RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 PI4KAP2A4QPH2 592 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 USP17L5A8MUK1 530 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 F8W735 103 aaPredicted RBP9.7□□□□□ -0.86
SMC6-209ENST00000489535 PIP4K2AP48426 406 aaPredicted RBP9.7□□□□□ -0.86
SMC6-209ENST00000489535 AIMP1Q12904 312 aaKnown RBP9.7□□□□□ -0.86
SMC6-209ENST00000489535 HIF1AQ16665 826 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 CCDC102BQ68D86 513 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 ELMSAN1Q6PJG2 1045 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 Q6ZS46 218 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 PI4KAP1Q8N8J0 262 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 TRPM4Q8TD43 1214 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 DNAAF4Q8WXU2 420 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 C4AP0C0L4 1744 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 C4BP0C0L5 1744 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 LAMB2P55268 1798 aa9.7□□□□□ -0.86
SMC6-209ENST00000489535 M0R2N6 131 aa9.69□□□□□ -0.86
SMC6-209ENST00000489535 PPP1R12BO60237 982 aaPredicted RBP9.69□□□□□ -0.86
SMC6-209ENST00000489535 DDX58O95786 925 aaKnown RBP9.69□□□□□ -0.86
SMC6-209ENST00000489535 KSR2Q6VAB6 950 aa9.69□□□□□ -0.86
SMC6-209ENST00000489535 XAGE3Q8WTP9 111 aa9.69□□□□□ -0.86
SMC6-209ENST00000489535 MEIS3Q99687 375 aa9.69□□□□□ -0.86
SMC6-209ENST00000489535 MRPL18Q9H0U6 180 aaKnown RBP9.69□□□□□ -0.86
SMC6-209ENST00000489535 ALG2Q9H553 416 aa9.69□□□□□ -0.86
SMC6-209ENST00000489535 QTRT2Q9H974 415 aaKnown RBP9.69□□□□□ -0.86
SMC6-209ENST00000489535 ZFATQ9P243 1243 aa9.69□□□□□ -0.86
SMC6-209ENST00000489535 DMGDHQ9UI17 866 aaKnown RBP9.69□□□□□ -0.86
SMC6-209ENST00000489535 MAP3K2Q9Y2U5 619 aa9.69□□□□□ -0.86
SMC6-209ENST00000489535 UBR3Q6ZT12 1888 aa9.68□□□□□ -0.86
SMC6-209ENST00000489535 SCN7AQ01118 1682 aa9.68□□□□□ -0.86
SMC6-209ENST00000489535 IGLV1-40P01703 118 aa9.68□□□□□ -0.86
SMC6-209ENST00000489535 CLDN10P78369 228 aa9.68□□□□□ -0.86
SMC6-209ENST00000489535 HDAC1Q13547 482 aaPredicted RBP9.68□□□□□ -0.86
SMC6-209ENST00000489535 COPS6Q7L5N1 327 aa9.68□□□□□ -0.86
SMC6-209ENST00000489535 TRIM50Q86XT4 487 aa9.68□□□□□ -0.86
SMC6-209ENST00000489535 DNAJC10Q8IXB1 793 aa9.68□□□□□ -0.86
SMC6-209ENST00000489535 TEX13AQ9BXU3 409 aaPredicted RBP9.68□□□□□ -0.86
SMC6-209ENST00000489535 SRCIN1Q9C0H9 1055 aa9.68□□□□□ -0.86
SMC6-209ENST00000489535 RAXQ9Y2V3 346 aa9.68□□□□□ -0.86
SMC6-209ENST00000489535 TNS1Q9HBL0 1735 aaKnown RBP9.68□□□□□ -0.86
SMC6-209ENST00000489535 GSC2O15499 205 aa9.67□□□□□ -0.86
SMC6-209ENST00000489535 A1BGP04217 495 aa9.67□□□□□ -0.86
SMC6-209ENST00000489535 BEND3Q5T5X7 828 aa9.67□□□□□ -0.86
SMC6-209ENST00000489535 DHX32Q7L7V1 743 aaKnown RBP9.67□□□□□ -0.86
SMC6-209ENST00000489535 LRP10Q7Z4F1 713 aa9.67□□□□□ -0.86
SMC6-209ENST00000489535 STAG2Q8N3U4 1231 aa9.67□□□□□ -0.86
SMC6-209ENST00000489535 C2orf49Q9BVC5 232 aaPredicted RBP9.67□□□□□ -0.86
SMC6-209ENST00000489535 BCS1LQ9Y276 419 aa9.67□□□□□ -0.86
SMC6-209ENST00000489535 PALLDQ8WX93 1383 aa9.66□□□□□ -0.86
SMC6-209ENST00000489535 DDX60Q8IY21 1712 aaKnown RBP9.66□□□□□ -0.86
SMC6-209ENST00000489535 TGFBR3LH3BV60 316 aa9.66□□□□□ -0.86
SMC6-209ENST00000489535 KCNQ2O43526 872 aa9.66□□□□□ -0.86
SMC6-209ENST00000489535 GNAI3P08754 354 aa9.66□□□□□ -0.86
SMC6-209ENST00000489535 SPINK2P20155 84 aa9.66□□□□□ -0.86
SMC6-209ENST00000489535 GPLD1P80108 840 aa9.66□□□□□ -0.86
SMC6-209ENST00000489535 MLLT1Q03111 559 aaPredicted RBP9.66□□□□□ -0.86
SMC6-209ENST00000489535 SKAP1Q86WV1 359 aa9.66□□□□□ -0.86
SMC6-209ENST00000489535 TSEN2Q8NCE0 465 aaKnown RBP9.66□□□□□ -0.86
SMC6-209ENST00000489535 ALDH1L1O75891 902 aa9.65□□□□□ -0.86
SMC6-209ENST00000489535 STARD3NLO95772 234 aa9.65□□□□□ -0.86
SMC6-209ENST00000489535 GNAI2P04899 355 aa9.65□□□□□ -0.86
SMC6-209ENST00000489535 NEXNQ0ZGT2 675 aa9.65□□□□□ -0.86
SMC6-209ENST00000489535 ZDHHC13Q8IUH4 622 aa9.65□□□□□ -0.86
SMC6-209ENST00000489535 RPAP2Q8IXW5 612 aaPredicted RBP9.65□□□□□ -0.86
SMC6-209ENST00000489535 ANKRD44Q8N8A2 993 aa9.65□□□□□ -0.86
SMC6-209ENST00000489535 SMARCC1Q92922 1105 aaPredicted RBP9.65□□□□□ -0.86
SMC6-209ENST00000489535 MYD88Q99836 296 aa9.65□□□□□ -0.86
SMC6-209ENST00000489535 KRTAP17-1Q9BYP8 105 aa9.65□□□□□ -0.86
SMC6-209ENST00000489535 SMG9Q9H0W8 520 aaKnown RBP9.65□□□□□ -0.86
SMC6-209ENST00000489535 RGPD3A6NKT7 1758 aaPredicted RBP9.65□□□□□ -0.87
SMC6-209ENST00000489535 RGPD4Q7Z3J3 1758 aa9.65□□□□□ -0.87
SMC6-209ENST00000489535 UBTFL1P0CB47 393 aaPredicted RBP9.64□□□□□ -0.87
SMC6-209ENST00000489535 RGS3P49796 1198 aa9.64□□□□□ -0.87
SMC6-209ENST00000489535 ATP1A2P50993 1020 aa9.64□□□□□ -0.87
SMC6-209ENST00000489535 CWF19L2Q2TBE0 894 aaKnown RBP9.64□□□□□ -0.87
SMC6-209ENST00000489535 CEP85Q6P2H3 762 aa9.64□□□□□ -0.87
SMC6-209ENST00000489535 TTLL7Q6ZT98 887 aa9.64□□□□□ -0.87
SMC6-209ENST00000489535 SIRT2Q8IXJ6 389 aa9.64□□□□□ -0.87
SMC6-209ENST00000489535 LINS1Q8NG48 757 aa9.64□□□□□ -0.87
SMC6-209ENST00000489535 PLBD2Q8NHP8 589 aa9.64□□□□□ -0.87
SMC6-209ENST00000489535 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
SMC6-209ENST00000489535 USP44Q9H0E7 712 aa9.64□□□□□ -0.87
SMC6-209ENST00000489535 LRRFIP2Q9Y608 721 aaKnown RBP9.64□□□□□ -0.87
SMC6-209ENST00000489535 LOC102724428A0A0B4J2F2 783 aa9.63□□□□□ -0.87
SMC6-209ENST00000489535 CYP19A1P11511 503 aaPredicted RBP9.63□□□□□ -0.87
SMC6-209ENST00000489535 SIK1P57059 783 aa9.63□□□□□ -0.87
SMC6-209ENST00000489535 ZNF772Q68DY9 489 aaPredicted RBP9.63□□□□□ -0.87
SMC6-209ENST00000489535 KRT25Q7Z3Z0 450 aa9.63□□□□□ -0.87
SMC6-209ENST00000489535 SMC5Q8IY18 1101 aa9.63□□□□□ -0.87
SMC6-209ENST00000489535 AGGF1Q8N302 714 aaeCLIP9.63□□□□□ -0.87
SMC6-209ENST00000489535 GCC1Q96CN9 775 aa9.63□□□□□ -0.87
SMC6-209ENST00000489535 IFT43Q96FT9 208 aa9.63□□□□□ -0.87
SMC6-209ENST00000489535 C9orf78Q9NZ63 289 aaPredicted RBP9.63□□□□□ -0.87
SMC6-209ENST00000489535 A0A1B0GUL6 1792 aa9.63□□□□□ -0.87
SMC6-209ENST00000489535 COL24A1Q17RW2 1714 aa9.62□□□□□ -0.87
SMC6-209ENST00000489535 HMMRO75330 724 aa9.62□□□□□ -0.87
SMC6-209ENST00000489535 IGKV5-2P06315 115 aa9.62□□□□□ -0.87
SMC6-209ENST00000489535 NBPF7P0C2Y1 421 aaPredicted RBP9.62□□□□□ -0.87
SMC6-209ENST00000489535 TARSP26639 723 aaKnown RBP9.62□□□□□ -0.87
SMC6-209ENST00000489535 KIF6Q6ZMV9 814 aa9.62□□□□□ -0.87
SMC6-209ENST00000489535 FBXO41Q8TF61 875 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms