RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 USP17L15C9J2P7 530 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 USP17L13C9JLJ4 530 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 USP17L11C9JVI0 530 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 USP17L18D6R9N7 530 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 USP17L22D6RA61 530 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 USP17L17D6RBQ6 530 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 USP17L19D6RCP7 530 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 USP17L20D6RJB6 530 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 CCER2I3L3R5 266 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 IGSF3O75054 1194 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 CNMDO75829 334 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 USP17L24Q0WX57 530 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 MAP2K5Q13163 448 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 RAB3GAP1Q15042 981 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 LRRC26Q2I0M4 334 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 LRIT3Q3SXY7 679 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 WDR78Q5VTH9 848 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 GPR153Q6NV75 609 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 TATDN1Q6P1N9 297 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 MAGEB6Q8N7X4 407 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 EAF2Q96CJ1 260 aaPredicted RBP20.71■□□□□ 0.91
TOP3B-217ENST00000489581 RABGAP1Q9Y3P9 1069 aa20.71■□□□□ 0.91
TOP3B-217ENST00000489581 A0A0C4DFX4 3053 aa20.7■□□□□ 0.9
TOP3B-217ENST00000489581 EDC3Q96F86 508 aaKnown RBP20.7■□□□□ 0.9
TOP3B-217ENST00000489581 C12orf42Q96LP6 360 aa20.7■□□□□ 0.9
TOP3B-217ENST00000489581 SERPINB13Q9UIV8 391 aa20.7■□□□□ 0.9
TOP3B-217ENST00000489581 NOP58Q9Y2X3 529 aaKnown RBP20.7■□□□□ 0.9
TOP3B-217ENST00000489581 CCNA1P78396 465 aa20.69■□□□□ 0.9
TOP3B-217ENST00000489581 CERKLQ49MI3 558 aaPredicted RBP20.69■□□□□ 0.9
TOP3B-217ENST00000489581 CATSPERGQ6ZRH7 1159 aa20.69■□□□□ 0.9
TOP3B-217ENST00000489581 ACER1Q8TDN7 264 aa20.69■□□□□ 0.9
TOP3B-217ENST00000489581 ANTXR1Q9H6X2 564 aa20.69■□□□□ 0.9
TOP3B-217ENST00000489581 FLRT1Q9NZU1 646 aa20.69■□□□□ 0.9
TOP3B-217ENST00000489581 CUL9Q8IWT3 2517 aa20.68■□□□□ 0.9
TOP3B-217ENST00000489581 GLRX3O76003 335 aaKnown RBP20.68■□□□□ 0.9
TOP3B-217ENST00000489581 USP14P54578 494 aa20.68■□□□□ 0.9
TOP3B-217ENST00000489581 MDM2Q00987 491 aaPredicted RBP20.68■□□□□ 0.9
TOP3B-217ENST00000489581 ABCB5Q2M3G0 1257 aa20.68■□□□□ 0.9
TOP3B-217ENST00000489581 VCAM1P19320 739 aa20.67■□□□□ 0.9
TOP3B-217ENST00000489581 MFSD14CQ5VZR4 134 aa20.67■□□□□ 0.9
TOP3B-217ENST00000489581 TTC6Q86TZ1 520 aa20.67■□□□□ 0.9
TOP3B-217ENST00000489581 CERS3Q8IU89 383 aa20.67■□□□□ 0.9
TOP3B-217ENST00000489581 ITPRIPQ8IWB1 547 aa20.67■□□□□ 0.9
TOP3B-217ENST00000489581 KIAA1683Q9H0B3 1180 aa20.67■□□□□ 0.9
TOP3B-217ENST00000489581 EHD4Q9H223 541 aa20.67■□□□□ 0.9
TOP3B-217ENST00000489581 CABP5Q9NP86 173 aa20.67■□□□□ 0.9
TOP3B-217ENST00000489581 BTBD7Q9P203 1132 aa20.67■□□□□ 0.9
TOP3B-217ENST00000489581 SLC15A5A6NIM6 579 aa20.66■□□□□ 0.9
TOP3B-217ENST00000489581 PTPREP23469 700 aa20.66■□□□□ 0.9
TOP3B-217ENST00000489581 CNGA1P29973 690 aa20.66■□□□□ 0.9
TOP3B-217ENST00000489581 PLCD1P51178 756 aa20.66■□□□□ 0.9
TOP3B-217ENST00000489581 MAP3K12Q12852 859 aa20.66■□□□□ 0.9
TOP3B-217ENST00000489581 FTSJ3Q8IY81 847 aaKnown RBP20.66■□□□□ 0.9
TOP3B-217ENST00000489581 SENP6Q9GZR1 1112 aaPredicted RBP20.66■□□□□ 0.9
TOP3B-217ENST00000489581 MTMR10Q9NXD2 777 aa20.66■□□□□ 0.9
TOP3B-217ENST00000489581 IVNS1ABPQ9Y6Y0 642 aa20.66■□□□□ 0.9
TOP3B-217ENST00000489581 DNAH12Q6ZR08 3092 aa20.65■□□□□ 0.9
TOP3B-217ENST00000489581 SHMT1P34896 483 aa20.65■□□□□ 0.9
TOP3B-217ENST00000489581 ATP2B2Q01814 1243 aa20.65■□□□□ 0.9
TOP3B-217ENST00000489581 NPLOC4Q8TAT6 608 aa20.65■□□□□ 0.9
TOP3B-217ENST00000489581 RPAP3Q9H6T3 665 aaPredicted RBP20.65■□□□□ 0.9
TOP3B-217ENST00000489581 SPDYE16A6NNV3 312 aaPredicted RBP20.64■□□□□ 0.89
TOP3B-217ENST00000489581 POLR3DP05423 398 aaPredicted RBP20.64■□□□□ 0.89
TOP3B-217ENST00000489581 RLBP1P12271 317 aa20.64■□□□□ 0.89
TOP3B-217ENST00000489581 GUCY1A2P33402 732 aa20.64■□□□□ 0.89
TOP3B-217ENST00000489581 LBX2Q6XYB7 198 aa20.64■□□□□ 0.89
TOP3B-217ENST00000489581 DDX20Q9UHI6 824 aaKnown RBP20.64■□□□□ 0.89
TOP3B-217ENST00000489581 STXBP5LQ9Y2K9 1186 aa20.64■□□□□ 0.89
TOP3B-217ENST00000489581 NAV1Q8NEY1 1877 aa20.63■□□□□ 0.89
TOP3B-217ENST00000489581 CYP2C19P33261 490 aa20.63■□□□□ 0.89
TOP3B-217ENST00000489581 ATN1P54259 1190 aaPredicted RBP20.63■□□□□ 0.89
TOP3B-217ENST00000489581 SEPT2Q15019 361 aa20.63■□□□□ 0.89
TOP3B-217ENST00000489581 AACSQ86V21 672 aa20.63■□□□□ 0.89
TOP3B-217ENST00000489581 RIOK1Q9BRS2 568 aaKnown RBP20.63■□□□□ 0.89
TOP3B-217ENST00000489581 EXOC6BQ9Y2D4 811 aa20.63■□□□□ 0.89
TOP3B-217ENST00000489581 HOXC6P09630 235 aa20.62■□□□□ 0.89
TOP3B-217ENST00000489581 EVX2Q03828 476 aa20.62■□□□□ 0.89
TOP3B-217ENST00000489581 GRB14Q14449 540 aa20.62■□□□□ 0.89
TOP3B-217ENST00000489581 MAGEB6P1A0A0J9YX57 407 aa20.61■□□□□ 0.89
TOP3B-217ENST00000489581 CEP85Q6P2H3 762 aa20.61■□□□□ 0.89
TOP3B-217ENST00000489581 TRPV1Q8NER1 839 aa20.61■□□□□ 0.89
TOP3B-217ENST00000489581 LPAR1Q92633 364 aa20.61■□□□□ 0.89
TOP3B-217ENST00000489581 MYH8P13535 1937 aa20.61■□□□□ 0.89
TOP3B-217ENST00000489581 ZNFX1Q9P2E3 1918 aaKnown RBP20.61■□□□□ 0.89
TOP3B-217ENST00000489581 SMCHD1A6NHR9 2005 aa20.6■□□□□ 0.89
TOP3B-217ENST00000489581 A0A1W2PRG0 241 aa20.6■□□□□ 0.89
TOP3B-217ENST00000489581 MPHOSPH10O00566 681 aaKnown RBP20.6■□□□□ 0.89
TOP3B-217ENST00000489581 MSCO60682 206 aa20.6■□□□□ 0.89
TOP3B-217ENST00000489581 GABPAQ06546 454 aa20.6■□□□□ 0.89
TOP3B-217ENST00000489581 DPP9Q86TI2 863 aa20.6■□□□□ 0.89
TOP3B-217ENST00000489581 LBHD1Q9BQE6 289 aaPredicted RBP20.6■□□□□ 0.89
TOP3B-217ENST00000489581 IL1RAPL2Q9NP60 686 aa20.6■□□□□ 0.89
TOP3B-217ENST00000489581 MCM9Q9NXL9 1143 aa20.6■□□□□ 0.89
TOP3B-217ENST00000489581 RLFQ13129 1914 aa20.6■□□□□ 0.89
TOP3B-217ENST00000489581 COG2Q14746 738 aa20.59■□□□□ 0.89
TOP3B-217ENST00000489581 GJC2Q5T442 439 aaPredicted RBP20.59■□□□□ 0.89
TOP3B-217ENST00000489581 TMED8Q6PL24 325 aaPredicted RBP20.59■□□□□ 0.89
TOP3B-217ENST00000489581 ERC1Q8IUD2 1116 aa20.59■□□□□ 0.89
TOP3B-217ENST00000489581 MOV10L1Q9BXT6 1211 aaKnown RBP20.59■□□□□ 0.89
TOP3B-217ENST00000489581 CRNKL1Q9BZJ0 848 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms