RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 USP17L19D6RCP7 530 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 USP17L20D6RJB6 530 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 MSCO60682 206 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 PLCG2P16885 1265 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 CYP2C19P33261 490 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 USP17L24Q0WX57 530 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 ZYXQ15942 572 aaKnown RBP19.9■□□□□ 0.78
USP48-210ENST00000489108 GJC2Q5T442 439 aaPredicted RBP19.9■□□□□ 0.78
USP48-210ENST00000489108 TRPV1Q8NER1 839 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 SNRKQ9NRH2 765 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 GH2P01242 217 aa19.89■□□□□ 0.77
USP48-210ENST00000489108 UQCRFS1P1P0C7P4 283 aa19.89■□□□□ 0.77
USP48-210ENST00000489108 ADGRA1Q86SQ6 560 aa19.89■□□□□ 0.77
USP48-210ENST00000489108 API5Q9BZZ5 524 aaKnown RBP19.89■□□□□ 0.77
USP48-210ENST00000489108 TTYH1Q9H313 450 aaPredicted RBP19.89■□□□□ 0.77
USP48-210ENST00000489108 RLFQ13129 1914 aa19.88■□□□□ 0.77
USP48-210ENST00000489108 SPTBN5Q9NRC6 3674 aaKnown RBP19.88■□□□□ 0.77
USP48-210ENST00000489108 HOXC6P09630 235 aa19.88■□□□□ 0.77
USP48-210ENST00000489108 SLC39A5Q6ZMH5 540 aa19.88■□□□□ 0.77
USP48-210ENST00000489108 CATSPERGQ6ZRH7 1159 aa19.88■□□□□ 0.77
USP48-210ENST00000489108 BADQ92934 168 aa19.88■□□□□ 0.77
USP48-210ENST00000489108 CDCA7LQ96GN5 454 aa19.88■□□□□ 0.77
USP48-210ENST00000489108 C12orf42Q96LP6 360 aa19.88■□□□□ 0.77
USP48-210ENST00000489108 BTBD7Q9P203 1132 aa19.88■□□□□ 0.77
USP48-210ENST00000489108 IVNS1ABPQ9Y6Y0 642 aa19.88■□□□□ 0.77
USP48-210ENST00000489108 MTX1Q13505 466 aa19.87■□□□□ 0.77
USP48-210ENST00000489108 GRB14Q14449 540 aa19.87■□□□□ 0.77
USP48-210ENST00000489108 ARRDC4Q8NCT1 418 aa19.87■□□□□ 0.77
USP48-210ENST00000489108 PRDM5Q9NQX1 630 aaPredicted RBP19.87■□□□□ 0.77
USP48-210ENST00000489108 FOCADQ5VW36 1801 aa19.87■□□□□ 0.77
USP48-210ENST00000489108 IGHA2P01877 340 aa19.86■□□□□ 0.77
USP48-210ENST00000489108 HLA-DOAP06340 250 aa19.86■□□□□ 0.77
USP48-210ENST00000489108 SMAD3P84022 425 aaKnown RBP19.86■□□□□ 0.77
USP48-210ENST00000489108 ANO1Q5XXA6 986 aa19.86■□□□□ 0.77
USP48-210ENST00000489108 FEZ1Q99689 392 aa19.86■□□□□ 0.77
USP48-210ENST00000489108 GNAI3P08754 354 aa19.85■□□□□ 0.77
USP48-210ENST00000489108 CYBAP13498 195 aa19.85■□□□□ 0.77
USP48-210ENST00000489108 DYNLL1P63167 89 aaKnown RBP19.85■□□□□ 0.77
USP48-210ENST00000489108 G3BP1Q13283 466 aaKnown RBP eCLIP19.85■□□□□ 0.77
USP48-210ENST00000489108 TRIM60Q495X7 471 aa19.85■□□□□ 0.77
USP48-210ENST00000489108 ATF7IPQ6VMQ6 1270 aa19.85■□□□□ 0.77
USP48-210ENST00000489108 SH3RF1Q7Z6J0 888 aa19.85■□□□□ 0.77
USP48-210ENST00000489108 MYO5AQ9Y4I1 1855 aaKnown RBP19.85■□□□□ 0.77
USP48-210ENST00000489108 MYCNP04198 464 aaPredicted RBP19.84■□□□□ 0.77
USP48-210ENST00000489108 CYP2E1P05181 493 aaPredicted RBP19.84■□□□□ 0.77
USP48-210ENST00000489108 FOSL2P15408 326 aa19.84■□□□□ 0.77
USP48-210ENST00000489108 RAB3GAP1Q15042 981 aa19.84■□□□□ 0.77
USP48-210ENST00000489108 LBX2Q6XYB7 198 aa19.84■□□□□ 0.77
USP48-210ENST00000489108 DPP9Q86TI2 863 aa19.84■□□□□ 0.77
USP48-210ENST00000489108 ACER1Q8TDN7 264 aa19.84■□□□□ 0.77
USP48-210ENST00000489108 TRIM43BA6NCK2 446 aa19.83■□□□□ 0.77
USP48-210ENST00000489108 KBTBD13C9JR72 458 aa19.83■□□□□ 0.77
USP48-210ENST00000489108 VCAM1P19320 739 aa19.83■□□□□ 0.77
USP48-210ENST00000489108 USP14P54578 494 aa19.83■□□□□ 0.77
USP48-210ENST00000489108 TTC39AQ5SRH9 613 aa19.83■□□□□ 0.77
USP48-210ENST00000489108 TATDN1Q6P1N9 297 aa19.83■□□□□ 0.77
USP48-210ENST00000489108 SYMPKQ92797 1274 aaKnown RBP19.83■□□□□ 0.77
USP48-210ENST00000489108 TRIM43Q96BQ3 446 aaPredicted RBP19.83■□□□□ 0.77
USP48-210ENST00000489108 KIAA1683Q9H0B3 1180 aa19.83■□□□□ 0.77
USP48-210ENST00000489108 CDH23Q9H251 3354 aa19.83■□□□□ 0.76
USP48-210ENST00000489108 MYH1P12882 1939 aa19.82■□□□□ 0.76
USP48-210ENST00000489108 SPDYE16A6NNV3 312 aaPredicted RBP19.82■□□□□ 0.76
USP48-210ENST00000489108 ADCYAP1R1P41586 468 aa19.82■□□□□ 0.76
USP48-210ENST00000489108 SNX17Q15036 470 aa19.82■□□□□ 0.76
USP48-210ENST00000489108 PDLIM7Q9NR12 457 aa19.82■□□□□ 0.76
USP48-210ENST00000489108 PNMA6EA0A0J9YXQ4 647 aa19.81■□□□□ 0.76
USP48-210ENST00000489108 PRAMEF19Q5SWL8 479 aa19.81■□□□□ 0.76
USP48-210ENST00000489108 TRMT2AQ8IZ69 625 aaKnown RBP19.81■□□□□ 0.76
USP48-210ENST00000489108 FERMT2Q96AC1 680 aa19.81■□□□□ 0.76
USP48-210ENST00000489108 DBNDD2Q9BQY9 259 aa19.81■□□□□ 0.76
USP48-210ENST00000489108 RPAP3Q9H6T3 665 aaPredicted RBP19.81■□□□□ 0.76
USP48-210ENST00000489108 PIH1D3Q9NQM4 214 aaKnown RBP19.81■□□□□ 0.76
USP48-210ENST00000489108 SEPT4O43236 478 aa19.8■□□□□ 0.76
USP48-210ENST00000489108 CYP7A1P22680 504 aa19.8■□□□□ 0.76
USP48-210ENST00000489108 ADORA2AP29274 412 aa19.8■□□□□ 0.76
USP48-210ENST00000489108 ZAP70P43403 619 aa19.8■□□□□ 0.76
USP48-210ENST00000489108 ABCB5Q2M3G0 1257 aa19.8■□□□□ 0.76
USP48-210ENST00000489108 CERKLQ49MI3 558 aaPredicted RBP19.8■□□□□ 0.76
USP48-210ENST00000489108 CCDC158Q5M9N0 1113 aa19.8■□□□□ 0.76
USP48-210ENST00000489108 OLFML2BQ68BL8 750 aa19.8■□□□□ 0.76
USP48-210ENST00000489108 MOV10L1Q9BXT6 1211 aaKnown RBP19.8■□□□□ 0.76
USP48-210ENST00000489108 SERPINB13Q9UIV8 391 aa19.8■□□□□ 0.76
USP48-210ENST00000489108 TTC28Q96AY4 2481 aa19.8■□□□□ 0.76
USP48-210ENST00000489108 STRNO43815 780 aa19.79■□□□□ 0.76
USP48-210ENST00000489108 COBLO75128 1261 aa19.79■□□□□ 0.76
USP48-210ENST00000489108 ITGB8P26012 769 aa19.79■□□□□ 0.76
USP48-210ENST00000489108 USP5P45974 858 aa19.79■□□□□ 0.76
USP48-210ENST00000489108 TLE2Q04725 743 aa19.79■□□□□ 0.76
USP48-210ENST00000489108 LRRC41Q15345 812 aa19.79■□□□□ 0.76
USP48-210ENST00000489108 SMCHD1A6NHR9 2005 aa19.78■□□□□ 0.76
USP48-210ENST00000489108 GNAI2P04899 355 aa19.78■□□□□ 0.76
USP48-210ENST00000489108 CT47B1P0C2W7 299 aaPredicted RBP19.78■□□□□ 0.76
USP48-210ENST00000489108 EPHB4P54760 987 aa19.78■□□□□ 0.76
USP48-210ENST00000489108 TNNI3KQ59H18 835 aa19.78■□□□□ 0.76
USP48-210ENST00000489108 MIGA1Q8NAN2 632 aa19.78■□□□□ 0.76
USP48-210ENST00000489108 CABP5Q9NP86 173 aa19.78■□□□□ 0.76
USP48-210ENST00000489108 FPGT-TNNI3KV9GXZ4 949 aa19.78■□□□□ 0.76
USP48-210ENST00000489108 COL9A1P20849 921 aa19.77■□□□□ 0.76
USP48-210ENST00000489108 GUCY1A2P33402 732 aa19.77■□□□□ 0.76
USP48-210ENST00000489108 COG2Q14746 738 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms