RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, human

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCYT1A-215	ENST00000488235	USP17L2	Q6R6M4	530 aa		13.61	□□□□□ -0.23
PCYT1A-215	ENST00000488235	CERS3	Q8IU89	383 aa		13.61	□□□□□ -0.23
PCYT1A-215	ENST00000488235	DYNLL2	Q96FJ2	89 aa		13.61	□□□□□ -0.23
PCYT1A-215	ENST00000488235	HAUS7	Q99871	368 aa		13.61	□□□□□ -0.23
PCYT1A-215	ENST00000488235	PAK6	Q9NQU5	681 aa	Predicted RBP	13.61	□□□□□ -0.23
PCYT1A-215	ENST00000488235	CYP2D7	A0A087X1C5	515 aa		13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235		A0A1W2PRG0	241 aa		13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	MBD4	O95243	580 aa		13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	POLR3D	P05423	398 aa	Predicted RBP	13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	SEPT2	Q15019	361 aa		13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	KIAA1755	Q5JYT7	1200 aa		13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	TMED8	Q6PL24	325 aa	Predicted RBP	13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	TTC6	Q86TZ1	520 aa		13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	CLEC10A	Q8IUN9	316 aa		13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	TRIB2	Q92519	343 aa		13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	C12orf42	Q96LP6	360 aa		13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	PAGR1	Q9BTK6	254 aa		13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	MCM9	Q9NXL9	1143 aa		13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	COLQ	Q9Y215	455 aa	Predicted RBP	13.6	□□□□□ -0.23
PCYT1A-215	ENST00000488235	FARP2	O94887	1054 aa	Predicted RBP	13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	VCAM1	P19320	739 aa		13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	CYP2B6	P20813	491 aa		13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	ERVK-9	P63128	1117 aa		13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	ERVK-24	P63145	666 aa		13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	TSHZ3	Q63HK5	1081 aa		13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	GPRC5A	Q8NFJ5	357 aa		13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	NKX2-3	Q8TAU0	364 aa		13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	DIS3L	Q8TF46	1054 aa	Known RBP	13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	FEZ1	Q99689	392 aa		13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	KIAA1683	Q9H0B3	1180 aa		13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	CRISPLD2	Q9H0B8	497 aa		13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	COL6A3	P12111	3177 aa		13.59	□□□□□ -0.23
PCYT1A-215	ENST00000488235	HMGCR	P04035	888 aa		13.58	□□□□□ -0.24
PCYT1A-215	ENST00000488235	MNX1	P50219	401 aa	Predicted RBP	13.58	□□□□□ -0.24
PCYT1A-215	ENST00000488235	CCL14	Q16627	93 aa		13.58	□□□□□ -0.24
PCYT1A-215	ENST00000488235	CATSPERG	Q6ZRH7	1159 aa		13.58	□□□□□ -0.24
PCYT1A-215	ENST00000488235	SIAH1	Q8IUQ4	282 aa		13.58	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP6NL	Q92738	828 aa		13.58	□□□□□ -0.24
PCYT1A-215	ENST00000488235	LRRCC1	Q9C099	1032 aa		13.58	□□□□□ -0.24
PCYT1A-215	ENST00000488235	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
PCYT1A-215	ENST00000488235	BTBD7	Q9P203	1132 aa		13.58	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP17L15	C9J2P7	530 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP17L13	C9JLJ4	530 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP17L11	C9JVI0	530 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP17L18	D6R9N7	530 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP17L22	D6RA61	530 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP17L17	D6RBQ6	530 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP17L19	D6RCP7	530 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP17L20	D6RJB6	530 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	TFRC	P02786	760 aa	Known RBP	13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP17L24	Q0WX57	530 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	MORN1	Q5T089	497 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	GPR142	Q7Z601	462 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	DPF3	Q92784	378 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	GCC1	Q96CN9	775 aa		13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	PUS7L	Q9H0K6	701 aa	Known RBP	13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.57	□□□□□ -0.24
PCYT1A-215	ENST00000488235	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.56	□□□□□ -0.24
PCYT1A-215	ENST00000488235	MPHOSPH10	O00566	681 aa	Known RBP	13.56	□□□□□ -0.24
PCYT1A-215	ENST00000488235	AKR1B1	P15121	316 aa		13.56	□□□□□ -0.24
PCYT1A-215	ENST00000488235	FXR1	P51114	621 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
PCYT1A-215	ENST00000488235	MAP3K21	Q5TCX8	1036 aa		13.56	□□□□□ -0.24
PCYT1A-215	ENST00000488235	PAWR	Q96IZ0	340 aa	Known RBP	13.56	□□□□□ -0.24
PCYT1A-215	ENST00000488235	CABP5	Q9NP86	173 aa		13.56	□□□□□ -0.24
PCYT1A-215	ENST00000488235	PCDH10	Q9P2E7	1040 aa		13.56	□□□□□ -0.24
PCYT1A-215	ENST00000488235	PCDHB15	Q9Y5E8	787 aa		13.56	□□□□□ -0.24
PCYT1A-215	ENST00000488235		A0A0C4DFX4	3053 aa		13.56	□□□□□ -0.24
PCYT1A-215	ENST00000488235	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP17L12	C9JPN9	530 aa		13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP17L21	D6R901	530 aa		13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	PRKAR2A	P13861	404 aa	Known RBP	13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	UBE3C	Q15386	1083 aa		13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	C12orf60	Q5U649	245 aa		13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	CHRDL2	Q6WN34	429 aa		13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	SOCS4	Q8WXH5	440 aa		13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	NUDT12	Q9BQG2	462 aa		13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	CHMP4B	Q9H444	224 aa	Known RBP	13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	DCTPP1	Q9H773	170 aa		13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	FLRT1	Q9NZU1	646 aa		13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	RABGAP1	Q9Y3P9	1069 aa		13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	RPTOR	Q8N122	1335 aa		13.55	□□□□□ -0.24
PCYT1A-215	ENST00000488235	XRCC5	P13010	732 aa	Known RBP	13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	MAPK4	P31152	587 aa		13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	USP14	P54578	494 aa		13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	CACNB2	Q08289	660 aa	Predicted RBP	13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	PLEKHH3	Q7Z736	793 aa		13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	PRO3102	Q9H379	93 aa		13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	ATP8A2	Q9NTI2	1148 aa		13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	ECHDC1	Q9NTX5	307 aa		13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	RBM27	Q9P2N5	1060 aa	Known RBP	13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	SLC4A4	Q9Y6R1	1079 aa		13.54	□□□□□ -0.24
PCYT1A-215	ENST00000488235	RLF	Q13129	1914 aa		13.53	□□□□□ -0.24
PCYT1A-215	ENST00000488235	ALPK3	Q96L96	1907 aa		13.53	□□□□□ -0.24
PCYT1A-215	ENST00000488235	CCND3	P30281	292 aa	Predicted RBP	13.53	□□□□□ -0.24
PCYT1A-215	ENST00000488235	CDK8	P49336	464 aa		13.53	□□□□□ -0.24
PCYT1A-215	ENST00000488235	CTR9	Q6PD62	1173 aa		13.53	□□□□□ -0.24
PCYT1A-215	ENST00000488235	LBX2	Q6XYB7	198 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms