RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 RGS19P49795 217 aa19.09■□□□□ 0.65
ERGIC3-216ENST00000488384 ALX1Q15699 326 aa19.09■□□□□ 0.65
ERGIC3-216ENST00000488384 CLEC10AQ8IUN9 316 aa19.09■□□□□ 0.65
ERGIC3-216ENST00000488384 ACER1Q8TDN7 264 aa19.09■□□□□ 0.65
ERGIC3-216ENST00000488384 CCDC17Q96LX7 622 aa19.09■□□□□ 0.65
ERGIC3-216ENST00000488384 PARK7Q99497 189 aaKnown RBP19.09■□□□□ 0.65
ERGIC3-216ENST00000488384 IL25Q9H293 177 aa19.09■□□□□ 0.65
ERGIC3-216ENST00000488384 SLC45A1Q9Y2W3 748 aa19.09■□□□□ 0.65
ERGIC3-216ENST00000488384 TLR2O60603 784 aa19.08■□□□□ 0.64
ERGIC3-216ENST00000488384 FKTNO75072 461 aa19.08■□□□□ 0.64
ERGIC3-216ENST00000488384 RASA1P20936 1047 aa19.08■□□□□ 0.64
ERGIC3-216ENST00000488384 FEZ1Q99689 392 aa19.08■□□□□ 0.64
ERGIC3-216ENST00000488384 LAMA4Q16363 1823 aa19.07■□□□□ 0.64
ERGIC3-216ENST00000488384 C19orf81C9J6K1 198 aa19.07■□□□□ 0.64
ERGIC3-216ENST00000488384 CYP2C8P10632 490 aa19.07■□□□□ 0.64
ERGIC3-216ENST00000488384 MFAP1P55081 439 aaKnown RBP19.07■□□□□ 0.64
ERGIC3-216ENST00000488384 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.07■□□□□ 0.64
ERGIC3-216ENST00000488384 KIAA1683Q9H0B3 1180 aa19.07■□□□□ 0.64
ERGIC3-216ENST00000488384 EMILIN3Q9NT22 766 aa19.07■□□□□ 0.64
ERGIC3-216ENST00000488384 TNRC18O15417 2968 aaPredicted RBP19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 RAD50Q92878 1312 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 A0A1W2PRG0 241 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 PRDM1O75626 825 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 FGAP02671 866 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 CHMLP26374 656 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 ICA1Q05084 483 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 ERICH6BQ5W0A0 696 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 USP17L2Q6R6M4 530 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 CTU1Q7Z7A3 348 aaKnown RBP19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 C12orf42Q96LP6 360 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 MKNK2Q9HBH9 465 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 TMOD4Q9NZQ9 345 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 HTTP42858 3142 aa19.06■□□□□ 0.64
ERGIC3-216ENST00000488384 ZSWIM8A7E2V4 1837 aa19.05■□□□□ 0.64
ERGIC3-216ENST00000488384 CTDSPL2Q05D32 466 aa19.05■□□□□ 0.64
ERGIC3-216ENST00000488384 ZYXQ15942 572 aaKnown RBP19.05■□□□□ 0.64
ERGIC3-216ENST00000488384 C17orf99Q6UX52 265 aa19.05■□□□□ 0.64
ERGIC3-216ENST00000488384 SIAH1Q8IUQ4 282 aa19.05■□□□□ 0.64
ERGIC3-216ENST00000488384 ANAPC4Q9UJX5 808 aa19.05■□□□□ 0.64
ERGIC3-216ENST00000488384 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.05■□□□□ 0.64
ERGIC3-216ENST00000488384 TACC3Q9Y6A5 838 aa19.05■□□□□ 0.64
ERGIC3-216ENST00000488384 PLIN4Q96Q06 1357 aa19.05■□□□□ 0.64
ERGIC3-216ENST00000488384 SLC3A2P08195 630 aaKnown RBP19.04■□□□□ 0.64
ERGIC3-216ENST00000488384 USP14P54578 494 aa19.04■□□□□ 0.64
ERGIC3-216ENST00000488384 CAP1Q01518 475 aa19.04■□□□□ 0.64
ERGIC3-216ENST00000488384 SP3Q02447 781 aa19.04■□□□□ 0.64
ERGIC3-216ENST00000488384 PDE4BQ07343 736 aa19.04■□□□□ 0.64
ERGIC3-216ENST00000488384 ZNF287Q9HBT7 754 aa19.04■□□□□ 0.64
ERGIC3-216ENST00000488384 PPP4R2Q9NY27 417 aa19.04■□□□□ 0.64
ERGIC3-216ENST00000488384 CPA4Q9UI42 421 aa19.04■□□□□ 0.64
ERGIC3-216ENST00000488384 PNMA3Q9UL41 463 aa19.04■□□□□ 0.64
ERGIC3-216ENST00000488384 IGKV6D-41A0A0C4DH26 115 aa19.03■□□□□ 0.64
ERGIC3-216ENST00000488384 BCRP11274 1271 aa19.03■□□□□ 0.64
ERGIC3-216ENST00000488384 VCAM1P19320 739 aa19.03■□□□□ 0.64
ERGIC3-216ENST00000488384 PABPC4Q13310 644 aaKnown RBP eCLIP19.03■□□□□ 0.643e-7■■■□□ 17.9
ERGIC3-216ENST00000488384 BMP2KLQ5H9B9 411 aa19.03■□□□□ 0.64
ERGIC3-216ENST00000488384 CD99L2Q8TCZ2 262 aa19.03■□□□□ 0.64
ERGIC3-216ENST00000488384 DSCC1Q9BVC3 393 aa19.03■□□□□ 0.64
ERGIC3-216ENST00000488384 NBPF3Q9H094 633 aa19.03■□□□□ 0.64
ERGIC3-216ENST00000488384 ASCC2Q9H1I8 757 aaPredicted RBP19.03■□□□□ 0.64
ERGIC3-216ENST00000488384 KANSL2Q9H9L4 492 aa19.03■□□□□ 0.64
ERGIC3-216ENST00000488384 EEF2P13639 858 aaKnown RBP19.02■□□□□ 0.64
ERGIC3-216ENST00000488384 HOXA7P31268 230 aaPredicted RBP19.02■□□□□ 0.64
ERGIC3-216ENST00000488384 SMCR8Q8TEV9 937 aaPredicted RBP19.02■□□□□ 0.64
ERGIC3-216ENST00000488384 ERO1AQ96HE7 468 aa19.02■□□□□ 0.64
ERGIC3-216ENST00000488384 ARHGEF10LQ9HCE6 1279 aa19.02■□□□□ 0.64
ERGIC3-216ENST00000488384 INCENPQ9NQS7 918 aa19.02■□□□□ 0.64
ERGIC3-216ENST00000488384 FGRP09769 529 aa19.01■□□□□ 0.63
ERGIC3-216ENST00000488384 OSBPP22059 807 aa19.01■□□□□ 0.63
ERGIC3-216ENST00000488384 HAND2P61296 217 aa19.01■□□□□ 0.63
ERGIC3-216ENST00000488384 KIAA1755Q5JYT7 1200 aa19.01■□□□□ 0.63
ERGIC3-216ENST00000488384 TBC1D10CQ8IV04 446 aa19.01■□□□□ 0.63
ERGIC3-216ENST00000488384 ZNF444Q8N0Y2 327 aaPredicted RBP19.01■□□□□ 0.63
ERGIC3-216ENST00000488384 TMX2Q9Y320 296 aa19.01■□□□□ 0.63
ERGIC3-216ENST00000488384 RBBP6Q7Z6E9 1792 aaKnown RBP19.01■□□□□ 0.63
ERGIC3-216ENST00000488384 SGSM2O43147 1006 aa19■□□□□ 0.63
ERGIC3-216ENST00000488384 ORC4O43929 436 aa19■□□□□ 0.63
ERGIC3-216ENST00000488384 IRX3P78415 501 aaPredicted RBP19■□□□□ 0.63
ERGIC3-216ENST00000488384 LACTBP83111 547 aaPredicted RBP19■□□□□ 0.63
ERGIC3-216ENST00000488384 FAM47AQ5JRC9 791 aa19■□□□□ 0.63
ERGIC3-216ENST00000488384 NEDD1Q8NHV4 660 aa19■□□□□ 0.63
ERGIC3-216ENST00000488384 RUFY2Q8WXA3 655 aa19■□□□□ 0.63
ERGIC3-216ENST00000488384 ARHGAP39Q9C0H5 1083 aa19■□□□□ 0.63
ERGIC3-216ENST00000488384 SH2D4AQ9H788 454 aa19■□□□□ 0.63
ERGIC3-216ENST00000488384 HPS5Q9UPZ3 1129 aa19■□□□□ 0.63
ERGIC3-216ENST00000488384 TSPY3P0CV98 308 aa18.99■□□□□ 0.63
ERGIC3-216ENST00000488384 TSPY8P0CW00 308 aa18.99■□□□□ 0.63
ERGIC3-216ENST00000488384 ATP2B2Q01814 1243 aa18.99■□□□□ 0.63
ERGIC3-216ENST00000488384 OTOP1Q7RTM1 612 aa18.99■□□□□ 0.63
ERGIC3-216ENST00000488384 CEP95Q96GE4 821 aa18.99■□□□□ 0.63
ERGIC3-216ENST00000488384 RPAP3Q9H6T3 665 aaPredicted RBP18.99■□□□□ 0.63
ERGIC3-216ENST00000488384 VCPKMTQ9H867 229 aa18.99■□□□□ 0.63
ERGIC3-216ENST00000488384 NYAP2Q9P242 653 aa18.99■□□□□ 0.63
ERGIC3-216ENST00000488384 MYH4Q9Y623 1939 aa18.98■□□□□ 0.63
ERGIC3-216ENST00000488384 CTGFP29279 349 aa18.98■□□□□ 0.63
ERGIC3-216ENST00000488384 SOX10P56693 466 aa18.98■□□□□ 0.63
ERGIC3-216ENST00000488384 HERVK_113P62684 666 aa18.98■□□□□ 0.63
ERGIC3-216ENST00000488384 TFAP4Q01664 338 aa18.98■□□□□ 0.63
ERGIC3-216ENST00000488384 STAG1Q8WVM7 1258 aa18.98■□□□□ 0.63
ERGIC3-216ENST00000488384 LPAR1Q92633 364 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms