RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 IFNKQ9P0W0 207 aa19.42■□□□□ 0.7
FDPS-212ENST00000487002 V9GY48 417 aaPredicted RBP19.42■□□□□ 0.7
FDPS-212ENST00000487002 CBFA2T2O43439 604 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 NFIXQ14938 502 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 ZNF804AQ7Z570 1209 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 CCDC24Q8N4L8 307 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 CCDC34Q96HJ3 373 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 ANKIB1Q9P2G1 1089 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 DACH1Q9UI36 760 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 PCDHA5Q9Y5H7 936 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 LDHBP07195 334 aaKnown RBP19.41■□□□□ 0.7
FDPS-212ENST00000487002 SKILP12757 684 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 CCDC178Q5BJE1 867 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 TNFRSF25Q93038 417 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 FERMT2Q96AC1 680 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 HSD3B7Q9H2F3 369 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 PDCL3Q9H2J4 239 aa19.41■□□□□ 0.7
FDPS-212ENST00000487002 MKRN1Q9UHC7 482 aaKnown RBP19.41■□□□□ 0.7
FDPS-212ENST00000487002 CDK5RAP2Q96SN8 1893 aa19.4■□□□□ 0.7
FDPS-212ENST00000487002 KIF5BP33176 963 aa19.4■□□□□ 0.7
FDPS-212ENST00000487002 FANCCQ00597 558 aa19.4■□□□□ 0.7
FDPS-212ENST00000487002 TSPY2A6NKD2 308 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 KCNJ6P48051 423 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 PPP4CP60510 307 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 GRIN1Q05586 938 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 C12orf60Q5U649 245 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 FOXP4Q8IVH2 680 aaPredicted RBP19.39■□□□□ 0.69
FDPS-212ENST00000487002 CERKQ8TCT0 537 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 ANKS1AQ92625 1134 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 GJD4Q96KN9 370 aaPredicted RBP19.39■□□□□ 0.69
FDPS-212ENST00000487002 MCM9Q9NXL9 1143 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 DDX60LQ5H9U9 1706 aaKnown RBP19.39■□□□□ 0.69
FDPS-212ENST00000487002 POLR2DO15514 142 aaKnown RBP19.39■□□□□ 0.69
FDPS-212ENST00000487002 ACTN4O43707 911 aaKnown RBP19.39■□□□□ 0.69
FDPS-212ENST00000487002 BAG3O95817 575 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 CYP2D6P10635 497 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 TRAPPC10P48553 1259 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 SARSP49591 514 aaKnown RBP19.39■□□□□ 0.69
FDPS-212ENST00000487002 ARID5BQ14865 1188 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 FAM196AQ6ZSG2 479 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 DGKHQ86XP1 1220 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 MLKLQ8NB16 471 aa19.39■□□□□ 0.69
FDPS-212ENST00000487002 SCG2P13521 617 aa19.38■□□□□ 0.69
FDPS-212ENST00000487002 LMOD1P29536 600 aaPredicted RBP19.38■□□□□ 0.69
FDPS-212ENST00000487002 NPY5RQ15761 445 aa19.38■□□□□ 0.69
FDPS-212ENST00000487002 TPD52L1Q16890 204 aaPredicted RBP19.38■□□□□ 0.69
FDPS-212ENST00000487002 SPECC1Q5M775 1068 aa19.38■□□□□ 0.69
FDPS-212ENST00000487002 RCSD1Q6JBY9 416 aa19.38■□□□□ 0.69
FDPS-212ENST00000487002 AMOTL1Q8IY63 956 aa19.38■□□□□ 0.69
FDPS-212ENST00000487002 SRBD1Q8N5C6 995 aaKnown RBP19.38■□□□□ 0.69
FDPS-212ENST00000487002 SMARCE1Q969G3 411 aa19.38■□□□□ 0.69
FDPS-212ENST00000487002 CSRNP2Q9H175 543 aa19.38■□□□□ 0.69
FDPS-212ENST00000487002 PAXBP1Q9Y5B6 917 aa19.38■□□□□ 0.69
FDPS-212ENST00000487002 NRDCO43847 1150 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 ONECUT3O60422 494 aaPredicted RBP19.37■□□□□ 0.69
FDPS-212ENST00000487002 LDHCP07864 332 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 PFKFB3Q16875 520 aaPredicted RBP19.37■□□□□ 0.69
FDPS-212ENST00000487002 CRY2Q49AN0 593 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 CT47A1Q5JQC4 288 aaPredicted RBP19.37■□□□□ 0.69
FDPS-212ENST00000487002 FAM47AQ5JRC9 791 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 ISM2Q6H9L7 571 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 TMC6Q7Z403 805 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 SPATA20Q8TB22 786 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 C16orf45Q96MC5 204 aaPredicted RBP19.37■□□□□ 0.69
FDPS-212ENST00000487002 SERTAD1Q9UHV2 236 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 MAN1B1Q9UKM7 699 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 LRRC37AA6NMS7 1700 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 NMT2O60551 498 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 TNNT1P13805 278 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 USP5P45974 858 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 EVX2Q03828 476 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 MORC3Q14149 939 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 PRR5LQ6MZQ0 368 aa19.37■□□□□ 0.69
FDPS-212ENST00000487002 BCL11BQ9C0K0 894 aaPredicted RBP19.37■□□□□ 0.69
FDPS-212ENST00000487002 SFPQP23246 707 aaKnown RBP eCLIP19.36■□□□□ 0.69
FDPS-212ENST00000487002 FAM182BQ5T319 152 aa19.36■□□□□ 0.69
FDPS-212ENST00000487002 RPGRQ92834 1020 aaKnown RBP19.36■□□□□ 0.69
FDPS-212ENST00000487002 KAT14Q9H8E8 782 aa19.36■□□□□ 0.69
FDPS-212ENST00000487002 SH3GLB2Q9NR46 395 aa19.36■□□□□ 0.69
FDPS-212ENST00000487002 TCP11L1Q9NUJ3 509 aa19.36■□□□□ 0.69
FDPS-212ENST00000487002 FAM205CA6NFA0 338 aa19.35■□□□□ 0.69
FDPS-212ENST00000487002 RIOK3O14730 519 aaKnown RBP19.35■□□□□ 0.69
FDPS-212ENST00000487002 FOXN1O15353 648 aa19.35■□□□□ 0.69
FDPS-212ENST00000487002 USP17L8P0C7I0 530 aa19.35■□□□□ 0.69
FDPS-212ENST00000487002 ATP2B1P20020 1258 aa19.35■□□□□ 0.69
FDPS-212ENST00000487002 BMP6P22004 513 aa19.35■□□□□ 0.69
FDPS-212ENST00000487002 EARS2Q5JPH6 523 aaKnown RBP19.35■□□□□ 0.69
FDPS-212ENST00000487002 TTC38Q5R3I4 469 aa19.35■□□□□ 0.69
FDPS-212ENST00000487002 NYAP1Q6ZVC0 841 aa19.35■□□□□ 0.69
FDPS-212ENST00000487002 ATP1A3P13637 1013 aa19.35■□□□□ 0.69
FDPS-212ENST00000487002 CALML3P27482 149 aa19.35■□□□□ 0.69
FDPS-212ENST00000487002 ATP2C1P98194 919 aaPredicted RBP19.35■□□□□ 0.69
FDPS-212ENST00000487002 JAG2Q9Y219 1238 aa19.35■□□□□ 0.69
FDPS-212ENST00000487002 hCG_1642624A0A1W2PR95 340 aa19.34■□□□□ 0.69
FDPS-212ENST00000487002 KIF2AO00139 706 aaPredicted RBP19.34■□□□□ 0.69
FDPS-212ENST00000487002 CTIFO43310 598 aaKnown RBP19.34■□□□□ 0.69
FDPS-212ENST00000487002 ATP2B4P23634 1241 aa19.34■□□□□ 0.69
FDPS-212ENST00000487002 GNAQP50148 359 aa19.34■□□□□ 0.69
FDPS-212ENST00000487002 UBASH3AP57075 661 aa19.34■□□□□ 0.69
FDPS-212ENST00000487002 ST5P78524 1137 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms