RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 LRRCC1Q9C099 1032 aa24.47■■□□□ 1.51
TRIM8-204ENST00000487927 ARMT1Q9H993 441 aa24.47■■□□□ 1.51
TRIM8-204ENST00000487927 DCP1AQ9NPI6 582 aaPredicted RBP24.47■■□□□ 1.51
TRIM8-204ENST00000487927 MCM9Q9NXL9 1143 aa24.47■■□□□ 1.51
TRIM8-204ENST00000487927 RBPJLQ9UBG7 517 aa24.47■■□□□ 1.51
TRIM8-204ENST00000487927 TAOK2Q9UL54 1235 aa24.47■■□□□ 1.51
TRIM8-204ENST00000487927 CHGBP05060 677 aa24.46■■□□□ 1.51
TRIM8-204ENST00000487927 RAB3GAP1Q15042 981 aa24.46■■□□□ 1.51
TRIM8-204ENST00000487927 ZYXQ15942 572 aaKnown RBP24.46■■□□□ 1.51
TRIM8-204ENST00000487927 ACER1Q8TDN7 264 aa24.46■■□□□ 1.51
TRIM8-204ENST00000487927 CYP2D6P10635 497 aa24.45■■□□□ 1.5
TRIM8-204ENST00000487927 PRKAB2O43741 272 aa24.44■■□□□ 1.5
TRIM8-204ENST00000487927 SGPL1O95470 568 aa24.44■■□□□ 1.5
TRIM8-204ENST00000487927 Q3C1V9 767 aa24.44■■□□□ 1.5
TRIM8-204ENST00000487927 GPRC5AQ8NFJ5 357 aa24.44■■□□□ 1.5
TRIM8-204ENST00000487927 GCC1Q96CN9 775 aa24.44■■□□□ 1.5
TRIM8-204ENST00000487927 FEZ1Q99689 392 aa24.44■■□□□ 1.5
TRIM8-204ENST00000487927 KIAA1683Q9H0B3 1180 aa24.44■■□□□ 1.5
TRIM8-204ENST00000487927 RWDD1Q9H446 243 aaPredicted RBP24.44■■□□□ 1.5
TRIM8-204ENST00000487927 CABP5Q9NP86 173 aa24.44■■□□□ 1.5
TRIM8-204ENST00000487927 PAK6Q9NQU5 681 aaPredicted RBP24.44■■□□□ 1.5
TRIM8-204ENST00000487927 MBD4O95243 580 aa24.43■■□□□ 1.5
TRIM8-204ENST00000487927 VCAM1P19320 739 aa24.42■■□□□ 1.5
TRIM8-204ENST00000487927 USP14P54578 494 aa24.42■■□□□ 1.5
TRIM8-204ENST00000487927 ERVK-9P63128 1117 aa24.42■■□□□ 1.5
TRIM8-204ENST00000487927 ERVK-24P63145 666 aa24.42■■□□□ 1.5
TRIM8-204ENST00000487927 SEPT2Q15019 361 aa24.42■■□□□ 1.5
TRIM8-204ENST00000487927 SLC44A5Q8NCS7 719 aa24.42■■□□□ 1.5
TRIM8-204ENST00000487927 GTF3C2Q8WUA4 911 aaPredicted RBP24.42■■□□□ 1.5
TRIM8-204ENST00000487927 DCTPP1Q9H773 170 aa24.42■■□□□ 1.5
TRIM8-204ENST00000487927 USP17L15C9J2P7 530 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 USP17L13C9JLJ4 530 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 USP17L11C9JVI0 530 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 USP17L18D6R9N7 530 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 USP17L22D6RA61 530 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 USP17L17D6RBQ6 530 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 USP17L19D6RCP7 530 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 USP17L20D6RJB6 530 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 HMGCRP04035 888 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 USP17L24Q0WX57 530 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 TRIM32Q13049 653 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 UBE3CQ15386 1083 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 DEFB118Q96PH6 123 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 PAGR1Q9BTK6 254 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.41■■□□□ 1.5
TRIM8-204ENST00000487927 PORCNQ9H237 461 aa24.41■■□□□ 1.5
TRIM8-204ENST00000487927 SMIM22K7EJ46 135 aa24.4■■□□□ 1.5
TRIM8-204ENST00000487927 CNMDO75829 334 aa24.4■■□□□ 1.5
TRIM8-204ENST00000487927 HABP4Q5JVS0 413 aaKnown RBP24.4■■□□□ 1.5
TRIM8-204ENST00000487927 CATSPERGQ6ZRH7 1159 aa24.4■■□□□ 1.5
TRIM8-204ENST00000487927 TRIB2Q92519 343 aa24.4■■□□□ 1.5
TRIM8-204ENST00000487927 DYNLL2Q96FJ2 89 aa24.4■■□□□ 1.5
TRIM8-204ENST00000487927 RLFQ13129 1914 aa24.39■■□□□ 1.5
TRIM8-204ENST00000487927 A0A1W2PRG0 241 aa24.39■■□□□ 1.49
TRIM8-204ENST00000487927 FARP2O94887 1054 aaPredicted RBP24.39■■□□□ 1.49
TRIM8-204ENST00000487927 MAPK4P31152 587 aa24.39■■□□□ 1.49
TRIM8-204ENST00000487927 HDAC1Q13547 482 aaPredicted RBP24.39■■□□□ 1.49
TRIM8-204ENST00000487927 CRISPLD2Q9H0B8 497 aa24.39■■□□□ 1.49
TRIM8-204ENST00000487927 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.39■■□□□ 1.498e-7■■■□□ 14.6
TRIM8-204ENST00000487927 ATP8A2Q9NTI2 1148 aa24.39■■□□□ 1.49
TRIM8-204ENST00000487927 ECHDC1Q9NTX5 307 aa24.39■■□□□ 1.49
TRIM8-204ENST00000487927 ALPK3Q96L96 1907 aa24.38■■□□□ 1.49
TRIM8-204ENST00000487927 H0YGN5 161 aa24.38■■□□□ 1.49
TRIM8-204ENST00000487927 MPHOSPH10O00566 681 aaKnown RBP24.38■■□□□ 1.49
TRIM8-204ENST00000487927 CYP2B6P20813 491 aa24.38■■□□□ 1.49
TRIM8-204ENST00000487927 USP6NLQ92738 828 aa24.38■■□□□ 1.49
TRIM8-204ENST00000487927 NUDT12Q9BQG2 462 aa24.38■■□□□ 1.49
TRIM8-204ENST00000487927 PUS7LQ9H0K6 701 aaKnown RBP24.38■■□□□ 1.49
TRIM8-204ENST00000487927 SWAP70Q9UH65 585 aa24.38■■□□□ 1.49
TRIM8-204ENST00000487927 RABGAP1Q9Y3P9 1069 aa24.38■■□□□ 1.49
TRIM8-204ENST00000487927 CYP2D7A0A087X1C5 515 aa24.37■■□□□ 1.49
TRIM8-204ENST00000487927 TFRCP02786 760 aaKnown RBP24.37■■□□□ 1.49
TRIM8-204ENST00000487927 GPR142Q7Z601 462 aa24.37■■□□□ 1.49
TRIM8-204ENST00000487927 SOCS4Q8WXH5 440 aa24.37■■□□□ 1.49
TRIM8-204ENST00000487927 RPAP3Q9H6T3 665 aaPredicted RBP24.37■■□□□ 1.49
TRIM8-204ENST00000487927 MORN1Q5T089 497 aa24.36■■□□□ 1.49
TRIM8-204ENST00000487927 C12orf60Q5U649 245 aa24.36■■□□□ 1.49
TRIM8-204ENST00000487927 LBX2Q6XYB7 198 aa24.36■■□□□ 1.49
TRIM8-204ENST00000487927 DPF3Q92784 378 aa24.36■■□□□ 1.49
TRIM8-204ENST00000487927 PCDHB15Q9Y5E8 787 aa24.36■■□□□ 1.49
TRIM8-204ENST00000487927 RPTORQ8N122 1335 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 A0A0G2JMZ2 1700 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 PARP14Q460N5 1801 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 SPDYE16A6NNV3 312 aaPredicted RBP24.35■■□□□ 1.49
TRIM8-204ENST00000487927 USP17L12C9JPN9 530 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 USP17L21D6R901 530 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 XRCC5P13010 732 aaKnown RBP24.35■■□□□ 1.49
TRIM8-204ENST00000487927 AKR1B1P15121 316 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 CAPN2P17655 700 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 MAP3K21Q5TCX8 1036 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 TSHZ3Q63HK5 1081 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 ZSCAN25Q6NSZ9 544 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 TMEM179Q6ZVK1 233 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 PLEKHH3Q7Z736 793 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 SIAH1Q8IUQ4 282 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 HTATIP2Q9BUP3 242 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 BTBD7Q9P203 1132 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 COLQQ9Y215 455 aaPredicted RBP24.35■■□□□ 1.49
TRIM8-204ENST00000487927 SLC4A4Q9Y6R1 1079 aa24.35■■□□□ 1.49
TRIM8-204ENST00000487927 TRIOBPQ9H2D6 2365 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms