RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ARHGEF35A5YM69 484 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 ADKP55263 362 aaKnown RBP16.34■□□□□ 0.21
EPHB4-206ENST00000487222 LIN9Q5TKA1 542 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 SFMBT2Q5VUG0 894 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 PAXIP1Q6ZW49 1069 aaPredicted RBP16.34■□□□□ 0.21
EPHB4-206ENST00000487222 TMEM87AQ8NBN3 555 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 RAB3IL1Q8TBN0 382 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 DNM3Q9UQ16 869 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 FAM135BQ49AJ0 1406 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 CCDC160A6NGH7 325 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 ARHGAP25P42331 645 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 ETF1P62495 437 aaKnown RBP16.34■□□□□ 0.21
EPHB4-206ENST00000487222 CALCRLQ16602 461 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 MAP7D1Q3KQU3 841 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 ZNF654Q8IZM8 581 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 TRIML1Q8N9V2 468 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 CCDC110Q8TBZ0 833 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 IFIH1Q9BYX4 1025 aaKnown RBP16.34■□□□□ 0.21
EPHB4-206ENST00000487222 CTTNBP2NLQ9P2B4 639 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 MKRN1Q9UHC7 482 aaKnown RBP16.34■□□□□ 0.21
EPHB4-206ENST00000487222 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 CHMP2AO43633 222 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 SLAIN2Q9P270 581 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 NDC80O14777 642 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 RBM6P78332 1123 aaKnown RBP16.34■□□□□ 0.21
EPHB4-206ENST00000487222 KLHL7Q8IXQ5 586 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 BLZF1Q9H2G9 400 aa16.34■□□□□ 0.21
EPHB4-206ENST00000487222 KDRP35968 1356 aa16.33■□□□□ 0.21
EPHB4-206ENST00000487222 SP4Q02446 784 aa16.33■□□□□ 0.21
EPHB4-206ENST00000487222 MTMR3Q13615 1198 aa16.33■□□□□ 0.21
EPHB4-206ENST00000487222 TRIM31Q9BZY9 425 aa16.33■□□□□ 0.21
EPHB4-206ENST00000487222 ANAPC4Q9UJX5 808 aa16.33■□□□□ 0.21
EPHB4-206ENST00000487222 MAST3O60307 1309 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 CCDC169A6NNP5 214 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 EIF6P56537 245 aaKnown RBP16.33■□□□□ 0.2
EPHB4-206ENST00000487222 CFAP157Q5JU67 520 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 NBPF14Q5TI25 921 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 NCAPH2Q6IBW4 605 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 DAAM2Q86T65 1068 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 STMN2Q93045 179 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 PKD2L1Q9P0L9 805 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 STAP2Q9UGK3 403 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 GGA1Q9UJY5 639 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 ADGBQ8N7X0 1667 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 TCIRG1Q13488 830 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 GAS2L3Q86XJ1 694 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 CABS1Q96KC9 395 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 AGTPBP1Q9UPW5 1226 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 TAOK1Q7L7X3 1001 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 REXO1Q8N1G1 1221 aaKnown RBP16.33■□□□□ 0.2
EPHB4-206ENST00000487222 PSMB7Q99436 277 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 ARHGEF10LQ9HCE6 1279 aa16.33■□□□□ 0.2
EPHB4-206ENST00000487222 LRMPQ12912 555 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 FYB2Q5VWT5 728 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 ZFYVE16Q7Z3T8 1539 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 A0A1B0GUA9 196 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 DKC1O60832 514 aaKnown RBP eCLIP16.32■□□□□ 0.2
EPHB4-206ENST00000487222 PPARAQ07869 468 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 PEX26Q7Z412 305 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 LRRC8AQ8IWT6 810 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 CFAP65Q6ZU64 1925 aaKnown RBP16.32■□□□□ 0.2
EPHB4-206ENST00000487222 KDM5AP29375 1690 aaKnown RBP16.32■□□□□ 0.2
EPHB4-206ENST00000487222 ATP11AP98196 1134 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 TFAP4Q01664 338 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 APBB1IPQ7Z5R6 666 aaPredicted RBP16.32■□□□□ 0.2
EPHB4-206ENST00000487222 HAUS7Q99871 368 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 FAM207AQ9NSI2 230 aaPredicted RBP16.32■□□□□ 0.2
EPHB4-206ENST00000487222 HSPD1P10809 573 aaKnown RBP16.32■□□□□ 0.2
EPHB4-206ENST00000487222 SLC1A4P43007 532 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 ERCC6LQ2NKX8 1250 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 RRAGAQ7L523 313 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 TRIM58Q8NG06 486 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 ASIC3Q9UHC3 531 aa16.32■□□□□ 0.2
EPHB4-206ENST00000487222 ZNF215Q9UL58 517 aaPredicted RBP16.32■□□□□ 0.2
EPHB4-206ENST00000487222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.31■□□□□ 0.2
EPHB4-206ENST00000487222 hCG_1642624A0A1W2PR95 340 aa16.31■□□□□ 0.2
EPHB4-206ENST00000487222 POLD1P28340 1107 aa16.31■□□□□ 0.2
EPHB4-206ENST00000487222 NT5C3AQ9H0P0 336 aa16.31■□□□□ 0.2
EPHB4-206ENST00000487222 OSBPL3Q9H4L5 887 aa16.31■□□□□ 0.2
EPHB4-206ENST00000487222 UAP1Q16222 522 aaPredicted RBP16.31■□□□□ 0.2
EPHB4-206ENST00000487222 PCDHA7Q9UN72 937 aa16.31■□□□□ 0.2
EPHB4-206ENST00000487222 GNA14O95837 355 aa16.31■□□□□ 0.2
EPHB4-206ENST00000487222 RBM26Q5T8P6 1007 aaKnown RBP16.31■□□□□ 0.2
EPHB4-206ENST00000487222 TYW1BQ6NUM6 668 aa16.31■□□□□ 0.2
EPHB4-206ENST00000487222 FAM204AQ9H8W3 233 aa16.31■□□□□ 0.2
EPHB4-206ENST00000487222 PPP2R2CQ9Y2T4 447 aa16.31■□□□□ 0.2
EPHB4-206ENST00000487222 EFCAB8A8MWE9 144 aa16.3■□□□□ 0.2
EPHB4-206ENST00000487222 EXOC3O60645 756 aa16.3■□□□□ 0.2
EPHB4-206ENST00000487222 BCRP11274 1271 aa16.3■□□□□ 0.2
EPHB4-206ENST00000487222 PHKG2P15735 406 aa16.3■□□□□ 0.2
EPHB4-206ENST00000487222 C2CD5Q86YS7 1000 aa16.3■□□□□ 0.2
EPHB4-206ENST00000487222 NELFCDQ8IXH7 590 aa16.3■□□□□ 0.2
EPHB4-206ENST00000487222 DDX17Q92841 729 aaKnown RBP16.3■□□□□ 0.2
EPHB4-206ENST00000487222 KCNJ18B7U540 433 aa16.3■□□□□ 0.2
EPHB4-206ENST00000487222 PSMC4P43686 418 aa16.3■□□□□ 0.2
EPHB4-206ENST00000487222 KCNJ12Q14500 433 aa16.3■□□□□ 0.2
EPHB4-206ENST00000487222 ARPP21Q9UBL0 812 aaPredicted RBP16.3■□□□□ 0.2
EPHB4-206ENST00000487222 ZMYM6O95789 1325 aa16.3■□□□□ 0.2
EPHB4-206ENST00000487222 CIB2O75838 187 aa16.3■□□□□ 0.2
EPHB4-206ENST00000487222 NAA25Q14CX7 972 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms