RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 USP17L20D6RJB6 530 aa27.24■■□□□ 1.95
HOXA9-205ENST00000489695 DYNLL1P63167 89 aaKnown RBP27.24■■□□□ 1.95
HOXA9-205ENST00000489695 CCNA1P78396 465 aa27.24■■□□□ 1.95
HOXA9-205ENST00000489695 MDM2Q00987 491 aaPredicted RBP27.24■■□□□ 1.95
HOXA9-205ENST00000489695 USP17L24Q0WX57 530 aa27.24■■□□□ 1.95
HOXA9-205ENST00000489695 GLRX3O76003 335 aaKnown RBP27.23■■□□□ 1.95
HOXA9-205ENST00000489695 LBX2Q6XYB7 198 aa27.23■■□□□ 1.95
HOXA9-205ENST00000489695 CATSPERGQ6ZRH7 1159 aa27.23■■□□□ 1.95
HOXA9-205ENST00000489695 SSH3Q8TE77 659 aa27.23■■□□□ 1.95
HOXA9-205ENST00000489695 FLRT1Q9NZU1 646 aa27.23■■□□□ 1.95
HOXA9-205ENST00000489695 SLC15A5A6NIM6 579 aa27.22■■□□□ 1.95
HOXA9-205ENST00000489695 POTEB2H3BUK9 544 aa27.22■■□□□ 1.95
HOXA9-205ENST00000489695 HOXC6P09630 235 aa27.22■■□□□ 1.95
HOXA9-205ENST00000489695 CYP7A1P22680 504 aa27.22■■□□□ 1.95
HOXA9-205ENST00000489695 MFSD14CQ5VZR4 134 aa27.22■■□□□ 1.95
HOXA9-205ENST00000489695 FAM109BQ6ICB4 259 aaPredicted RBP27.22■■□□□ 1.95
HOXA9-205ENST00000489695 CERS3Q8IU89 383 aa27.22■■□□□ 1.95
HOXA9-205ENST00000489695 KIAA1683Q9H0B3 1180 aa27.22■■□□□ 1.95
HOXA9-205ENST00000489695 EHD4Q9H223 541 aa27.22■■□□□ 1.95
HOXA9-205ENST00000489695 CWC22Q9HCG8 908 aaKnown RBP27.22■■□□□ 1.95
HOXA9-205ENST00000489695 PTPREP23469 700 aa27.21■■□□□ 1.95
HOXA9-205ENST00000489695 USP14P54578 494 aa27.21■■□□□ 1.95
HOXA9-205ENST00000489695 SENP6Q9GZR1 1112 aaPredicted RBP27.21■■□□□ 1.95
HOXA9-205ENST00000489695 SERPINB13Q9UIV8 391 aa27.21■■□□□ 1.95
HOXA9-205ENST00000489695 BCAR3O75815 825 aa27.2■■□□□ 1.94
HOXA9-205ENST00000489695 ZYXQ15942 572 aaKnown RBP27.2■■□□□ 1.94
HOXA9-205ENST00000489695 FRAT1Q92837 279 aaPredicted RBP27.2■■□□□ 1.94
HOXA9-205ENST00000489695 CLUAP1Q96AJ1 413 aa27.2■■□□□ 1.94
HOXA9-205ENST00000489695 FEZ1Q99689 392 aa27.2■■□□□ 1.94
HOXA9-205ENST00000489695 DDX20Q9UHI6 824 aaKnown RBP27.2■■□□□ 1.94
HOXA9-205ENST00000489695 DBNLQ9UJU6 430 aaKnown RBP27.2■■□□□ 1.94
HOXA9-205ENST00000489695 NDUFB9Q9Y6M9 179 aa27.2■■□□□ 1.94
HOXA9-205ENST00000489695 MSCO60682 206 aa27.19■■□□□ 1.94
HOXA9-205ENST00000489695 IGHA2P01877 340 aa27.19■■□□□ 1.94
HOXA9-205ENST00000489695 VCAM1P19320 739 aa27.19■■□□□ 1.94
HOXA9-205ENST00000489695 ATP8B2P98198 1209 aa27.19■■□□□ 1.94
HOXA9-205ENST00000489695 HNRNPUQ00839 825 aaKnown RBP eCLIP27.19■■□□□ 1.94
HOXA9-205ENST00000489695 OS9Q13438 667 aaPredicted RBP27.19■■□□□ 1.94
HOXA9-205ENST00000489695 GRB14Q14449 540 aa27.19■■□□□ 1.94
HOXA9-205ENST00000489695 LPAR1Q92633 364 aa27.19■■□□□ 1.94
HOXA9-205ENST00000489695 MYO5AQ9Y4I1 1855 aaKnown RBP27.19■■□□□ 1.94
HOXA9-205ENST00000489695 RAB3GAP1Q15042 981 aa27.18■■□□□ 1.94
HOXA9-205ENST00000489695 MIGA1Q8NAN2 632 aa27.18■■□□□ 1.94
HOXA9-205ENST00000489695 BTBD7Q9P203 1132 aa27.18■■□□□ 1.94
HOXA9-205ENST00000489695 EYSQ5T1H1 3165 aa27.18■■□□□ 1.94
HOXA9-205ENST00000489695 FRMPD3Q5JV73 1810 aa27.18■■□□□ 1.94
HOXA9-205ENST00000489695 SURF6O75683 361 aaKnown RBP27.17■■□□□ 1.94
HOXA9-205ENST00000489695 USP5P45974 858 aa27.17■■□□□ 1.94
HOXA9-205ENST00000489695 ATP2B2Q01814 1243 aa27.17■■□□□ 1.94
HOXA9-205ENST00000489695 CERKLQ49MI3 558 aaPredicted RBP27.17■■□□□ 1.94
HOXA9-205ENST00000489695 TMEM57Q8N5G2 664 aa27.17■■□□□ 1.94
HOXA9-205ENST00000489695 ACER1Q8TDN7 264 aa27.17■■□□□ 1.94
HOXA9-205ENST00000489695 LBHD1Q9BQE6 289 aaPredicted RBP27.17■■□□□ 1.94
HOXA9-205ENST00000489695 NOP58Q9Y2X3 529 aaKnown RBP27.17■■□□□ 1.94
HOXA9-205ENST00000489695 VCANP13611 3396 aa27.17■■□□□ 1.94
HOXA9-205ENST00000489695 DNM1LO00429 736 aa27.16■■□□□ 1.94
HOXA9-205ENST00000489695 IDH1O75874 414 aaKnown RBP27.16■■□□□ 1.94
HOXA9-205ENST00000489695 ABCB5Q2M3G0 1257 aa27.16■■□□□ 1.94
HOXA9-205ENST00000489695 WDR78Q5VTH9 848 aa27.16■■□□□ 1.94
HOXA9-205ENST00000489695 TTC6Q86TZ1 520 aa27.16■■□□□ 1.94
HOXA9-205ENST00000489695 NPLOC4Q8TAT6 608 aa27.16■■□□□ 1.94
HOXA9-205ENST00000489695 GUCD1Q96NT3 240 aa27.16■■□□□ 1.94
HOXA9-205ENST00000489695 TLR7Q9NYK1 1049 aaKnown RBP27.16■■□□□ 1.94
HOXA9-205ENST00000489695 IVNS1ABPQ9Y6Y0 642 aa27.16■■□□□ 1.94
HOXA9-205ENST00000489695 SPDYE16A6NNV3 312 aaPredicted RBP27.15■■□□□ 1.94
HOXA9-205ENST00000489695 TMED8Q6PL24 325 aaPredicted RBP27.15■■□□□ 1.94
HOXA9-205ENST00000489695 TRPV1Q8NER1 839 aa27.15■■□□□ 1.94
HOXA9-205ENST00000489695 CNGA1P29973 690 aa27.14■■□□□ 1.94
HOXA9-205ENST00000489695 CYP2C19P33261 490 aa27.14■■□□□ 1.94
HOXA9-205ENST00000489695 SHMT1P34896 483 aa27.14■■□□□ 1.94
HOXA9-205ENST00000489695 MAGEB6Q8N7X4 407 aa27.14■■□□□ 1.94
HOXA9-205ENST00000489695 EAF2Q96CJ1 260 aaPredicted RBP27.14■■□□□ 1.94
HOXA9-205ENST00000489695 CCDC8Q9H0W5 538 aaPredicted RBP27.14■■□□□ 1.94
HOXA9-205ENST00000489695 RPAP3Q9H6T3 665 aaPredicted RBP27.14■■□□□ 1.94
HOXA9-205ENST00000489695 MYH1P12882 1939 aa27.14■■□□□ 1.93
HOXA9-205ENST00000489695 GUCY1A2P33402 732 aa27.13■■□□□ 1.93
HOXA9-205ENST00000489695 ATN1P54259 1190 aaPredicted RBP27.13■■□□□ 1.93
HOXA9-205ENST00000489695 COL25A1Q9BXS0 654 aaPredicted RBP27.13■■□□□ 1.93
HOXA9-205ENST00000489695 CABP5Q9NP86 173 aa27.13■■□□□ 1.93
HOXA9-205ENST00000489695 CYBAP13498 195 aa27.12■■□□□ 1.93
HOXA9-205ENST00000489695 PLCD1P51178 756 aa27.12■■□□□ 1.93
HOXA9-205ENST00000489695 RTP1P59025 263 aa27.11■■□□□ 1.93
HOXA9-205ENST00000489695 OLFML2BQ68BL8 750 aa27.11■■□□□ 1.93
HOXA9-205ENST00000489695 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.11■■□□□ 1.93
HOXA9-205ENST00000489695 ANTXR1Q9H6X2 564 aa27.11■■□□□ 1.93
HOXA9-205ENST00000489695 STRNO43815 780 aa27.1■■□□□ 1.93
HOXA9-205ENST00000489695 GABPAQ06546 454 aa27.1■■□□□ 1.93
HOXA9-205ENST00000489695 MAP3K12Q12852 859 aa27.1■■□□□ 1.93
HOXA9-205ENST00000489695 ZKSCAN2Q63HK3 967 aa27.1■■□□□ 1.93
HOXA9-205ENST00000489695 RIOK1Q9BRS2 568 aaKnown RBP27.1■■□□□ 1.93
HOXA9-205ENST00000489695 PRKAG2Q9UGJ0 569 aa27.1■■□□□ 1.93
HOXA9-205ENST00000489695 COG2Q14746 738 aa27.09■■□□□ 1.93
HOXA9-205ENST00000489695 ARRDC4Q8NCT1 418 aa27.09■■□□□ 1.93
HOXA9-205ENST00000489695 MOV10L1Q9BXT6 1211 aaKnown RBP27.09■■□□□ 1.93
HOXA9-205ENST00000489695 C1orf115Q9H7X2 142 aa27.09■■□□□ 1.93
HOXA9-205ENST00000489695 HOXC10Q9NYD6 342 aa27.09■■□□□ 1.93
HOXA9-205ENST00000489695 ADORA2AP29274 412 aa27.08■■□□□ 1.93
HOXA9-205ENST00000489695 SEPT2Q15019 361 aa27.08■■□□□ 1.93
HOXA9-205ENST00000489695 GJC2Q5T442 439 aaPredicted RBP27.08■■□□□ 1.93
HOXA9-205ENST00000489695 DPP9Q86TI2 863 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms