RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 MECOMQ03112 1051 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 GRIN1Q05586 938 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 SBK1Q52WX2 424 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 ZNF772Q68DY9 489 aaPredicted RBP22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 TMTC3Q6ZXV5 915 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 VSTM4Q8IW00 320 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 SETDB2Q96T68 719 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 ARPP21Q9UBL0 812 aaPredicted RBP22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 WTIPA6NIX2 430 aaPredicted RBP22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 USP17L12C9JPN9 530 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 USP17L21D6R901 530 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 ACTN4O43707 911 aaKnown RBP22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 MORC3Q14149 939 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 SPECC1Q5M775 1068 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 BICDL1Q6ZP65 573 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 PDCL2Q8N4E4 241 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 KIF18AQ8NI77 898 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 FERMT2Q96AC1 680 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 VPS54Q9P1Q0 977 aa22.41■■□□□ 1.18
SYNGR1-207ENST00000489206 CYP2D7A0A087X1C5 515 aa22.4■■□□□ 1.18
SYNGR1-207ENST00000489206 BMP6P22004 513 aa22.4■■□□□ 1.18
SYNGR1-207ENST00000489206 CFAP100Q494V2 611 aa22.4■■□□□ 1.18
SYNGR1-207ENST00000489206 E4F1Q66K89 784 aaPredicted RBP22.4■■□□□ 1.18
SYNGR1-207ENST00000489206 SPATA20Q8TB22 786 aa22.4■■□□□ 1.18
SYNGR1-207ENST00000489206 ENOX1Q8TC92 643 aaKnown RBP22.4■■□□□ 1.18
SYNGR1-207ENST00000489206 FOXN1O15353 648 aa22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 NCBP1Q09161 790 aaKnown RBP22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 NBPF5PQ86XG9 351 aaPredicted RBP22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 ZNF592Q92610 1267 aa22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 SHISA4Q96DD7 197 aa22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 CSRNP2Q9H175 543 aa22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 DCP1AQ9NPI6 582 aaPredicted RBP22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 FANCLQ9NW38 375 aa22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 TRMT1Q9NXH9 659 aaKnown RBP22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 CNTNAP5Q8WYK1 1306 aa22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 SBF2Q86WG5 1849 aa22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 TAF1LQ8IZX4 1826 aa22.39■■□□□ 1.18
SYNGR1-207ENST00000489206 PLEKHA8P1O95397 391 aa22.39■■□□□ 1.17
SYNGR1-207ENST00000489206 CTCFLQ8NI51 663 aaPredicted RBP22.39■■□□□ 1.17
SYNGR1-207ENST00000489206 V9GY48 417 aaPredicted RBP22.39■■□□□ 1.17
SYNGR1-207ENST00000489206 SMIM22K7EJ46 135 aa22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 PDE4BQ07343 736 aa22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 VPS72Q15906 364 aa22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 FAM98CQ17RN3 349 aaKnown RBP22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 SPTY2D1Q68D10 685 aaPredicted RBP22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 TPTE2Q6XPS3 522 aa22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 DPF2Q92785 391 aa22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 PPP1R13BQ96KQ4 1090 aa22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 ZPR1O75312 459 aa22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 FCHSD1Q86WN1 690 aa22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 TNFRSF25Q93038 417 aa22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 EP400Q96L91 3159 aa22.38■■□□□ 1.17
SYNGR1-207ENST00000489206 PRDM1O75626 825 aa22.37■■□□□ 1.17
SYNGR1-207ENST00000489206 PRR29P0C7W0 189 aa22.37■■□□□ 1.17
SYNGR1-207ENST00000489206 TOP1P11387 765 aaKnown RBP22.37■■□□□ 1.17
SYNGR1-207ENST00000489206 ERCC5P28715 1186 aaPredicted RBP22.37■■□□□ 1.17
SYNGR1-207ENST00000489206 TMX1Q9H3N1 280 aa22.37■■□□□ 1.17
SYNGR1-207ENST00000489206 LY75O60449 1722 aa22.36■■□□□ 1.17
SYNGR1-207ENST00000489206 ZNF18P17022 549 aa22.36■■□□□ 1.17
SYNGR1-207ENST00000489206 ATP2B1P20020 1258 aa22.36■■□□□ 1.17
SYNGR1-207ENST00000489206 KLRK1P26718 216 aa22.36■■□□□ 1.17
SYNGR1-207ENST00000489206 TRAPPC10P48553 1259 aa22.36■■□□□ 1.17
SYNGR1-207ENST00000489206 PLCD1P51178 756 aa22.36■■□□□ 1.17
SYNGR1-207ENST00000489206 TNRC6CQ9HCJ0 1690 aaKnown RBP22.35■■□□□ 1.17
SYNGR1-207ENST00000489206 SLFN14P0C7P3 912 aa22.35■■□□□ 1.17
SYNGR1-207ENST00000489206 SH3RF1Q7Z6J0 888 aa22.35■■□□□ 1.17
SYNGR1-207ENST00000489206 TRPC5Q9UL62 973 aaPredicted RBP22.35■■□□□ 1.17
SYNGR1-207ENST00000489206 IRS2Q9Y4H2 1338 aa22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 NAV1Q8NEY1 1877 aa22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 NPY5RQ15761 445 aa22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 PYM1Q9BRP8 204 aaKnown RBP22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 TFCP2L1Q9NZI6 479 aa22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 CGNQ9P2M7 1197 aaKnown RBP22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 NFE2L3Q9Y4A8 694 aa22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 FAM205CA6NFA0 338 aa22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 SCG2P13521 617 aa22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 PRDX5P30044 214 aa22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 TTC38Q5R3I4 469 aa22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 PDILTQ8N807 584 aa22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 ERO1AQ96HE7 468 aa22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 SRP68Q9UHB9 627 aaKnown RBP22.34■■□□□ 1.17
SYNGR1-207ENST00000489206 THSD7AQ9UPZ6 1657 aa22.33■■□□□ 1.17
SYNGR1-207ENST00000489206 KIF5BP33176 963 aa22.33■■□□□ 1.17
SYNGR1-207ENST00000489206 ATP2C1P98194 919 aaPredicted RBP22.33■■□□□ 1.17
SYNGR1-207ENST00000489206 TBX2Q13207 712 aaPredicted RBP22.33■■□□□ 1.17
SYNGR1-207ENST00000489206 EARS2Q5JPH6 523 aaKnown RBP22.33■■□□□ 1.17
SYNGR1-207ENST00000489206 USP49Q70CQ1 688 aa22.33■■□□□ 1.17
SYNGR1-207ENST00000489206 SRBD1Q8N5C6 995 aaKnown RBP22.33■■□□□ 1.17
SYNGR1-207ENST00000489206 GNPATO15228 680 aa22.32■■□□□ 1.16
SYNGR1-207ENST00000489206 RXRBP28702 533 aa22.32■■□□□ 1.16
SYNGR1-207ENST00000489206 FMR1Q06787 632 aaKnown RBP eCLIP22.32■■□□□ 1.16
SYNGR1-207ENST00000489206 PFKFB3Q16875 520 aaPredicted RBP22.32■■□□□ 1.16
SYNGR1-207ENST00000489206 CCDC178Q5BJE1 867 aa22.32■■□□□ 1.16
SYNGR1-207ENST00000489206 PPP4R3BQ5MIZ7 849 aa22.32■■□□□ 1.16
SYNGR1-207ENST00000489206 DZIP1Q86YF9 867 aaKnown RBP22.32■■□□□ 1.16
SYNGR1-207ENST00000489206 BCL11BQ9C0K0 894 aaPredicted RBP22.32■■□□□ 1.16
SYNGR1-207ENST00000489206 INTS13Q9NVM9 706 aa22.32■■□□□ 1.16
SYNGR1-207ENST00000489206 RTCBQ9Y3I0 505 aaKnown RBP22.32■■□□□ 1.16
SYNGR1-207ENST00000489206 ROBO3Q96MS0 1386 aa22.32■■□□□ 1.16
SYNGR1-207ENST00000489206 CDK11BP21127 795 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms