RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 A0A0D9SFI3 127 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 USP17L10C9JJH3 530 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 PDE4AP27815 886 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 MFAP1P55081 439 aaKnown RBP12.19□□□□□ -0.46
NEK4-204ENST00000487068 GABPAQ06546 454 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 PABPC4Q13310 644 aaKnown RBP eCLIP12.19□□□□□ -0.46
NEK4-204ENST00000487068 TTC22Q5TAA0 569 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 GIMAP6Q6P9H5 292 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 C16orf86Q6ZW13 317 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 CENPQQ7L2Z9 268 aaPredicted RBP12.19□□□□□ -0.46
NEK4-204ENST00000487068 IFNL3Q8IZI9 196 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 PROCA1Q8NCQ7 364 aaPredicted RBP12.19□□□□□ -0.46
NEK4-204ENST00000487068 ERO1AQ96HE7 468 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 FAM227BQ96M60 508 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 HELLSQ9NRZ9 838 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 AGTPBP1Q9UPW5 1226 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 TRIM17Q9Y577 477 aa12.19□□□□□ -0.46
NEK4-204ENST00000487068 RBBP6Q7Z6E9 1792 aaKnown RBP12.19□□□□□ -0.46
NEK4-204ENST00000487068 PLXNB2O15031 1838 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 PATL2C9JE40 543 aaKnown RBP12.18□□□□□ -0.46
NEK4-204ENST00000487068 HIP1O00291 1037 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 TLR2O60603 784 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 SLC3A2P08195 630 aaKnown RBP12.18□□□□□ -0.46
NEK4-204ENST00000487068 CYP2C8P10632 490 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 CDK8P49336 464 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 IRX3P78415 501 aaPredicted RBP12.18□□□□□ -0.46
NEK4-204ENST00000487068 JAG1P78504 1218 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 ATP2B2Q01814 1243 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 SP3Q02447 781 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 KIF22Q14807 665 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 SEPT2Q15019 361 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 MCMDC2Q4G0Z9 681 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 TREML2Q5T2D2 321 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 CWC27Q6UX04 472 aaKnown RBP12.18□□□□□ -0.46
NEK4-204ENST00000487068 TMEM179Q6ZVK1 233 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 CD99L2Q8TCZ2 262 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 WDR18Q9BV38 432 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 ZNF287Q9HBT7 754 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 CPA4Q9UI42 421 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 ROBO3Q96MS0 1386 aa12.18□□□□□ -0.46
NEK4-204ENST00000487068 MYH6P13533 1939 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 CCDC171Q6TFL3 1326 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 C19orf81C9J6K1 198 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 SMIM22K7EJ46 135 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 RAD21O60216 631 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 AKR1B1P15121 316 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 SDSP20132 328 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 OSBPP22059 807 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 BACE1P56817 501 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 ICA1Q05084 483 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 MOGSQ13724 837 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 SBK1Q52WX2 424 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 HABP4Q5JVS0 413 aaKnown RBP12.17□□□□□ -0.46
NEK4-204ENST00000487068 OTOP1Q7RTM1 612 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 ARHGEF10LQ9HCE6 1279 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 TAOK2Q9UL54 1235 aa12.17□□□□□ -0.46
NEK4-204ENST00000487068 POTEFA5A3E0 1075 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 PRDM1O75626 825 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 GSPT1P15170 499 aaKnown RBP12.16□□□□□ -0.46
NEK4-204ENST00000487068 USP14P54578 494 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 PDE4BQ07343 736 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 ARHGEF6Q15052 776 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 VPS53Q5VIR6 699 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 GPAT2Q6NUI2 795 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 USP17L2Q6R6M4 530 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 CLEC10AQ8IUN9 316 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 CCDC17Q96LX7 622 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 SH2D4AQ9H788 454 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 TOMM22Q9NS69 142 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 A0A0G2JMZ2 1700 aa12.16□□□□□ -0.46
NEK4-204ENST00000487068 PPARAQ07869 468 aa12.15□□□□□ -0.46
NEK4-204ENST00000487068 SH3D19Q5HYK7 790 aa12.15□□□□□ -0.46
NEK4-204ENST00000487068 ZNF589Q86UQ0 364 aaPredicted RBP12.15□□□□□ -0.46
NEK4-204ENST00000487068 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
NEK4-204ENST00000487068 ACER1Q8TDN7 264 aa12.15□□□□□ -0.46
NEK4-204ENST00000487068 EFCC1Q9HA90 598 aa12.15□□□□□ -0.46
NEK4-204ENST00000487068 RLFQ13129 1914 aa12.15□□□□□ -0.46
NEK4-204ENST00000487068 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
NEK4-204ENST00000487068 TSPY3P0CV98 308 aa12.14□□□□□ -0.47
NEK4-204ENST00000487068 TSPY8P0CW00 308 aa12.14□□□□□ -0.47
NEK4-204ENST00000487068 HSPD1P10809 573 aaKnown RBP12.14□□□□□ -0.47
NEK4-204ENST00000487068 GUCY1A2P33402 732 aa12.14□□□□□ -0.47
NEK4-204ENST00000487068 LACTBP83111 547 aaPredicted RBP12.14□□□□□ -0.47
NEK4-204ENST00000487068 CTDSPL2Q05D32 466 aa12.14□□□□□ -0.47
NEK4-204ENST00000487068 ZNF444Q8N0Y2 327 aaPredicted RBP12.14□□□□□ -0.47
NEK4-204ENST00000487068 ANKRD13CQ8N6S4 541 aa12.14□□□□□ -0.47
NEK4-204ENST00000487068 TANGO6Q9C0B7 1094 aa12.14□□□□□ -0.47
NEK4-204ENST00000487068 ISY1Q9ULR0 285 aaKnown RBP12.14□□□□□ -0.47
NEK4-204ENST00000487068 PLXNA1Q9UIW2 1896 aa12.13□□□□□ -0.47
NEK4-204ENST00000487068 TSPY2A6NKD2 308 aa12.13□□□□□ -0.47
NEK4-204ENST00000487068 FMNL1O95466 1100 aaPredicted RBP12.13□□□□□ -0.47
NEK4-204ENST00000487068 VCAM1P19320 739 aa12.13□□□□□ -0.47
NEK4-204ENST00000487068 RASA1P20936 1047 aa12.13□□□□□ -0.47
NEK4-204ENST00000487068 HAND2P61296 217 aa12.13□□□□□ -0.47
NEK4-204ENST00000487068 RRP12Q5JTH9 1297 aaKnown RBP12.13□□□□□ -0.47
NEK4-204ENST00000487068 RUFY2Q8WXA3 655 aa12.13□□□□□ -0.47
NEK4-204ENST00000487068 BBXQ8WY36 941 aaPredicted RBP12.13□□□□□ -0.47
NEK4-204ENST00000487068 PAGR1Q9BTK6 254 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms