RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 MFSD14CQ5VZR4 134 aa18.35■□□□□ 0.53
PFDN4-204ENST00000487129 NAA16Q6N069 864 aaPredicted RBP18.35■□□□□ 0.53
PFDN4-204ENST00000487129 LBX2Q6XYB7 198 aa18.35■□□□□ 0.53
PFDN4-204ENST00000487129 CCAR1Q8IX12 1150 aaKnown RBP18.35■□□□□ 0.53
PFDN4-204ENST00000487129 API5Q9BZZ5 524 aaKnown RBP18.35■□□□□ 0.53
PFDN4-204ENST00000487129 RNF39Q9H2S5 420 aa18.35■□□□□ 0.53
PFDN4-204ENST00000487129 PRDM6Q9NQX0 595 aa18.35■□□□□ 0.53
PFDN4-204ENST00000487129 MSCO60682 206 aa18.34■□□□□ 0.53
PFDN4-204ENST00000487129 PLCG2P16885 1265 aa18.34■□□□□ 0.53
PFDN4-204ENST00000487129 SNX17Q15036 470 aa18.34■□□□□ 0.53
PFDN4-204ENST00000487129 CATSPERGQ6ZRH7 1159 aa18.34■□□□□ 0.53
PFDN4-204ENST00000487129 CRACR2BQ8N4Y2 399 aaPredicted RBP18.34■□□□□ 0.53
PFDN4-204ENST00000487129 USP17L15C9J2P7 530 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 USP17L13C9JLJ4 530 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 USP17L11C9JVI0 530 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 USP17L18D6R9N7 530 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 USP17L22D6RA61 530 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 USP17L17D6RBQ6 530 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 USP17L19D6RCP7 530 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 USP17L20D6RJB6 530 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 BAG3O95817 575 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 CYP2E1P05181 493 aaPredicted RBP18.33■□□□□ 0.52
PFDN4-204ENST00000487129 UQCRFS1P1P0C7P4 283 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 VCAM1P19320 739 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 USP17L24Q0WX57 530 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 ZYXQ15942 572 aaKnown RBP18.33■□□□□ 0.52
PFDN4-204ENST00000487129 GORABQ5T7V8 394 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 TATDN1Q6P1N9 297 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 MYLIPQ8WY64 445 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 SNRKQ9NRH2 765 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 SAP30BPQ9UHR5 308 aaKnown RBP18.33■□□□□ 0.52
PFDN4-204ENST00000487129 ZNF236Q9UL36 1845 aa18.33■□□□□ 0.52
PFDN4-204ENST00000487129 PNMA6EA0A0J9YXQ4 647 aa18.32■□□□□ 0.52
PFDN4-204ENST00000487129 SPDYE16A6NNV3 312 aaPredicted RBP18.32■□□□□ 0.52
PFDN4-204ENST00000487129 CCNA1P78396 465 aa18.32■□□□□ 0.52
PFDN4-204ENST00000487129 SMAD3P84022 425 aaKnown RBP18.32■□□□□ 0.52
PFDN4-204ENST00000487129 GJC2Q5T442 439 aaPredicted RBP18.32■□□□□ 0.52
PFDN4-204ENST00000487129 SLC39A5Q6ZMH5 540 aa18.32■□□□□ 0.52
PFDN4-204ENST00000487129 ACER1Q8TDN7 264 aa18.32■□□□□ 0.52
PFDN4-204ENST00000487129 NOL10Q9BSC4 688 aaKnown RBP18.32■□□□□ 0.52
PFDN4-204ENST00000487129 KIAA1683Q9H0B3 1180 aa18.32■□□□□ 0.52
PFDN4-204ENST00000487129 ATP11BQ9Y2G3 1177 aa18.32■□□□□ 0.52
PFDN4-204ENST00000487129 MYO5AQ9Y4I1 1855 aaKnown RBP18.32■□□□□ 0.52
PFDN4-204ENST00000487129 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
PFDN4-204ENST00000487129 GNAI3P08754 354 aa18.31■□□□□ 0.52
PFDN4-204ENST00000487129 CNGA1P29973 690 aa18.31■□□□□ 0.52
PFDN4-204ENST00000487129 DYNLL1P63167 89 aaKnown RBP18.31■□□□□ 0.52
PFDN4-204ENST00000487129 ATP2B2Q01814 1243 aa18.31■□□□□ 0.52
PFDN4-204ENST00000487129 SH3RF1Q7Z6J0 888 aa18.31■□□□□ 0.52
PFDN4-204ENST00000487129 BADQ92934 168 aa18.31■□□□□ 0.52
PFDN4-204ENST00000487129 PDLIM7Q9NR12 457 aa18.31■□□□□ 0.52
PFDN4-204ENST00000487129 TRIM43BA6NCK2 446 aa18.3■□□□□ 0.52
PFDN4-204ENST00000487129 TRIM60Q495X7 471 aa18.3■□□□□ 0.52
PFDN4-204ENST00000487129 WDR78Q5VTH9 848 aa18.3■□□□□ 0.52
PFDN4-204ENST00000487129 TRIM43Q96BQ3 446 aaPredicted RBP18.3■□□□□ 0.52
PFDN4-204ENST00000487129 TRIM34Q9BYJ4 488 aa18.3■□□□□ 0.52
PFDN4-204ENST00000487129 PIH1D3Q9NQM4 214 aaKnown RBP18.3■□□□□ 0.52
PFDN4-204ENST00000487129 PRKAG2Q9UGJ0 569 aa18.3■□□□□ 0.52
PFDN4-204ENST00000487129 HLA-DOAP06340 250 aa18.29■□□□□ 0.52
PFDN4-204ENST00000487129 ITGB8P26012 769 aa18.29■□□□□ 0.52
PFDN4-204ENST00000487129 GUCY1A2P33402 732 aa18.29■□□□□ 0.52
PFDN4-204ENST00000487129 FEZ1Q99689 392 aa18.29■□□□□ 0.52
PFDN4-204ENST00000487129 DBNDD2Q9BQY9 259 aa18.29■□□□□ 0.52
PFDN4-204ENST00000487129 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
PFDN4-204ENST00000487129 A0A0G2JMZ2 1700 aa18.29■□□□□ 0.52
PFDN4-204ENST00000487129 CT47B1P0C2W7 299 aaPredicted RBP18.28■□□□□ 0.52
PFDN4-204ENST00000487129 EPHB4P54760 987 aa18.28■□□□□ 0.52
PFDN4-204ENST00000487129 C1orf53Q5VUE5 145 aa18.28■□□□□ 0.52
PFDN4-204ENST00000487129 ANO1Q5XXA6 986 aa18.28■□□□□ 0.52
PFDN4-204ENST00000487129 OLFML2BQ68BL8 750 aa18.28■□□□□ 0.52
PFDN4-204ENST00000487129 EHD4Q9H223 541 aa18.28■□□□□ 0.52
PFDN4-204ENST00000487129 IVNS1ABPQ9Y6Y0 642 aa18.28■□□□□ 0.52
PFDN4-204ENST00000487129 COBLO75128 1261 aa18.27■□□□□ 0.52
PFDN4-204ENST00000487129 ADORA2AP29274 412 aa18.27■□□□□ 0.52
PFDN4-204ENST00000487129 ZAP70P43403 619 aa18.27■□□□□ 0.52
PFDN4-204ENST00000487129 RARSP54136 660 aaKnown RBP18.27■□□□□ 0.52
PFDN4-204ENST00000487129 USP14P54578 494 aa18.27■□□□□ 0.52
PFDN4-204ENST00000487129 ARRDC4Q8NCT1 418 aa18.27■□□□□ 0.52
PFDN4-204ENST00000487129 ARHGAP45Q92619 1136 aa18.27■□□□□ 0.52
PFDN4-204ENST00000487129 ZNF512BQ96KM6 892 aaPredicted RBP18.27■□□□□ 0.52
PFDN4-204ENST00000487129 MOV10L1Q9BXT6 1211 aaKnown RBP18.27■□□□□ 0.52
PFDN4-204ENST00000487129 RPAP3Q9H6T3 665 aaPredicted RBP18.27■□□□□ 0.52
PFDN4-204ENST00000487129 GPR108Q9NPR9 543 aa18.27■□□□□ 0.52
PFDN4-204ENST00000487129 PRDM5Q9NQX1 630 aaPredicted RBP18.27■□□□□ 0.52
PFDN4-204ENST00000487129 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.52
PFDN4-204ENST00000487129 MYH1P12882 1939 aa18.26■□□□□ 0.51
PFDN4-204ENST00000487129 SEPT4O43236 478 aa18.26■□□□□ 0.51
PFDN4-204ENST00000487129 IGSF3O75054 1194 aa18.26■□□□□ 0.51
PFDN4-204ENST00000487129 FOSL2P15408 326 aa18.26■□□□□ 0.51
PFDN4-204ENST00000487129 SHMT1P34896 483 aa18.26■□□□□ 0.51
PFDN4-204ENST00000487129 RAB3GAP1Q15042 981 aa18.26■□□□□ 0.51
PFDN4-204ENST00000487129 TNNI3KQ59H18 835 aa18.26■□□□□ 0.51
PFDN4-204ENST00000487129 ATF7IPQ6VMQ6 1270 aa18.26■□□□□ 0.51
PFDN4-204ENST00000487129 USP38Q8NB14 1042 aa18.26■□□□□ 0.51
PFDN4-204ENST00000487129 TNNQ9UQP3 1299 aa18.26■□□□□ 0.51
PFDN4-204ENST00000487129 FPGT-TNNI3KV9GXZ4 949 aa18.26■□□□□ 0.51
PFDN4-204ENST00000487129 A0A1W2PRG0 241 aa18.25■□□□□ 0.51
PFDN4-204ENST00000487129 KBTBD13C9JR72 458 aa18.25■□□□□ 0.51
PFDN4-204ENST00000487129 ADCYAP1R1P41586 468 aa18.25■□□□□ 0.51
PFDN4-204ENST00000487129 G3BP1Q13283 466 aaKnown RBP eCLIP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms