RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 USP17L18D6R9N7 530 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 USP17L22D6RA61 530 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 USP17L17D6RBQ6 530 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 USP17L19D6RCP7 530 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 USP17L20D6RJB6 530 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 EVI5O60447 810 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 POLR3DP05423 398 aaPredicted RBP13.61□□□□□ -0.23
VAMP7-206ENST00000488344 RGS2P41220 211 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 FXR1P51114 621 aaKnown RBP eCLIP13.61□□□□□ -0.23
VAMP7-206ENST00000488344 ERVK-9P63128 1117 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 ERVK-24P63145 666 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 USP17L24Q0WX57 530 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 RAB3GAP1Q15042 981 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 ABCB5Q2M3G0 1257 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 SLC9C2Q5TAH2 1124 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 NECAB2Q7Z6G3 386 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 RIOK1Q9BRS2 568 aaKnown RBP13.61□□□□□ -0.23
VAMP7-206ENST00000488344 KIAA1683Q9H0B3 1180 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 ANTXR1Q9H6X2 564 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 RABGAP1Q9Y3P9 1069 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 BRCA2P51587 3418 aa13.61□□□□□ -0.23
VAMP7-206ENST00000488344 PDE6AP16499 860 aa13.6□□□□□ -0.23
VAMP7-206ENST00000488344 ZKSCAN1P17029 563 aaPredicted RBP13.6□□□□□ -0.23
VAMP7-206ENST00000488344 JAG1P78504 1218 aa13.6□□□□□ -0.23
VAMP7-206ENST00000488344 AMOTL1Q8IY63 956 aa13.6□□□□□ -0.23
VAMP7-206ENST00000488344 DNAJC2Q99543 621 aaKnown RBP13.6□□□□□ -0.23
VAMP7-206ENST00000488344 PAGR1Q9BTK6 254 aa13.6□□□□□ -0.23
VAMP7-206ENST00000488344 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.6□□□□□ -0.23
VAMP7-206ENST00000488344 EMILIN3Q9NT22 766 aa13.6□□□□□ -0.23
VAMP7-206ENST00000488344 NDUFB9Q9Y6M9 179 aa13.6□□□□□ -0.23
VAMP7-206ENST00000488344 A0A1W2PPC1 479 aa13.59□□□□□ -0.23
VAMP7-206ENST00000488344 GOLIM4O00461 696 aa13.59□□□□□ -0.23
VAMP7-206ENST00000488344 PLEKHH3Q7Z736 793 aa13.59□□□□□ -0.23
VAMP7-206ENST00000488344 DDRGK1Q96HY6 314 aa13.59□□□□□ -0.23
VAMP7-206ENST00000488344 APBA2Q99767 749 aa13.59□□□□□ -0.23
VAMP7-206ENST00000488344 ZBTB40Q9NUA8 1239 aa13.59□□□□□ -0.23
VAMP7-206ENST00000488344 MCM9Q9NXL9 1143 aa13.59□□□□□ -0.23
VAMP7-206ENST00000488344 RBPJLQ9UBG7 517 aa13.59□□□□□ -0.23
VAMP7-206ENST00000488344 MGAMO43451 1857 aa13.59□□□□□ -0.23
VAMP7-206ENST00000488344 ATAD5Q96QE3 1844 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 APBB1O00213 710 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 VCAM1P19320 739 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 CYP2B6P20813 491 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 ZYXQ15942 572 aaKnown RBP13.58□□□□□ -0.24
VAMP7-206ENST00000488344 SHROOM1Q2M3G4 852 aaPredicted RBP13.58□□□□□ -0.24
VAMP7-206ENST00000488344 MAP3K21Q5TCX8 1036 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 LBX2Q6XYB7 198 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 GPR142Q7Z601 462 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 TRIB2Q92519 343 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 PAWRQ96IZ0 340 aaKnown RBP13.58□□□□□ -0.24
VAMP7-206ENST00000488344 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 SH2D4AQ9H788 454 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 TXNRD2Q9NNW7 524 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 SWAP70Q9UH65 585 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 COG6Q9Y2V7 657 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 IVNS1ABPQ9Y6Y0 642 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 ZNF532Q9HCE3 1301 aa13.58□□□□□ -0.24
VAMP7-206ENST00000488344 SIPA1L1O43166 1804 aa13.57□□□□□ -0.24
VAMP7-206ENST00000488344 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
VAMP7-206ENST00000488344 SHMT1P34896 483 aa13.57□□□□□ -0.24
VAMP7-206ENST00000488344 PLCD1P51178 756 aa13.57□□□□□ -0.24
VAMP7-206ENST00000488344 GABPAQ06546 454 aa13.57□□□□□ -0.24
VAMP7-206ENST00000488344 MORN1Q5T089 497 aa13.57□□□□□ -0.24
VAMP7-206ENST00000488344 CATSPERGQ6ZRH7 1159 aa13.57□□□□□ -0.24
VAMP7-206ENST00000488344 ATP8A2Q9NTI2 1148 aa13.57□□□□□ -0.24
VAMP7-206ENST00000488344 PAG1Q9NWQ8 432 aa13.57□□□□□ -0.24
VAMP7-206ENST00000488344 RCAN3Q9UKA8 241 aa13.57□□□□□ -0.24
VAMP7-206ENST00000488344 FOCADQ5VW36 1801 aa13.56□□□□□ -0.24
VAMP7-206ENST00000488344 SLC15A5A6NIM6 579 aa13.56□□□□□ -0.24
VAMP7-206ENST00000488344 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
VAMP7-206ENST00000488344 ATP5JP18859 108 aa13.56□□□□□ -0.24
VAMP7-206ENST00000488344 MFSD14CQ5VZR4 134 aa13.56□□□□□ -0.24
VAMP7-206ENST00000488344 ZSCAN25Q6NSZ9 544 aa13.56□□□□□ -0.24
VAMP7-206ENST00000488344 TMEM179Q6ZVK1 233 aa13.56□□□□□ -0.24
VAMP7-206ENST00000488344 USP6NLQ92738 828 aa13.56□□□□□ -0.24
VAMP7-206ENST00000488344 PORCNQ9H237 461 aa13.56□□□□□ -0.24
VAMP7-206ENST00000488344 DCP1AQ9NPI6 582 aaPredicted RBP13.56□□□□□ -0.24
VAMP7-206ENST00000488344 RBM27Q9P2N5 1060 aaKnown RBP13.56□□□□□ -0.24
VAMP7-206ENST00000488344 OGDHLQ9ULD0 1010 aa13.56□□□□□ -0.24
VAMP7-206ENST00000488344 TCRBV5S4A2TA0A5A2 114 aa13.55□□□□□ -0.24
VAMP7-206ENST00000488344 MAP2K5Q13163 448 aa13.55□□□□□ -0.24
VAMP7-206ENST00000488344 Q3C1V9 767 aa13.55□□□□□ -0.24
VAMP7-206ENST00000488344 WDR78Q5VTH9 848 aa13.55□□□□□ -0.24
VAMP7-206ENST00000488344 MB21D1Q8N884 522 aa13.55□□□□□ -0.24
VAMP7-206ENST00000488344 LPAR1Q92633 364 aa13.55□□□□□ -0.24
VAMP7-206ENST00000488344 CCDC17Q96LX7 622 aa13.55□□□□□ -0.24
VAMP7-206ENST00000488344 LRRCC1Q9C099 1032 aa13.55□□□□□ -0.24
VAMP7-206ENST00000488344 C11orf49Q9H6J7 331 aa13.55□□□□□ -0.24
VAMP7-206ENST00000488344 RPAP3Q9H6T3 665 aaPredicted RBP13.55□□□□□ -0.24
VAMP7-206ENST00000488344 ARHGEF10LQ9HCE6 1279 aa13.55□□□□□ -0.24
VAMP7-206ENST00000488344 HOXC10Q9NYD6 342 aa13.55□□□□□ -0.24
VAMP7-206ENST00000488344 SPDYE16A6NNV3 312 aaPredicted RBP13.54□□□□□ -0.24
VAMP7-206ENST00000488344 MSCO60682 206 aa13.54□□□□□ -0.24
VAMP7-206ENST00000488344 ADD2P35612 726 aa13.54□□□□□ -0.24
VAMP7-206ENST00000488344 CACNB2Q08289 660 aaPredicted RBP13.54□□□□□ -0.24
VAMP7-206ENST00000488344 TRIM32Q13049 653 aa13.54□□□□□ -0.24
VAMP7-206ENST00000488344 SEPT2Q15019 361 aa13.54□□□□□ -0.24
VAMP7-206ENST00000488344 SIRT2Q8IXJ6 389 aa13.54□□□□□ -0.24
VAMP7-206ENST00000488344 LCORLQ8N3X6 602 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms