RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 PNMA1Q8ND90 353 aa13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 BIN2Q9UBW5 565 aaPredicted RBP13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 CSADQ9Y600 493 aa13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 TUBB4AP04350 444 aa13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 PRDX5P30044 214 aa13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 KRT40Q6A162 431 aa13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 BRAPQ7Z569 592 aa13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 GOLGA1Q92805 767 aa13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 TMC4Q7Z404 712 aa13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 JADE2Q9NQC1 790 aa13.15□□□□□ -0.3
LDLRAP1-207ENST00000488127 ADD2P35612 726 aa13.15□□□□□ -0.31
LDLRAP1-207ENST00000488127 SSR1P43307 286 aaKnown RBP13.15□□□□□ -0.31
LDLRAP1-207ENST00000488127 MAATS1Q7Z4T9 603 aa13.15□□□□□ -0.31
LDLRAP1-207ENST00000488127 TCHPQ9BT92 498 aa13.15□□□□□ -0.31
LDLRAP1-207ENST00000488127 ARID4AP29374 1257 aaPredicted RBP13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 SMCR8Q8TEV9 937 aaPredicted RBP13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 ZSCAN10Q96SZ4 725 aaPredicted RBP13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 PAGR1Q9BTK6 254 aa13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 USP17L8P0C7I0 530 aa13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 TXKP42681 527 aa13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 ICA1Q05084 483 aa13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 GAS2L3Q86XJ1 694 aa13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 STX17P56962 302 aa13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 ATRIPQ8WXE1 791 aa13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 DCPSQ96C86 337 aaKnown RBP13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 LSG1Q9H089 658 aaKnown RBP13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 OSBPL3Q9H4L5 887 aa13.14□□□□□ -0.31
LDLRAP1-207ENST00000488127 GDF11O95390 407 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 MECOMQ03112 1051 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 BARGINQ6ZT62 677 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 MAP4K1Q92918 833 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 HOOK2Q96ED9 719 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 PPP1R9BQ96SB3 815 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■■■ 211.7
LDLRAP1-207ENST00000488127 TPCN1Q9ULQ1 816 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 MST1RQ04912 1400 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 NRKQ7Z2Y5 1582 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 SEMA3EO15041 775 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 ZNF500O60304 480 aaPredicted RBP13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 CCNT1O60563 726 aaKnown RBP13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 CDC37L1Q7L3B6 337 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 MIGA2Q7L4E1 593 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 CEP57Q86XR8 500 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 TM6SF1Q9BZW5 370 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 NRXN1Q9ULB1 1477 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 TMEM131LA2VDJ0 1609 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 DDX39AO00148 427 aaKnown RBP13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 FGFR1OPO95684 399 aaKnown RBP13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 ELF2Q15723 593 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 DYNLL2Q96FJ2 89 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 PYM1Q9BRP8 204 aaKnown RBP13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 ATP8A2Q9NTI2 1148 aa13.13□□□□□ -0.31
LDLRAP1-207ENST00000488127 N4BP3O15049 544 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 EVCP57679 992 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 KRI1Q8N9T8 703 aaKnown RBP13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 TAOK3Q9H2K8 898 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 LMBRD1Q9NUN5 540 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 B4DLN1 442 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 RILPL1Q5EBL4 403 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 CC2D2BQ6DHV5 1058 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 NAA15Q9BXJ9 866 aaKnown RBP13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 ZNF277Q9NRM2 450 aaPredicted RBP13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 FER1L4A9Z1Z3 1794 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 A0A0G2JLW4 131 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 NBPF11Q86T75 865 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 PI4K2BQ8TCG2 481 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 PUF60Q9UHX1 559 aaKnown RBP13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 AOC3Q16853 763 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 CIAPIN1Q6FI81 312 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 STXBP4Q6ZWJ1 553 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 OTUD6BQ8N6M0 293 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 TMEM63CQ9P1W3 806 aa13.12□□□□□ -0.31
LDLRAP1-207ENST00000488127 ZBED4O75132 1171 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 SMC1AQ14683 1233 aaKnown RBP13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 ABCB5Q2M3G0 1257 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 IFNKQ9P0W0 207 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 HSF2BPO75031 334 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 CEP112Q8N8E3 955 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.312e-6■■■□□ 15.9
LDLRAP1-207ENST00000488127 ALAS1P13196 640 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 ADCY7P51828 1080 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 DCAF15Q66K64 600 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 LRRC27Q9C0I9 530 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 SERPINB13Q9UIV8 391 aa13.11□□□□□ -0.31
LDLRAP1-207ENST00000488127 GINS2Q9Y248 185 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms