RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 SEPT2Q15019 361 aa20.2■□□□□ 0.82
CDK5RAP1-214ENST00000488723 PRRT2Q7Z6L0 340 aaPredicted RBP20.2■□□□□ 0.82
CDK5RAP1-214ENST00000488723 ESR2Q92731 530 aa20.2■□□□□ 0.82
CDK5RAP1-214ENST00000488723 SH2D4AQ9H788 454 aa20.2■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TCP11L1Q9NUJ3 509 aa20.2■□□□□ 0.82
CDK5RAP1-214ENST00000488723 IGKV6D-41A0A0C4DH26 115 aa20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 USP14P54578 494 aa20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TFAP4Q01664 338 aa20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TSGA10IPQ3SY00 556 aa20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 CCDC178Q5BJE1 867 aa20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TBC1D10CQ8IV04 446 aa20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 STK11IPQ8N1F8 1099 aa20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 PROCA1Q8NCQ7 364 aaPredicted RBP20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 KIAA1683Q9H0B3 1180 aa20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 NYAP2Q9P242 653 aa20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TACC3Q9Y6A5 838 aa20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 GREB1LQ9C091 1923 aaPredicted RBP20.19■□□□□ 0.82
CDK5RAP1-214ENST00000488723 CCL15-CCL14A0A0B4J2E2 113 aa20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TSPY2A6NKD2 308 aa20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 CA12O43570 354 aa20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 RANBP6O60518 1105 aaKnown RBP20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 ICA1Q05084 483 aa20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TRDNQ13061 729 aa20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 MKRN3Q13064 507 aaKnown RBP20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 CCL15Q16663 113 aa20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 SHROOM1Q2M3G4 852 aaPredicted RBP20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 MKL1Q969V6 931 aa20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 ZIC5Q96T25 663 aa20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 ARHGEF10LQ9HCE6 1279 aa20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 MTMR4Q9NYA4 1195 aa20.18■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TRIM75PA6NK02 468 aa20.17■□□□□ 0.82
CDK5RAP1-214ENST00000488723 NOVP48745 357 aa20.17■□□□□ 0.82
CDK5RAP1-214ENST00000488723 CREB3L3Q68CJ9 461 aa20.17■□□□□ 0.82
CDK5RAP1-214ENST00000488723 USP17L2Q6R6M4 530 aa20.17■□□□□ 0.82
CDK5RAP1-214ENST00000488723 SIAH1Q8IUQ4 282 aa20.17■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TTC14Q96N46 770 aa20.17■□□□□ 0.82
CDK5RAP1-214ENST00000488723 INCENPQ9NQS7 918 aa20.17■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TOMM22Q9NS69 142 aa20.17■□□□□ 0.82
CDK5RAP1-214ENST00000488723 SLC45A1Q9Y2W3 748 aa20.17■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TMX2Q9Y320 296 aa20.17■□□□□ 0.82
CDK5RAP1-214ENST00000488723 PTPRFP10586 1907 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 SLC27A2O14975 620 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 ZKSCAN1P17029 563 aaPredicted RBP20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 MOGSQ13724 837 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 FAM47AQ5JRC9 791 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 ANKRD23Q86SG2 305 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 IFNL1Q8IU54 200 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 BRI3BPQ8WY22 251 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 KCNB2Q92953 911 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 C12orf42Q96LP6 360 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 WBP1LQ9NX94 342 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 SAGE1Q9NXZ1 904 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TMOD4Q9NZQ9 345 aa20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.16■□□□□ 0.82
CDK5RAP1-214ENST00000488723 E7EWF7 191 aa20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 TTLL1O95922 423 aa20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 EEF2P13639 858 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 HSPA4P34932 840 aa20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 RRP12Q5JTH9 1297 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 CCDC84Q86UT8 332 aaPredicted RBP20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 IQCA1Q86XH1 822 aa20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 NCOA7Q8NI08 942 aa20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 PTPN18Q99952 460 aa20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 BEGAINQ9BUH8 593 aa20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 CFHR5Q9BXR6 569 aa20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 USP26Q9BXU7 913 aa20.15■□□□□ 0.82
CDK5RAP1-214ENST00000488723 NEDD4P46934 1319 aa20.14■□□□□ 0.81
CDK5RAP1-214ENST00000488723 PABPC4Q13310 644 aaKnown RBP eCLIP20.14■□□□□ 0.81
CDK5RAP1-214ENST00000488723 MTMR2Q13614 643 aa20.14■□□□□ 0.81
CDK5RAP1-214ENST00000488723 KRT32Q14532 448 aa20.14■□□□□ 0.81
CDK5RAP1-214ENST00000488723 ACER1Q8TDN7 264 aa20.14■□□□□ 0.81
CDK5RAP1-214ENST00000488723 LPAR1Q92633 364 aa20.14■□□□□ 0.81
CDK5RAP1-214ENST00000488723 CEP95Q96GE4 821 aa20.14■□□□□ 0.81
CDK5RAP1-214ENST00000488723 FEZ1Q99689 392 aa20.14■□□□□ 0.81
CDK5RAP1-214ENST00000488723 MTA3Q9BTC8 594 aa20.14■□□□□ 0.81
CDK5RAP1-214ENST00000488723 IL17RBQ9NRM6 502 aa20.14■□□□□ 0.81
CDK5RAP1-214ENST00000488723 A0A1W2PRG0 241 aa20.13■□□□□ 0.81
CDK5RAP1-214ENST00000488723 KDM4AO75164 1064 aa20.13■□□□□ 0.81
CDK5RAP1-214ENST00000488723 HMGCS2P54868 508 aa20.13■□□□□ 0.81
CDK5RAP1-214ENST00000488723 RALYLQ86SE5 291 aaKnown RBP20.13■□□□□ 0.81
CDK5RAP1-214ENST00000488723 DGKHQ86XP1 1220 aa20.13■□□□□ 0.81
CDK5RAP1-214ENST00000488723 ANKS1AQ92625 1134 aa20.13■□□□□ 0.81
CDK5RAP1-214ENST00000488723 EMILIN3Q9NT22 766 aa20.13■□□□□ 0.81
CDK5RAP1-214ENST00000488723 ZSWIM5Q9P217 1185 aa20.13■□□□□ 0.81
CDK5RAP1-214ENST00000488723 AGTPBP1Q9UPW5 1226 aa20.13■□□□□ 0.81
CDK5RAP1-214ENST00000488723 B4E1Z4 1266 aa20.12■□□□□ 0.81
CDK5RAP1-214ENST00000488723 BTBD19C9JJ37 291 aa20.12■□□□□ 0.81
CDK5RAP1-214ENST00000488723 IGF2BP3O00425 579 aaKnown RBP eCLIP20.12■□□□□ 0.81
CDK5RAP1-214ENST00000488723 HOXA7P31268 230 aaPredicted RBP20.12■□□□□ 0.81
CDK5RAP1-214ENST00000488723 GPAT2Q6NUI2 795 aa20.12■□□□□ 0.81
CDK5RAP1-214ENST00000488723 VCPKMTQ9H867 229 aa20.12■□□□□ 0.81
CDK5RAP1-214ENST00000488723 GOPCQ9HD26 462 aa20.12■□□□□ 0.81
CDK5RAP1-214ENST00000488723 CLIP2Q9UDT6 1046 aa20.12■□□□□ 0.81
CDK5RAP1-214ENST00000488723 MCCP23508 829 aa20.11■□□□□ 0.81
CDK5RAP1-214ENST00000488723 RNF186Q9NXI6 227 aa20.11■□□□□ 0.81
CDK5RAP1-214ENST00000488723 PDHXO00330 501 aa20.1■□□□□ 0.81
CDK5RAP1-214ENST00000488723 HMGB1P09429 215 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP1-214ENST00000488723 C8orf34Q49A92 452 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms