RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 TTC9Q92623 222 aa6.64□□□□□ -1.35
SF3A3-207ENST00000488934 SEPT3Q9UH03 358 aa6.64□□□□□ -1.35
SF3A3-207ENST00000488934 NARFQ9UHQ1 456 aa6.64□□□□□ -1.35
SF3A3-207ENST00000488934 TSPYL4Q9UJ04 414 aa6.64□□□□□ -1.35
SF3A3-207ENST00000488934 NAGPAQ9UK23 515 aa6.64□□□□□ -1.35
SF3A3-207ENST00000488934 ZNF652Q9Y2D9 606 aa6.64□□□□□ -1.35
SF3A3-207ENST00000488934 ZBTB1Q9Y2K1 713 aa6.64□□□□□ -1.35
SF3A3-207ENST00000488934 GRIN3BO60391 1043 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 HOXD8P13378 290 aaPredicted RBP6.63□□□□□ -1.35
SF3A3-207ENST00000488934 EIF5P55010 431 aaKnown RBP6.63□□□□□ -1.35
SF3A3-207ENST00000488934 AFDNP55196 1824 aaKnown RBP6.63□□□□□ -1.35
SF3A3-207ENST00000488934 TGFB2P61812 414 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 MLLT1Q03111 559 aaPredicted RBP6.63□□□□□ -1.35
SF3A3-207ENST00000488934 GPR162Q16538 588 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 NOM1Q5C9Z4 860 aaKnown RBP6.63□□□□□ -1.35
SF3A3-207ENST00000488934 USPL1Q5W0Q7 1092 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 C8orf86Q6ZUL3 223 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 CCDC146Q8IYE0 955 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 DTWD1Q8N5C7 304 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 NGEFQ8N5V2 710 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 SPACA7Q96KW9 195 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 ARID3AQ99856 593 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 CHMP4AQ9BY43 222 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 MRS2Q9HD23 443 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 NRXN2Q9P2S2 1712 aa6.63□□□□□ -1.35
SF3A3-207ENST00000488934 BRCA1P38398 1863 aaKnown RBP6.62□□□□□ -1.35
SF3A3-207ENST00000488934 DLEC1Q9Y238 1755 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 C10orf71Q711Q0 1435 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 CARMIL3Q8ND23 1372 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 C1QTNF9BB2RNN3 333 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 MMP20O60882 483 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 ELNP15502 786 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 AFF1P51825 1210 aaKnown RBP6.62□□□□□ -1.35
SF3A3-207ENST00000488934 TRIP4Q15650 581 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-207ENST00000488934 PERM1Q5SV97 790 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 PDE12Q6L8Q7 609 aaKnown RBP6.62□□□□□ -1.35
SF3A3-207ENST00000488934 CLEC4GQ6UXB4 293 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 WFDC8Q8IUA0 241 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 CACTIN-AS1Q8N1I8 211 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 GTF3C2Q8WUA4 911 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-207ENST00000488934 LPIN3Q9BQK8 851 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 ARFGEF1Q9Y6D6 1849 aa6.62□□□□□ -1.35
SF3A3-207ENST00000488934 N4BP2Q86UW6 1770 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-207ENST00000488934 C9orf172C9J069 976 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 NPHP1O15259 732 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 KCNQ3O43525 872 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 FAM13AO94988 1023 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 PROCP04070 461 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 HOXB7P09629 217 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 GATA4P43694 442 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 EIF4A1P60842 406 aaKnown RBP6.61□□□□□ -1.35
SF3A3-207ENST00000488934 HYAL2Q12891 473 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 AAMPQ13685 434 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 COL9A3Q14050 684 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-207ENST00000488934 KIF6Q6ZMV9 814 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 SMIM5Q71RC9 77 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 CD163Q86VB7 1156 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 OR13H1Q8NG92 308 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 THUMPD2Q9BTF0 503 aaKnown RBP6.61□□□□□ -1.35
SF3A3-207ENST00000488934 SMG9Q9H0W8 520 aaKnown RBP6.61□□□□□ -1.35
SF3A3-207ENST00000488934 ABI2Q9NYB9 513 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-207ENST00000488934 SRP68Q9UHB9 627 aaKnown RBP6.61□□□□□ -1.35
SF3A3-207ENST00000488934 RRP7AQ9Y3A4 280 aaKnown RBP6.61□□□□□ -1.35
SF3A3-207ENST00000488934 USP16Q9Y5T5 823 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 NUP98P52948 1817 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 KIAA1551Q9HCM1 1747 aa6.61□□□□□ -1.35
SF3A3-207ENST00000488934 CACNA1FO60840 1977 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 PXDNLA1KZ92 1463 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 A0A0A0MRY4 1105 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 FAM177BA6PVY3 158 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 ZBTB42B2RXF5 422 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 POLRMTO00411 1230 aaKnown RBP6.6□□□□□ -1.35
SF3A3-207ENST00000488934 CHL1O00533 1208 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 APAF1O14727 1248 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 A1BGP04217 495 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 TM4SF1P30408 202 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 SCNN1AP37088 669 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 USP5P45974 858 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 GNAI1P63096 354 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 NRG1Q02297 640 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-207ENST00000488934 CCDC27Q2M243 656 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 HFE2Q6ZVN8 426 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 ZNF438Q7Z4V0 828 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 DMRTC2Q8IXT2 367 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-207ENST00000488934 NLGN2Q8NFZ4 835 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 PLD4Q96BZ4 506 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 NSUN5Q96P11 429 aaKnown RBP6.6□□□□□ -1.35
SF3A3-207ENST00000488934 SETDB2Q96T68 719 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 IFT57Q9NWB7 429 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 MIS18AQ9NYP9 233 aa6.6□□□□□ -1.35
SF3A3-207ENST00000488934 LAS1LQ9Y4W2 734 aaKnown RBP6.6□□□□□ -1.35
SF3A3-207ENST00000488934 ANKRD36CQ5JPF3 1778 aa6.59□□□□□ -1.35
SF3A3-207ENST00000488934 ERVV-1B6SEH8 477 aa6.59□□□□□ -1.35
SF3A3-207ENST00000488934 FAM229AH3BQW9 127 aa6.59□□□□□ -1.35
SF3A3-207ENST00000488934 ZBTB39O15060 712 aa6.59□□□□□ -1.35
SF3A3-207ENST00000488934 ITGB2P05107 769 aa6.59□□□□□ -1.35
SF3A3-207ENST00000488934 SERPINB2P05120 415 aa6.59□□□□□ -1.35
SF3A3-207ENST00000488934 YY1P25490 414 aa6.59□□□□□ -1.35
SF3A3-207ENST00000488934 MZF1P28698 734 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-207ENST00000488934 CHRNA4P43681 627 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms