa9.18□□□□□ -0.94
COL9A1-209ENST00000489861 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.18□□□□□ -0.94
COL9A1-209ENST00000489861 CWC22Q9HCG8 908 aaKnown RBP9.18□□□□□ -0.94
COL9A1-209ENST00000489861 ZNF236Q9UL36 1845 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 ZNF521Q96K83 1311 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 POTEB3A0JP26 581 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 DCDC2CA8MYV0 355 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 ALADP13716 330 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 PICALMQ13492 652 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 LRRC24Q50LG9 513 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 PSRC1Q6PGN9 363 aaPredicted RBP9.17□□□□□ -0.94
COL9A1-209ENST00000489861 POTEBQ6S5H4 581 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 WDR66Q8TBY9 1149 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 DNAAF4Q8WXU2 420 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 WDR18Q9BV38 432 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 TBC1D2Q9BYX2 928 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 CERS4Q9HA82 394 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 PLXNA3P51805 1871 aa9.17□□□□□ -0.94
COL9A1-209ENST00000489861 MROH5Q6ZUA9 1318 aa9.16□□□□□ -0.94
COL9A1-209ENST00000489861 GTPBP6O43824 516 aaPredicted RBP9.16□□□□□ -0.94
COL9A1-209ENST00000489861 GLRX3O76003 335 aaKnown RBP9.16□□□□□ -0.94
COL9A1-209ENST00000489861 PGK1P00558 417 aa9.16□□□□□ -0.94
COL9A1-209ENST00000489861 SLC5A1P13866 664 aa9.16□□□□□ -0.94
COL9A1-209ENST00000489861 SHROOM1Q2M3G4 852 aaPredicted RBP9.16□□□□□ -0.94
COL9A1-209ENST00000489861 OLFML2BQ68BL8 750 aa9.16□□□□□ -0.94
COL9A1-209ENST00000489861 CCDC174Q6PII3 467 aa9.16□□□□□ -0.94
COL9A1-209ENST00000489861 TMOD4Q9NZQ9 345 aa9.16□□□□□ -0.94
COL9A1-209ENST00000489861 COL4A4P53420 1690 aaPredicted RBP9.16□□□□□ -0.94
COL9A1-209ENST00000489861 DMDP11532 3685 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 MYO7AQ13402 2215 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 GAKO14976 1311 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 GFRA3O60609 400 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 PDE8BO95263 885 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 LDHBP07195 334 aaKnown RBP9.15□□□□□ -0.94
COL9A1-209ENST00000489861 SSTR3P32745 418 aaPredicted RBP9.15□□□□□ -0.94
COL9A1-209ENST00000489861 IER5LQ5T953 404 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 OTOP2Q7RTS6 562 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 GTF3C2Q8WUA4 911 aaPredicted RBP9.15□□□□□ -0.94
COL9A1-209ENST00000489861 RUNDC1Q96C34 613 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 PPP1R12CQ9BZL4 782 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 XPNPEP3Q9NQH7 507 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 EMILIN3Q9NT22 766 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 IFT57Q9NWB7 429 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 BTBD7Q9P203 1132 aa9.15□□□□□ -0.94
COL9A1-209ENST00000489861 RABGAP1Q9Y3P9 1069 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms