RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 OTUD7BQ6GQQ9 843 aa18.35■□□□□ 0.53
SMIM11A-206ENST00000489469 KANSL2Q9H9L4 492 aa18.35■□□□□ 0.53
SMIM11A-206ENST00000489469 RBM8AQ9Y5S9 174 aaKnown RBP18.35■□□□□ 0.53
SMIM11A-206ENST00000489469 LOC285556D6RIA3 1793 aa18.35■□□□□ 0.53
SMIM11A-206ENST00000489469 TESPA1A2RU30 521 aaPredicted RBP18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 C19orf81C9J6K1 198 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 PRDM1O75626 825 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 TSPY3P0CV98 308 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 TSPY8P0CW00 308 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 JAG1P78504 1218 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 SPP2Q13103 211 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 SEPT2Q15019 361 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 FASTKD5Q7L8L6 764 aaKnown RBP18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 MS4A4AQ96JQ5 239 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 SH2D4AQ9H788 454 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 CNNM2Q9H8M5 875 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 ARHGEF10LQ9HCE6 1279 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 TOMM22Q9NS69 142 aa18.34■□□□□ 0.53
SMIM11A-206ENST00000489469 CCL15-CCL14A0A0B4J2E2 113 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 A0A0G2JLL6 359 aaPredicted RBP18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 TRIM75PA6NK02 468 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 TSPY2A6NKD2 308 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 USP17L10C9JJH3 530 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 ALDH1A1P00352 501 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 GUCY1A2P33402 732 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 ICA1Q05084 483 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 CCL15Q16663 113 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 RNF20Q5VTR2 975 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 PRRT2Q7Z6L0 340 aaPredicted RBP18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 NEDD1Q8NHV4 660 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 ESR2Q92731 530 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 ZIC5Q96T25 663 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 BEGAINQ9BUH8 593 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 KRT23Q9C075 422 aa18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.33■□□□□ 0.52
SMIM11A-206ENST00000489469 RANBP6O60518 1105 aaKnown RBP18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 CYP21A2P08686 494 aa18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 USP14P54578 494 aa18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 BACE1P56817 501 aa18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 TFAP4Q01664 338 aa18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 TRDNQ13061 729 aa18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 SHROOM1Q2M3G4 852 aaPredicted RBP18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 SH3D19Q5HYK7 790 aa18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 CCDC84Q86UT8 332 aaPredicted RBP18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 TBC1D10CQ8IV04 446 aa18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 FEZ1Q99689 392 aa18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 NBPF3Q9H094 633 aa18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 ZCCHC17Q9NP64 241 aaKnown RBP18.32■□□□□ 0.52
SMIM11A-206ENST00000489469 CA12O43570 354 aa18.31■□□□□ 0.52
SMIM11A-206ENST00000489469 RRP12Q5JTH9 1297 aaKnown RBP18.31■□□□□ 0.52
SMIM11A-206ENST00000489469 CHRDL2Q6WN34 429 aa18.31■□□□□ 0.52
SMIM11A-206ENST00000489469 PROCA1Q8NCQ7 364 aaPredicted RBP18.31■□□□□ 0.52
SMIM11A-206ENST00000489469 KIAA1683Q9H0B3 1180 aa18.31■□□□□ 0.52
SMIM11A-206ENST00000489469 TMOD4Q9NZQ9 345 aa18.31■□□□□ 0.52
SMIM11A-206ENST00000489469 IGKV6D-41A0A0C4DH26 115 aa18.3■□□□□ 0.52
SMIM11A-206ENST00000489469 MTMR2Q13614 643 aa18.3■□□□□ 0.52
SMIM11A-206ENST00000489469 NECTIN1Q15223 517 aa18.3■□□□□ 0.52
SMIM11A-206ENST00000489469 CCDC178Q5BJE1 867 aa18.3■□□□□ 0.52
SMIM11A-206ENST00000489469 USP17L2Q6R6M4 530 aa18.3■□□□□ 0.52
SMIM11A-206ENST00000489469 IFNL1Q8IU54 200 aa18.3■□□□□ 0.52
SMIM11A-206ENST00000489469 BRI3BPQ8WY22 251 aa18.3■□□□□ 0.52
SMIM11A-206ENST00000489469 NYAP2Q9P242 653 aa18.3■□□□□ 0.52
SMIM11A-206ENST00000489469 SYNPO2Q9UMS6 1093 aa18.3■□□□□ 0.52
SMIM11A-206ENST00000489469 TTLL1O95922 423 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 HMGCS2P54868 508 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 PABPC4Q13310 644 aaKnown RBP eCLIP18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 FAM47AQ5JRC9 791 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 CREB3L3Q68CJ9 461 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 ANKRD23Q86SG2 305 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 C12orf42Q96LP6 360 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 INCENPQ9NQS7 918 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 TCP11L1Q9NUJ3 509 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 WBP1LQ9NX94 342 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 SAGE1Q9NXZ1 904 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 MTMR4Q9NYA4 1195 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 SLC45A1Q9Y2W3 748 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 TMX2Q9Y320 296 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 TACC3Q9Y6A5 838 aa18.29■□□□□ 0.52
SMIM11A-206ENST00000489469 NEDD4P46934 1319 aa18.28■□□□□ 0.52
SMIM11A-206ENST00000489469 SLC27A2O14975 620 aa18.28■□□□□ 0.52
SMIM11A-206ENST00000489469 EEF2P13639 858 aaKnown RBP18.28■□□□□ 0.52
SMIM11A-206ENST00000489469 ZKSCAN1P17029 563 aaPredicted RBP18.28■□□□□ 0.52
SMIM11A-206ENST00000489469 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
SMIM11A-206ENST00000489469 RALYLQ86SE5 291 aaKnown RBP18.28■□□□□ 0.52
SMIM11A-206ENST00000489469 IQCA1Q86XH1 822 aa18.28■□□□□ 0.52
SMIM11A-206ENST00000489469 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
SMIM11A-206ENST00000489469 CEP95Q96GE4 821 aa18.28■□□□□ 0.52
SMIM11A-206ENST00000489469 AGTPBP1Q9UPW5 1226 aa18.28■□□□□ 0.52
SMIM11A-206ENST00000489469 E7EWF7 191 aa18.27■□□□□ 0.52
SMIM11A-206ENST00000489469 IGF2BP3O00425 579 aaKnown RBP eCLIP18.27■□□□□ 0.52
SMIM11A-206ENST00000489469 ATP2B2Q01814 1243 aa18.27■□□□□ 0.52
SMIM11A-206ENST00000489469 MOGSQ13724 837 aa18.27■□□□□ 0.52
SMIM11A-206ENST00000489469 KRT32Q14532 448 aa18.27■□□□□ 0.52
SMIM11A-206ENST00000489469 ACER1Q8TDN7 264 aa18.27■□□□□ 0.52
SMIM11A-206ENST00000489469 LPAR1Q92633 364 aa18.27■□□□□ 0.52
SMIM11A-206ENST00000489469 MKL1Q969V6 931 aa18.27■□□□□ 0.52
SMIM11A-206ENST00000489469 PTPN18Q99952 460 aa18.27■□□□□ 0.52
SMIM11A-206ENST00000489469 GOPCQ9HD26 462 aa18.27■□□□□ 0.52
SMIM11A-206ENST00000489469 A0A1W2PRG0 241 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms