RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 PORCNQ9H237 461 aa14.5□□□□□ -0.09
SFXN3-207ENST00000489434 RABGAP1Q9Y3P9 1069 aa14.5□□□□□ -0.09
SFXN3-207ENST00000489434 ALPK3Q96L96 1907 aa14.5□□□□□ -0.09
SFXN3-207ENST00000489434 LAMA3Q16787 3333 aa14.49□□□□□ -0.09
SFXN3-207ENST00000489434 DDX60LQ5H9U9 1706 aaKnown RBP14.49□□□□□ -0.09
SFXN3-207ENST00000489434 PEX10O60683 326 aa14.49□□□□□ -0.09
SFXN3-207ENST00000489434 BMP8BP34820 402 aa14.49□□□□□ -0.09
SFXN3-207ENST00000489434 TTF1Q15361 905 aaPredicted RBP14.49□□□□□ -0.09
SFXN3-207ENST00000489434 MORN1Q5T089 497 aa14.49□□□□□ -0.09
SFXN3-207ENST00000489434 WDR78Q5VTH9 848 aa14.49□□□□□ -0.09
SFXN3-207ENST00000489434 MFSD14CQ5VZR4 134 aa14.49□□□□□ -0.09
SFXN3-207ENST00000489434 C12orf42Q96LP6 360 aa14.49□□□□□ -0.09
SFXN3-207ENST00000489434 KIAA1683Q9H0B3 1180 aa14.49□□□□□ -0.09
SFXN3-207ENST00000489434 ZMYND8Q9ULU4 1186 aaPredicted RBP14.49□□□□□ -0.09
SFXN3-207ENST00000489434 IVNS1ABPQ9Y6Y0 642 aa14.49□□□□□ -0.09
SFXN3-207ENST00000489434 A0A0C4DFX4 3053 aa14.49□□□□□ -0.09
SFXN3-207ENST00000489434 POLR3DP05423 398 aaPredicted RBP14.48□□□□□ -0.09
SFXN3-207ENST00000489434 CACNB2Q08289 660 aaPredicted RBP14.48□□□□□ -0.09
SFXN3-207ENST00000489434 MAP2K5Q13163 448 aa14.48□□□□□ -0.09
SFXN3-207ENST00000489434 Q3C1V9 767 aa14.48□□□□□ -0.09
SFXN3-207ENST00000489434 USP6NLQ92738 828 aa14.48□□□□□ -0.09
SFXN3-207ENST00000489434 EDC3Q96F86 508 aaKnown RBP14.48□□□□□ -0.09
SFXN3-207ENST00000489434 GDF15Q99988 308 aa14.48□□□□□ -0.09
SFXN3-207ENST00000489434 CRNKL1Q9BZJ0 848 aaKnown RBP14.48□□□□□ -0.09
SFXN3-207ENST00000489434 MAGEB6P1A0A0J9YX57 407 aa14.47□□□□□ -0.09
SFXN3-207ENST00000489434 SLC15A5A6NIM6 579 aa14.47□□□□□ -0.09
SFXN3-207ENST00000489434 RLBP1P12271 317 aa14.47□□□□□ -0.09
SFXN3-207ENST00000489434 MNX1P50219 401 aaPredicted RBP14.47□□□□□ -0.09
SFXN3-207ENST00000489434 CEP85Q6P2H3 762 aa14.47□□□□□ -0.09
SFXN3-207ENST00000489434 CATSPERGQ6ZRH7 1159 aa14.47□□□□□ -0.09
SFXN3-207ENST00000489434 EXOC6BQ9Y2D4 811 aa14.47□□□□□ -0.09
SFXN3-207ENST00000489434 NDUFB9Q9Y6M9 179 aa14.47□□□□□ -0.09
SFXN3-207ENST00000489434 DNAH12Q6ZR08 3092 aa14.47□□□□□ -0.09
SFXN3-207ENST00000489434 MS4A1P11836 297 aa14.46□□□□□ -0.09
SFXN3-207ENST00000489434 SYN1P17600 705 aa14.46□□□□□ -0.09
SFXN3-207ENST00000489434 VCAM1P19320 739 aa14.46□□□□□ -0.09
SFXN3-207ENST00000489434 ATP2B2Q01814 1243 aa14.46□□□□□ -0.09
SFXN3-207ENST00000489434 CCL14Q16627 93 aa14.46□□□□□ -0.09
SFXN3-207ENST00000489434 SLC9C2Q5TAH2 1124 aa14.46□□□□□ -0.09
SFXN3-207ENST00000489434 GPR153Q6NV75 609 aa14.46□□□□□ -0.09
SFXN3-207ENST00000489434 ANTXR1Q9H6X2 564 aa14.46□□□□□ -0.09
SFXN3-207ENST00000489434 CUL9Q8IWT3 2517 aa14.45□□□□□ -0.1
SFXN3-207ENST00000489434 MPHOSPH10O00566 681 aaKnown RBP14.45□□□□□ -0.1
SFXN3-207ENST00000489434 SOX1O00570 391 aaPredicted RBP14.45□□□□□ -0.1
SFXN3-207ENST00000489434 MSCO60682 206 aa14.45□□□□□ -0.1
SFXN3-207ENST00000489434 CCND3P30281 292 aaPredicted RBP14.45□□□□□ -0.1
SFXN3-207ENST00000489434 SHMT1P34896 483 aa14.45□□□□□ -0.1
SFXN3-207ENST00000489434 MAGEA10P43363 369 aaPredicted RBP14.45□□□□□ -0.1
SFXN3-207ENST00000489434 LBX2Q6XYB7 198 aa14.45□□□□□ -0.1
SFXN3-207ENST00000489434 CLASRPQ8N2M8 674 aaKnown RBP14.45□□□□□ -0.1
SFXN3-207ENST00000489434 SLC17A8Q8NDX2 589 aa14.45□□□□□ -0.1
SFXN3-207ENST00000489434 ACER1Q8TDN7 264 aa14.45□□□□□ -0.1
SFXN3-207ENST00000489434 LRCH3Q96II8 777 aa14.45□□□□□ -0.1
SFXN3-207ENST00000489434 UBE2OQ9C0C9 1292 aaKnown RBP14.45□□□□□ -0.1
SFXN3-207ENST00000489434 RPAP3Q9H6T3 665 aaPredicted RBP14.45□□□□□ -0.1
SFXN3-207ENST00000489434 MCM9Q9NXL9 1143 aa14.45□□□□□ -0.1
SFXN3-207ENST00000489434 COL6A3P12111 3177 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 PFASO15067 1338 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 HMMRO75330 724 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 IFIT2P09913 472 aaKnown RBP14.44□□□□□ -0.1
SFXN3-207ENST00000489434 COL6A1P12109 1028 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 PTPREP23469 700 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 CNGA1P29973 690 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 PLCD1P51178 756 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 LHX8Q68G74 356 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 TDHQ8IZJ6 230 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 RIOK1Q9BRS2 568 aaKnown RBP14.44□□□□□ -0.1
SFXN3-207ENST00000489434 TANGO6Q9C0B7 1094 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 IL1RAPL2Q9NP60 686 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 HOXC10Q9NYD6 342 aa14.44□□□□□ -0.1
SFXN3-207ENST00000489434 CNMDO75829 334 aa14.43□□□□□ -0.1
SFXN3-207ENST00000489434 HOXC6P09630 235 aa14.43□□□□□ -0.1
SFXN3-207ENST00000489434 PDE6AP16499 860 aa14.43□□□□□ -0.1
SFXN3-207ENST00000489434 COG2Q14746 738 aa14.43□□□□□ -0.1
SFXN3-207ENST00000489434 SEPT2Q15019 361 aa14.43□□□□□ -0.1
SFXN3-207ENST00000489434 LRIT3Q3SXY7 679 aa14.43□□□□□ -0.1
SFXN3-207ENST00000489434 POTEEQ6S8J3 1075 aa14.43□□□□□ -0.1
SFXN3-207ENST00000489434 DPP9Q86TI2 863 aa14.43□□□□□ -0.1
SFXN3-207ENST00000489434 RHPN1Q8TCX5 695 aa14.43□□□□□ -0.1
SFXN3-207ENST00000489434 PANK1Q8TE04 598 aa14.43□□□□□ -0.1
SFXN3-207ENST00000489434 KIF1BPQ96EK5 621 aa14.43□□□□□ -0.1
SFXN3-207ENST00000489434 LBHD1Q9BQE6 289 aaPredicted RBP14.43□□□□□ -0.1
SFXN3-207ENST00000489434 NAV1Q8NEY1 1877 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 SPDYE16A6NNV3 312 aaPredicted RBP14.42□□□□□ -0.1
SFXN3-207ENST00000489434 APBB1O00213 710 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 GOLIM4O00461 696 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 STRNO43815 780 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 GRB14Q14449 540 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 TMEM179Q6ZVK1 233 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 AMOTL1Q8IY63 956 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 DEFB123Q8N688 67 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 MB21D1Q8N884 522 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.42□□□□□ -0.1
SFXN3-207ENST00000489434 DNAJC2Q99543 621 aaKnown RBP14.42□□□□□ -0.1
SFXN3-207ENST00000489434 SH2D4AQ9H788 454 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 SLC5A4Q9NY91 659 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 BTBD7Q9P203 1132 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 SWAP70Q9UH65 585 aa14.42□□□□□ -0.1
SFXN3-207ENST00000489434 DDX20Q9UHI6 824 aaKnown RBP14.42□□□□□ -0.1
SFXN3-207ENST00000489434 ZNF532Q9HCE3 1301 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms