RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 USP17L18D6R9N7 530 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 USP17L22D6RA61 530 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 USP17L17D6RBQ6 530 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 USP17L19D6RCP7 530 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 USP17L20D6RJB6 530 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 GPAA1O43292 621 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 MYCP01106 439 aaPredicted RBP21.37■■□□□ 1.01
ABCF3-217ENST00000489719 GRK4P32298 578 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 PRKCZQ05513 592 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 USP17L24Q0WX57 530 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 B4GALNT3Q6L9W6 998 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 C12orf42Q96LP6 360 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 ARPP21Q9UBL0 812 aaPredicted RBP21.37■■□□□ 1.01
ABCF3-217ENST00000489719 STAP2Q9UGK3 403 aa21.37■■□□□ 1.01
ABCF3-217ENST00000489719 MINDY4BA8MYZ0 360 aa21.36■■□□□ 1.01
ABCF3-217ENST00000489719 PATL2C9JE40 543 aaKnown RBP21.36■■□□□ 1.01
ABCF3-217ENST00000489719 PDE1AP54750 535 aa21.36■■□□□ 1.01
ABCF3-217ENST00000489719 HERVK_113P62684 666 aa21.36■■□□□ 1.01
ABCF3-217ENST00000489719 SBK1Q52WX2 424 aa21.36■■□□□ 1.01
ABCF3-217ENST00000489719 C16orf86Q6ZW13 317 aa21.36■■□□□ 1.01
ABCF3-217ENST00000489719 GPRC5AQ8NFJ5 357 aa21.36■■□□□ 1.01
ABCF3-217ENST00000489719 GTF3C2Q8WUA4 911 aaPredicted RBP21.36■■□□□ 1.01
ABCF3-217ENST00000489719 LNPKQ9C0E8 428 aa21.36■■□□□ 1.01
ABCF3-217ENST00000489719 GABRQQ9UN88 632 aa21.36■■□□□ 1.01
ABCF3-217ENST00000489719 SIPA1L1O43166 1804 aa21.35■■□□□ 1.01
ABCF3-217ENST00000489719 FOCADQ5VW36 1801 aa21.35■■□□□ 1.01
ABCF3-217ENST00000489719 POTEFA5A3E0 1075 aa21.35■■□□□ 1.01
ABCF3-217ENST00000489719 AKR1B1P15121 316 aa21.35■■□□□ 1.01
ABCF3-217ENST00000489719 FLT3LGP49771 235 aa21.35■■□□□ 1.01
ABCF3-217ENST00000489719 CCAR1Q8IX12 1150 aaKnown RBP21.35■■□□□ 1.01
ABCF3-217ENST00000489719 SMC5Q8IY18 1101 aa21.35■■□□□ 1.01
ABCF3-217ENST00000489719 EVI5LQ96CN4 794 aa21.35■■□□□ 1.01
ABCF3-217ENST00000489719 NACAP1Q9BZK3 213 aa21.35■■□□□ 1.01
ABCF3-217ENST00000489719 MORF4L1Q9UBU8 362 aa21.35■■□□□ 1.01
ABCF3-217ENST00000489719 MYH1P12882 1939 aa21.35■■□□□ 1.01
ABCF3-217ENST00000489719 PHIPQ8WWQ0 1821 aa21.34■■□□□ 1.01
ABCF3-217ENST00000489719 SALL3Q9BXA9 1300 aa21.34■■□□□ 1.01
ABCF3-217ENST00000489719 SMIM22K7EJ46 135 aa21.34■■□□□ 1.01
ABCF3-217ENST00000489719 M0R2C6 588 aa21.34■■□□□ 1.01
ABCF3-217ENST00000489719 IGHDP01880 384 aa21.34■■□□□ 1.01
ABCF3-217ENST00000489719 TDO2P48775 406 aa21.34■■□□□ 1.01
ABCF3-217ENST00000489719 CATSPERGQ6ZRH7 1159 aa21.34■■□□□ 1.01
ABCF3-217ENST00000489719 MKNK2Q9HBH9 465 aa21.34■■□□□ 1.01
ABCF3-217ENST00000489719 ARHGEF10LQ9HCE6 1279 aa21.34■■□□□ 1.01
ABCF3-217ENST00000489719 CDK5RAP2Q96SN8 1893 aa21.34■■□□□ 1.01
ABCF3-217ENST00000489719 ADCY3O60266 1144 aa21.33■■□□□ 1.01
ABCF3-217ENST00000489719 UBXN2AP68543 259 aa21.33■■□□□ 1.01
ABCF3-217ENST00000489719 ZMYM1Q5SVZ6 1142 aa21.33■■□□□ 1.01
ABCF3-217ENST00000489719 SLAIN1Q8ND83 568 aa21.33■■□□□ 1.01
ABCF3-217ENST00000489719 SEC62Q99442 399 aaKnown RBP21.33■■□□□ 1.01
ABCF3-217ENST00000489719 SH2D4AQ9H788 454 aa21.33■■□□□ 1.01
ABCF3-217ENST00000489719 RBPJLQ9UBG7 517 aa21.33■■□□□ 1.01
ABCF3-217ENST00000489719 A0A1W2PRG0 241 aa21.32■■□□□ 1
ABCF3-217ENST00000489719 VCAM1P19320 739 aa21.32■■□□□ 1
ABCF3-217ENST00000489719 EN2P19622 333 aaPredicted RBP21.32■■□□□ 1
ABCF3-217ENST00000489719 ICA1Q05084 483 aa21.32■■□□□ 1
ABCF3-217ENST00000489719 CHD1LQ86WJ1 897 aa21.32■■□□□ 1
ABCF3-217ENST00000489719 IFNL3Q8IZI9 196 aa21.32■■□□□ 1
ABCF3-217ENST00000489719 STK11IPQ8N1F8 1099 aa21.32■■□□□ 1
ABCF3-217ENST00000489719 PAGR1Q9BTK6 254 aa21.32■■□□□ 1
ABCF3-217ENST00000489719 RPAP3Q9H6T3 665 aaPredicted RBP21.32■■□□□ 1
ABCF3-217ENST00000489719 KANSL2Q9H9L4 492 aa21.32■■□□□ 1
ABCF3-217ENST00000489719 ZNF287Q9HBT7 754 aa21.32■■□□□ 1
ABCF3-217ENST00000489719 ATP2B2Q01814 1243 aa21.31■■□□□ 1
ABCF3-217ENST00000489719 IRF5Q13568 498 aa21.31■■□□□ 1
ABCF3-217ENST00000489719 PXYLP1Q8TE99 480 aa21.31■■□□□ 1
ABCF3-217ENST00000489719 TXNRD2Q9NNW7 524 aa21.31■■□□□ 1
ABCF3-217ENST00000489719 RABGAP1Q9Y3P9 1069 aa21.31■■□□□ 1
ABCF3-217ENST00000489719 ERVK-9P63128 1117 aa21.3■■□□□ 1
ABCF3-217ENST00000489719 ERVK-24P63145 666 aa21.3■■□□□ 1
ABCF3-217ENST00000489719 Q3C1V9 767 aa21.3■■□□□ 1
ABCF3-217ENST00000489719 ZNF444Q8N0Y2 327 aaPredicted RBP21.3■■□□□ 1
ABCF3-217ENST00000489719 CWC22Q9HCG8 908 aaKnown RBP21.3■■□□□ 1
ABCF3-217ENST00000489719 HOXC10Q9NYD6 342 aa21.3■■□□□ 1
ABCF3-217ENST00000489719 TMX2Q9Y320 296 aa21.3■■□□□ 1
ABCF3-217ENST00000489719 TRIM6-TRIM34B2RNG4 842 aa21.29■■□□□ 1
ABCF3-217ENST00000489719 PEX10O60683 326 aa21.29■■□□□ 1
ABCF3-217ENST00000489719 SLC3A2P08195 630 aaKnown RBP21.29■■□□□ 1
ABCF3-217ENST00000489719 MAPK4P31152 587 aa21.29■■□□□ 1
ABCF3-217ENST00000489719 CCNA1P78396 465 aa21.29■■□□□ 1
ABCF3-217ENST00000489719 NUCB1Q02818 461 aa21.29■■□□□ 1
ABCF3-217ENST00000489719 COG2Q14746 738 aa21.29■■□□□ 1
ABCF3-217ENST00000489719 MTFR1Q15390 333 aa21.29■■□□□ 1
ABCF3-217ENST00000489719 SIAH1Q8IUQ4 282 aa21.29■■□□□ 1
ABCF3-217ENST00000489719 LPAR1Q92633 364 aa21.29■■□□□ 1
ABCF3-217ENST00000489719 NAPBQ9H115 298 aa21.29■■□□□ 1
ABCF3-217ENST00000489719 ATAD5Q96QE3 1844 aa21.29■■□□□ 1
ABCF3-217ENST00000489719 EEF2P13639 858 aaKnown RBP21.28■■□□□ 1
ABCF3-217ENST00000489719 ELNP15502 786 aa21.28■■□□□ 1
ABCF3-217ENST00000489719 TICAM2Q86XR7 235 aa21.28■■□□□ 1
ABCF3-217ENST00000489719 RILPL2Q969X0 211 aa21.28■■□□□ 1
ABCF3-217ENST00000489719 TANGO6Q9C0B7 1094 aa21.28■■□□□ 1
ABCF3-217ENST00000489719 RNF208Q9H0X6 261 aa21.28■■□□□ 1
ABCF3-217ENST00000489719 EPB41L4AQ9HCS5 686 aaPredicted RBP21.28■■□□□ 1
ABCF3-217ENST00000489719 GJD2Q9UKL4 321 aa21.28■■□□□ 1
ABCF3-217ENST00000489719 PTPRFP10586 1907 aa21.27■■□□□ 1
ABCF3-217ENST00000489719 CCL5P13501 91 aa21.27■■□□□ 1
ABCF3-217ENST00000489719 CLEC10AQ8IUN9 316 aa21.27■■□□□ 1
ABCF3-217ENST00000489719 NKX2-3Q8TAU0 364 aa21.27■■□□□ 1
ABCF3-217ENST00000489719 NUDT12Q9BQG2 462 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms