RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 SLC5A4Q9NY91 659 aa7.98□□□□□ -1.13
PTCH1-211ENST00000488809 NAV1Q8NEY1 1877 aa7.98□□□□□ -1.13
PTCH1-211ENST00000488809 TMEM265A0A087WTH1 108 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 HOXC6P09630 235 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 PTPREP23469 700 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 MCAMP43121 646 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 RTP1P59025 263 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 PPP4CP60510 307 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 SMAD3P84022 425 aaKnown RBP7.97□□□□□ -1.13
PTCH1-211ENST00000488809 SLFN5Q08AF3 891 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 MTX1Q13505 466 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 TTC39AQ5SRH9 613 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 PI16Q6UXB8 463 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 DPP9Q86TI2 863 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 CDX2Q99626 313 aaPredicted RBP7.97□□□□□ -1.13
PTCH1-211ENST00000488809 MEIS3Q99687 375 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 CABP5Q9NP86 173 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 PRDM5Q9NQX1 630 aaPredicted RBP7.97□□□□□ -1.13
PTCH1-211ENST00000488809 NOB1Q9ULX3 412 aaKnown RBP7.97□□□□□ -1.13
PTCH1-211ENST00000488809 ATP11BQ9Y2G3 1177 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 VCANP13611 3396 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 PRUNE2Q8WUY3 3088 aa7.97□□□□□ -1.13
PTCH1-211ENST00000488809 A0A0G2JMZ2 1700 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 GH2P01242 217 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 FOSL2P15408 326 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 USP5P45974 858 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 GRB14Q14449 540 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 ZYXQ15942 572 aaKnown RBP7.96□□□□□ -1.14
PTCH1-211ENST00000488809 TMED8Q6PL24 325 aaPredicted RBP7.96□□□□□ -1.14
PTCH1-211ENST00000488809 LBX2Q6XYB7 198 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 TTC6Q86TZ1 520 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 SEMA6BQ9H3T3 888 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 DNAJC18Q9H819 358 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 PRDM6Q9NQX0 595 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 EMILIN3Q9NT22 766 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 PALD1Q9ULE6 856 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 SMCHD1A6NHR9 2005 aa7.96□□□□□ -1.14
PTCH1-211ENST00000488809 COL11A1P12107 1806 aaPredicted RBP7.95□□□□□ -1.14
PTCH1-211ENST00000488809 PARP14Q460N5 1801 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 SEPT4O43236 478 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 STRNO43815 780 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 PEX10O60683 326 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 GNAI2P04899 355 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 VCAM1P19320 739 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 RAB3GAP1Q15042 981 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 SHHQ15465 462 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 ABCB5Q2M3G0 1257 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 CERKLQ49MI3 558 aaPredicted RBP7.95□□□□□ -1.14
PTCH1-211ENST00000488809 OLFML2BQ68BL8 750 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 SLC39A5Q6ZMH5 540 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 CATSPERGQ6ZRH7 1159 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 ARHGAP45Q92619 1136 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 KIAA1683Q9H0B3 1180 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 EHD4Q9H223 541 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 GPR108Q9NPR9 543 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 SAP30BPQ9UHR5 308 aaKnown RBP7.95□□□□□ -1.14
PTCH1-211ENST00000488809 SERPINB13Q9UIV8 391 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 NDUFB9Q9Y6M9 179 aa7.95□□□□□ -1.14
PTCH1-211ENST00000488809 SPTBN5Q9NRC6 3674 aaKnown RBP7.94□□□□□ -1.14
PTCH1-211ENST00000488809 MYO9BQ13459 2157 aa7.94□□□□□ -1.14
PTCH1-211ENST00000488809 IPO8O15397 1037 aaKnown RBP7.94□□□□□ -1.14
PTCH1-211ENST00000488809 CNMDO75829 334 aa7.94□□□□□ -1.14
PTCH1-211ENST00000488809 MYCNP04198 464 aaPredicted RBP7.94□□□□□ -1.14
PTCH1-211ENST00000488809 CYBAP13498 195 aa7.94□□□□□ -1.14
PTCH1-211ENST00000488809 CYP2C19P33261 490 aa7.94□□□□□ -1.14
PTCH1-211ENST00000488809 OS9Q13438 667 aaPredicted RBP7.94□□□□□ -1.14
PTCH1-211ENST00000488809 SNX17Q15036 470 aa7.94□□□□□ -1.14
PTCH1-211ENST00000488809 GJC2Q5T442 439 aaPredicted RBP7.94□□□□□ -1.14
PTCH1-211ENST00000488809 C1orf53Q5VUE5 145 aa7.94□□□□□ -1.14
PTCH1-211ENST00000488809 TATDN1Q6P1N9 297 aa7.94□□□□□ -1.14
PTCH1-211ENST00000488809 MYLIPQ8WY64 445 aa7.94□□□□□ -1.14
PTCH1-211ENST00000488809 BADQ92934 168 aa7.94□□□□□ -1.14
PTCH1-211ENST00000488809 RNPC3Q96LT9 517 aaKnown RBP7.94□□□□□ -1.14
PTCH1-211ENST00000488809 RPAP3Q9H6T3 665 aaPredicted RBP7.94□□□□□ -1.14
PTCH1-211ENST00000488809 HOXC10Q9NYD6 342 aa7.94□□□□□ -1.14
PTCH1-211ENST00000488809 FLRT1Q9NZU1 646 aa7.94□□□□□ -1.14
PTCH1-211ENST00000488809 CDH23Q9H251 3354 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 SPDYE16A6NNV3 312 aaPredicted RBP7.93□□□□□ -1.14
PTCH1-211ENST00000488809 CYP7A1P22680 504 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 ADORA2AP29274 412 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 JAG1P78504 1218 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 COG2Q14746 738 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 TRIM60Q495X7 471 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 TNNI3KQ59H18 835 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 TJAP1Q5JTD0 557 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 C9orf50Q5SZB4 431 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 RNF180Q86T96 592 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 MB21D1Q8N884 522 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 SHCBP1Q8NEM2 672 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 NPLOC4Q8TAT6 608 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 ZNF512BQ96KM6 892 aaPredicted RBP7.93□□□□□ -1.14
PTCH1-211ENST00000488809 TANGO6Q9C0B7 1094 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 MROH8Q9H579 483 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 PDLIM7Q9NR12 457 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 SNRKQ9NRH2 765 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 TACC3Q9Y6A5 838 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 FPGT-TNNI3KV9GXZ4 949 aa7.93□□□□□ -1.14
PTCH1-211ENST00000488809 IDH1O75874 414 aaKnown RBP7.92□□□□□ -1.14
PTCH1-211ENST00000488809 CYP2E1P05181 493 aaPredicted RBP7.92□□□□□ -1.14
PTCH1-211ENST00000488809 POLR3DP05423 398 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms